Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:E6:E7
Extra
PDB:
ATOM 1 O3' G A 5 -9.830 44.481 9.411 1.00 37.81 O
ATOM 2 P G A 6 -10.467 43.023 9.198 1.00 39.59 P
ATOM 3 OP1 G A 6 -11.903 43.179 8.850 1.00 39.02 O
ATOM 4 OP2 G A 6 -10.079 42.197 10.369 1.00 38.29 O
ATOM 5 O5' G A 6 -9.687 42.475 7.923 1.00 37.79 O
ATOM 6 C5' G A 6 -9.953 41.186 7.389 1.00 35.77 C
ATOM 7 C4' G A 6 -8.815 40.760 6.496 1.00 34.14 C
ATOM 8 O4' G A 6 -7.582 40.801 7.261 1.00 32.02 O
ATOM 9 C3' G A 6 -8.931 39.357 5.913 1.00 33.90 C
ATOM 10 O3' G A 6 -8.378 39.373 4.603 1.00 35.67 O
ATOM 11 C2' G A 6 -8.046 38.530 6.845 1.00 32.87 C
ATOM 12 O2' G A 6 -7.493 37.383 6.230 1.00 31.81 O
ATOM 13 C1' G A 6 -6.960 39.536 7.229 1.00 30.37 C
ATOM 14 N9 G A 6 -6.387 39.302 8.551 1.00 27.00 N
ATOM 15 C8 G A 6 -6.835 39.842 9.732 1.00 26.24 C
ATOM 16 N7 G A 6 -6.140 39.462 10.767 1.00 24.18 N
ATOM 17 C5 G A 6 -5.172 38.620 10.242 1.00 22.78 C
ATOM 18 C6 G A 6 -4.134 37.909 10.888 1.00 21.77 C
ATOM 19 O6 G A 6 -3.856 37.881 12.094 1.00 21.33 O
ATOM 20 N1 G A 6 -3.376 37.175 9.984 1.00 20.93 N
ATOM 21 C2 G A 6 -3.591 37.128 8.631 1.00 22.49 C
ATOM 22 N2 G A 6 -2.745 36.355 7.931 1.00 24.13 N
ATOM 23 N3 G A 6 -4.560 37.787 8.011 1.00 22.59 N
ATOM 24 C4 G A 6 -5.308 38.509 8.873 1.00 23.57 C
ATOM 25 P U A 7 -9.342 39.634 3.340 1.00 37.45 P
ATOM 26 OP1 U A 7 -8.614 39.272 2.096 1.00 37.65 O
ATOM 27 OP2 U A 7 -9.897 41.002 3.492 1.00 37.68 O
ATOM 28 O5' U A 7 -10.539 38.602 3.542 1.00 36.35 O
TER
ATOM 1 O3' G B 6 -8.378 39.373 4.603 1.00 35.67 O
ATOM 2 P U B 7 -9.342 39.634 3.340 1.00 37.45 P
ATOM 3 OP1 U B 7 -8.614 39.272 2.096 1.00 37.65 O
ATOM 4 OP2 U B 7 -9.897 41.002 3.492 1.00 37.68 O
ATOM 5 O5' U B 7 -10.539 38.602 3.542 1.00 36.35 O
ATOM 6 C5' U B 7 -10.283 37.224 3.804 1.00 35.16 C
ATOM 7 C4' U B 7 -11.433 36.376 3.314 1.00 32.97 C
ATOM 8 O4' U B 7 -12.641 36.732 4.037 1.00 33.87 O
ATOM 9 C3' U B 7 -11.807 36.567 1.854 1.00 31.29 C
ATOM 10 O3' U B 7 -10.978 35.773 1.015 1.00 28.63 O
ATOM 11 C2' U B 7 -13.255 36.095 1.831 1.00 31.66 C
ATOM 12 O2' U B 7 -13.375 34.687 1.797 1.00 30.50 O
ATOM 13 C1' U B 7 -13.763 36.619 3.176 1.00 31.54 C
ATOM 14 N1 U B 7 -14.407 37.938 3.083 1.00 30.00 N
ATOM 15 C2 U B 7 -15.696 37.989 2.591 1.00 27.96 C
ATOM 16 O2 U B 7 -16.307 36.996 2.232 1.00 25.81 O
ATOM 17 N3 U B 7 -16.245 39.248 2.534 1.00 27.35 N
ATOM 18 C4 U B 7 -15.646 40.434 2.912 1.00 28.14 C
ATOM 19 O4 U B 7 -16.273 41.488 2.812 1.00 28.62 O
ATOM 20 C5 U B 7 -14.310 40.296 3.406 1.00 29.54 C
ATOM 21 C6 U B 7 -13.750 39.083 3.473 1.00 31.12 C
