ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2TRA:A6:A7

Extra

PDB:
ATOM 1 O3' G A 5 21.476 9.011 7.206 1.00 2.67 O
ATOM 2 P A A 6 19.901 9.153 7.445 1.00 4.35 P
ATOM 3 OP1 A A 6 19.299 10.375 6.832 1.00 4.46 O
ATOM 4 OP2 A A 6 19.760 9.167 8.925 1.00 11.94 O
ATOM 5 O5' A A 6 19.262 7.837 6.817 1.00 5.68 O
ATOM 6 C5' A A 6 18.801 7.830 5.442 1.00 10.51 C
ATOM 7 C4' A A 6 18.395 6.385 5.143 1.00 5.85 C
ATOM 8 O4' A A 6 19.077 5.596 6.129 1.00 1.00 O
ATOM 9 C3' A A 6 16.913 6.089 5.322 1.00 1.17 C
ATOM 10 O3' A A 6 16.445 5.049 4.440 1.00 1.00 O
ATOM 11 C2' A A 6 16.839 5.576 6.757 1.00 3.18 C
ATOM 12 O2' A A 6 15.652 4.833 6.892 1.00 5.35 O
ATOM 13 C1' A A 6 18.142 4.819 6.877 1.00 2.51 C
ATOM 14 N9 A A 6 18.567 4.590 8.267 1.00 7.15 N
ATOM 15 C8 A A 6 19.077 5.468 9.179 1.00 12.94 C
ATOM 16 N7 A A 6 19.336 4.934 10.345 1.00 12.27 N
ATOM 17 C5 A A 6 18.973 3.605 10.196 1.00 6.29 C
ATOM 18 C6 A A 6 19.010 2.511 11.078 1.00 8.65 C
ATOM 19 N6 A A 6 19.434 2.599 12.349 1.00 13.33 N
ATOM 20 N1 A A 6 18.579 1.316 10.585 1.00 15.03 N
ATOM 21 C2 A A 6 18.142 1.229 9.299 1.00 14.76 C
ATOM 22 N3 A A 6 18.075 2.207 8.402 1.00 9.36 N
ATOM 23 C4 A A 6 18.505 3.375 8.910 1.00 6.19 C
ATOM 24 P U A 7 15.836 5.549 3.050 1.00 1.00 P
ATOM 25 OP1 U A 7 15.289 4.415 2.243 1.00 6.45 O
ATOM 26 OP2 U A 7 16.955 6.257 2.377 1.00 1.00 O
ATOM 27 O5' U A 7 14.662 6.473 3.573 1.00 1.00 O
TER

ATOM 1 O3' A B 6 16.445 5.049 4.440 1.00 1.00 O
ATOM 2 P U B 7 15.836 5.549 3.050 1.00 1.00 P
ATOM 3 OP1 U B 7 15.289 4.415 2.243 1.00 6.45 O
ATOM 4 OP2 U B 7 16.955 6.257 2.377 1.00 1.00 O
ATOM 5 O5' U B 7 14.662 6.473 3.573 1.00 1.00 O
ATOM 6 C5' U B 7 13.364 5.839 3.483 1.00 1.00 C
ATOM 7 C4' U B 7 12.355 6.932 3.752 1.00 1.00 C
ATOM 8 O4' U B 7 13.032 8.059 4.306 1.00 2.03 O
ATOM 9 C3' U B 7 11.642 7.459 2.526 1.00 1.00 C
ATOM 10 O3' U B 7 10.578 6.602 2.123 1.00 2.90 O
ATOM 11 C2' U B 7 11.211 8.836 2.990 1.00 1.00 C
ATOM 12 O2' U B 7 10.037 8.667 3.767 1.00 4.87 O
ATOM 13 C1' U B 7 12.368 9.248 3.872 1.00 1.00 C
ATOM 14 N1 U B 7 13.278 10.078 3.065 1.00 1.00 N
ATOM 15 C2 U B 7 12.786 11.286 2.616 1.00 1.00 C
ATOM 16 O2 U B 7 11.654 11.651 2.885 1.00 1.00 O
ATOM 17 N3 U B 7 13.635 12.042 1.854 1.00 6.83 N
ATOM 18 C4 U B 7 14.901 11.664 1.540 1.00 3.73 C
ATOM 19 O4 U B 7 15.596 12.440 0.837 1.00 6.39 O
ATOM 20 C5 U B 7 15.375 10.408 2.018 1.00 6.89 C
ATOM 21 C6 U B 7 14.545 9.659 2.766 1.00 5.69 C
ATOM 22 P A B 8 10.910 5.312 1.211 1.00 1.00 P
ATOM 23 OP1 A B 8 11.125 4.124 2.093 1.00 7.92 O
ATOM 24 OP2 A B 8 12.097 5.650 0.419 1.00 1.00 O
ATOM 25 O5' A B 8 9.557 5.110 0.419 1.00 1.00 O
TER

Atoms:
OP1: (19.299,10.375,6.832)
OP2: (19.760,9.167,8.925)
C3': (16.913,6.089,5.322)
C1': (18.142,4.819,6.877)
C5': (18.801,7.830,5.442)
O4': (19.077,5.596,6.129)
C8: (19.077,5.468,9.179)
O2': (15.652,4.833,6.892)
C6: (19.010,2.511,11.078)
C5: (18.973,3.605,10.196)
C4: (18.505,3.375,8.910)
P: (19.901,9.153,7.445)
C4': (18.395,6.385,5.143)
C2': (16.839,5.576,6.757)
C2: (18.142,1.229,9.299)
N1: (18.579,1.316,10.585)
N3: (18.075,2.207,8.402)
N6: (19.434,2.599,12.349)
N7: (19.336,4.934,10.345)
N9: (18.567,4.590,8.267)
O5': (19.262,7.837,6.817)
O3': (16.445,5.049,4.440)
C4: (14.901,11.664,1.540)
N3: (13.635,12.042,1.854)
OP1: (15.289,4.415,2.243)
OP2: (16.955,6.257,2.377)
C2: (12.786,11.286,2.616)
C1': (12.368,9.248,3.872)
C3': (11.642,7.459,2.526)
O5': (14.662,6.473,3.573)
O4': (13.032,8.059,4.306)
C5': (13.364,5.839,3.483)
P: (15.836,5.549,3.050)
C4': (12.355,6.932,3.752)
C2': (11.211,8.836,2.990)
O2': (10.037,8.667,3.767)
N1: (13.278,10.078,3.065)
O4: (15.596,12.440,0.837)
O2: (11.654,11.651,2.885)
C6: (14.545,9.659,2.766)
C5: (15.375,10.408,2.018)
O3': (10.578,6.602,2.123)
Image (generated by PyMOL):
PyMOL image
show in jmol