ATOM 22 P C B 8 -10.332 36.420 -0.307 1.00 28.43 P
ATOM 23 OP1 C B 8 -9.383 35.435 -0.888 1.00 27.97 O
ATOM 24 OP2 C B 8 -9.851 37.782 0.047 1.00 31.63 O
ATOM 25 O5' C B 8 -11.563 36.577 -1.305 1.00 26.78 O
TER
ATOM 2 P G A 6 -10.467 43.023 9.198 1.00 39.59 P
ATOM 3 OP1 G A 6 -11.903 43.179 8.850 1.00 39.02 O
ATOM 4 OP2 G A 6 -10.079 42.197 10.369 1.00 38.29 O
ATOM 5 O5' G A 6 -9.687 42.475 7.923 1.00 37.79 O
ATOM 6 C5' G A 6 -9.953 41.186 7.389 1.00 35.77 C
ATOM 7 C4' G A 6 -8.815 40.760 6.496 1.00 34.14 C
ATOM 8 O4' G A 6 -7.582 40.801 7.261 1.00 32.02 O
ATOM 9 C3' G A 6 -8.931 39.357 5.913 1.00 33.90 C
ATOM 10 O3' G A 6 -8.378 39.373 4.603 1.00 35.67 O
ATOM 11 C2' G A 6 -8.046 38.530 6.845 1.00 32.87 C
ATOM 12 O2' G A 6 -7.493 37.383 6.230 1.00 31.81 O
ATOM 13 C1' G A 6 -6.960 39.536 7.229 1.00 30.37 C
ATOM 14 N9 G A 6 -6.387 39.302 8.551 1.00 27.00 N
ATOM 15 C8 G A 6 -6.835 39.842 9.732 1.00 26.24 C
ATOM 16 N7 G A 6 -6.140 39.462 10.767 1.00 24.18 N
ATOM 17 C5 G A 6 -5.172 38.620 10.242 1.00 22.78 C
ATOM 18 C6 G A 6 -4.134 37.909 10.888 1.00 21.77 C
ATOM 19 O6 G A 6 -3.856 37.881 12.094 1.00 21.33 O
ATOM 20 N1 G A 6 -3.376 37.175 9.984 1.00 20.93 N
ATOM 21 C2 G A 6 -3.591 37.128 8.631 1.00 22.49 C
ATOM 22 N2 G A 6 -2.745 36.355 7.931 1.00 24.13 N
ATOM 23 N3 G A 6 -4.560 37.787 8.011 1.00 22.59 N
ATOM 24 C4 G A 6 -5.308 38.509 8.873 1.00 23.57 C
ATOM 25 P U A 7 -9.342 39.634 3.340 1.00 37.45 P
ATOM 26 OP1 U A 7 -8.614 39.272 2.096 1.00 37.65 O
ATOM 27 OP2 U A 7 -9.897 41.002 3.492 1.00 37.68 O
ATOM 28 O5' U A 7 -10.539 38.602 3.542 1.00 36.35 O
TER
ATOM 1 O3' G B 6 -8.378 39.373 4.603 1.00 35.67 O
ATOM 2 P U B 7 -9.342 39.634 3.340 1.00 37.45 P
ATOM 3 OP1 U B 7 -8.614 39.272 2.096 1.00 37.65 O
ATOM 4 OP2 U B 7 -9.897 41.002 3.492 1.00 37.68 O
ATOM 5 O5' U B 7 -10.539 38.602 3.542 1.00 36.35 O
ATOM 6 C5' U B 7 -10.283 37.224 3.804 1.00 35.16 C
ATOM 7 C4' U B 7 -11.433 36.376 3.314 1.00 32.97 C
ATOM 8 O4' U B 7 -12.641 36.732 4.037 1.00 33.87 O
ATOM 9 C3' U B 7 -11.807 36.567 1.854 1.00 31.29 C
ATOM 10 O3' U B 7 -10.978 35.773 1.015 1.00 28.63 O
ATOM 11 C2' U B 7 -13.255 36.095 1.831 1.00 31.66 C
ATOM 12 O2' U B 7 -13.375 34.687 1.797 1.00 30.50 O
ATOM 13 C1' U B 7 -13.763 36.619 3.176 1.00 31.54 C
ATOM 14 N1 U B 7 -14.407 37.938 3.083 1.00 30.00 N
ATOM 15 C2 U B 7 -15.696 37.989 2.591 1.00 27.96 C
ATOM 16 O2 U B 7 -16.307 36.996 2.232 1.00 25.81 O
ATOM 17 N3 U B 7 -16.245 39.248 2.534 1.00 27.35 N
ATOM 18 C4 U B 7 -15.646 40.434 2.912 1.00 28.14 C
ATOM 19 O4 U B 7 -16.273 41.488 2.812 1.00 28.62 O
ATOM 20 C5 U B 7 -14.310 40.296 3.406 1.00 29.54 C
ATOM 21 C6 U B 7 -13.750 39.083 3.473 1.00 31.12 C
ATOM 22 P C B 8 -10.332 36.420 -0.307 1.00 28.43 P
ATOM 23 OP1 C B 8 -9.383 35.435 -0.888 1.00 27.97 O
ATOM 24 OP2 C B 8 -9.851 37.782 0.047 1.00 31.63 O
ATOM 25 O5' C B 8 -11.563 36.577 -1.305 1.00 26.78 O
TER
Atoms:
OP1: (-11.903,43.179,8.850)
OP2: (-10.079,42.197,10.369)
C3': (-8.931,39.357,5.913)
C1': (-6.960,39.536,7.229)
C5': (-9.953,41.186,7.389)
O6: (-3.856,37.881,12.094)
O4': (-7.582,40.801,7.261)
C8: (-6.835,39.842,9.732)
C2: (-3.591,37.128,8.631)
C6: (-4.134,37.909,10.888)
C5: (-5.172,38.620,10.242)
C4: (-5.308,38.509,8.873)
P: (-10.467,43.023,9.198)
C4': (-8.815,40.760,6.496)
C2': (-8.046,38.530,6.845)
O2': (-7.493,37.383,6.230)
N1: (-3.376,37.175,9.984)
N2: (-2.745,36.355,7.931)
N3: (-4.560,37.787,8.011)
N7: (-6.140,39.462,10.767)
N9: (-6.387,39.302,8.551)
O5': (-9.687,42.475,7.923)
O3': (-8.378,39.373,4.603)
OP2: (-10.079,42.197,10.369)
C3': (-8.931,39.357,5.913)
C1': (-6.960,39.536,7.229)
C5': (-9.953,41.186,7.389)
O6: (-3.856,37.881,12.094)
O4': (-7.582,40.801,7.261)
C8: (-6.835,39.842,9.732)
C2: (-3.591,37.128,8.631)
C6: (-4.134,37.909,10.888)
C5: (-5.172,38.620,10.242)
C4: (-5.308,38.509,8.873)
P: (-10.467,43.023,9.198)
C4': (-8.815,40.760,6.496)
C2': (-8.046,38.530,6.845)
O2': (-7.493,37.383,6.230)
N1: (-3.376,37.175,9.984)
N2: (-2.745,36.355,7.931)
N3: (-4.560,37.787,8.011)
N7: (-6.140,39.462,10.767)
N9: (-6.387,39.302,8.551)
O5': (-9.687,42.475,7.923)
O3': (-8.378,39.373,4.603)
C4: (-15.646,40.434,2.912)
N3: (-16.245,39.248,2.534)
OP1: (-8.614,39.272,2.096)
OP2: (-9.897,41.002,3.492)
C2: (-15.696,37.989,2.591)
C1': (-13.763,36.619,3.176)
C3': (-11.807,36.567,1.854)
O5': (-10.539,38.602,3.542)
O4': (-12.641,36.732,4.037)
C5': (-10.283,37.224,3.804)
P: (-9.342,39.634,3.340)
C4': (-11.433,36.376,3.314)
C2': (-13.255,36.095,1.831)
O2': (-13.375,34.687,1.797)
N1: (-14.407,37.938,3.083)
O4: (-16.273,41.488,2.812)
O2: (-16.307,36.996,2.232)
C6: (-13.750,39.083,3.473)
C5: (-14.310,40.296,3.406)
O3': (-10.978,35.773,1.015)
N3: (-16.245,39.248,2.534)
OP1: (-8.614,39.272,2.096)
OP2: (-9.897,41.002,3.492)
C2: (-15.696,37.989,2.591)
C1': (-13.763,36.619,3.176)
C3': (-11.807,36.567,1.854)
O5': (-10.539,38.602,3.542)
O4': (-12.641,36.732,4.037)
C5': (-10.283,37.224,3.804)
P: (-9.342,39.634,3.340)
C4': (-11.433,36.376,3.314)
C2': (-13.255,36.095,1.831)
O2': (-13.375,34.687,1.797)
N1: (-14.407,37.938,3.083)
O4: (-16.273,41.488,2.812)
O2: (-16.307,36.996,2.232)
C6: (-13.750,39.083,3.473)
C5: (-14.310,40.296,3.406)
O3': (-10.978,35.773,1.015)
Image (generated by PyMOL):