Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A408:A409
Extra
PDB:
ATOM 1 O3' C A 407 -87.216 -44.333 65.186 1.00 47.78 O
ATOM 2 P G A 408 -86.449 -42.941 65.000 1.00 51.03 P
ATOM 3 OP1 G A 408 -85.153 -43.177 64.314 1.00 64.95 O
ATOM 4 OP2 G A 408 -86.462 -42.186 66.277 1.00 59.89 O
ATOM 5 O5' G A 408 -87.444 -42.295 63.928 1.00 64.33 O
ATOM 6 C5' G A 408 -86.886 -41.358 63.042 1.00 65.84 C
ATOM 7 C4' G A 408 -87.581 -41.420 61.706 1.00 49.31 C
ATOM 8 O4' G A 408 -87.554 -42.759 61.162 1.00 51.02 O
ATOM 9 C3' G A 408 -89.040 -41.011 61.739 1.00 51.38 C
ATOM 10 O3' G A 408 -89.118 -40.103 60.666 1.00 62.94 O
ATOM 11 C2' G A 408 -89.776 -42.323 61.452 1.00 52.58 C
ATOM 12 O2' G A 408 -91.016 -42.117 60.801 1.00 70.22 O
ATOM 13 C1' G A 408 -88.779 -42.982 60.502 1.00 50.23 C
ATOM 14 N9 G A 408 -88.887 -44.427 60.282 1.00 49.75 N
ATOM 15 C8 G A 408 -88.578 -45.403 61.198 1.00 50.82 C
ATOM 16 N7 G A 408 -88.743 -46.615 60.753 1.00 44.28 N
ATOM 17 C5 G A 408 -89.180 -46.443 59.447 1.00 51.45 C
ATOM 18 C6 G A 408 -89.517 -47.417 58.471 1.00 55.23 C
ATOM 19 O6 G A 408 -89.495 -48.658 58.579 1.00 57.03 O
ATOM 20 N1 G A 408 -89.914 -46.827 57.274 1.00 51.49 N
ATOM 21 C2 G A 408 -89.977 -45.478 57.057 1.00 56.30 C
ATOM 22 N2 G A 408 -90.384 -45.105 55.837 1.00 62.69 N
ATOM 23 N3 G A 408 -89.662 -44.559 57.964 1.00 64.27 N
ATOM 24 C4 G A 408 -89.271 -45.103 59.138 1.00 53.84 C
ATOM 25 P U A 409 -89.790 -38.659 60.755 1.00 48.95 P
ATOM 26 OP1 U A 409 -91.067 -38.830 60.015 1.00 49.89 O
ATOM 27 OP2 U A 409 -88.771 -37.672 60.295 1.00 54.61 O
ATOM 28 O5' U A 409 -90.119 -38.376 62.302 1.00 49.66 O
TER
ATOM 1 O3' G B 408 -89.118 -40.103 60.666 1.00 62.94 O
ATOM 2 P U B 409 -89.790 -38.659 60.755 1.00 48.95 P
ATOM 3 OP1 U B 409 -91.067 -38.830 60.015 1.00 49.89 O
ATOM 4 OP2 U B 409 -88.771 -37.672 60.295 1.00 54.61 O
ATOM 5 O5' U B 409 -90.119 -38.376 62.302 1.00 49.66 O
ATOM 6 C5' U B 409 -91.460 -38.613 62.757 1.00 55.75 C
ATOM 7 C4' U B 409 -92.036 -37.453 63.557 1.00 63.61 C
ATOM 8 O4' U B 409 -91.314 -37.370 64.814 1.00 56.78 O
ATOM 9 C3' U B 409 -91.920 -36.080 62.880 1.00 63.77 C
ATOM 10 O3' U B 409 -92.918 -35.115 63.253 1.00 54.58 O
ATOM 11 C2' U B 409 -90.616 -35.581 63.456 1.00 55.61 C
ATOM 12 O2' U B 409 -90.625 -34.175 63.457 1.00 49.23 O
ATOM 13 C1' U B 409 -90.763 -36.074 64.890 1.00 61.51 C
ATOM 14 N1 U B 409 -89.467 -36.128 65.566 1.00 62.23 N
ATOM 15 C2 U B 409 -89.274 -35.351 66.684 1.00 70.73 C
ATOM 16 O2 U B 409 -90.141 -34.634 67.146 1.00 68.66 O
ATOM 17 N3 U B 409 -88.029 -35.449 67.249 1.00 79.91 N
ATOM 18 C4 U B 409 -86.979 -36.234 66.804 1.00 81.28 C
ATOM 19 O4 U B 409 -85.904 -36.235 67.408 1.00 85.59 O
ATOM 20 C5 U B 409 -87.273 -37.008 65.622 1.00 79.04 C
ATOM 21 C6 U B 409 -88.479 -36.931 65.050 1.00 67.82 C
ATOM 22 P G B 410 -94.469 -35.294 62.928 1.00 41.41 P
ATOM 23 OP1 G B 410 -94.609 -35.777 61.534 1.00 40.47 O
ATOM 24 OP2 G B 410 -95.152 -34.075 63.410 1.00 38.95 O
ATOM 25 O5' G B 410 -94.905 -36.460 63.925 1.00 50.14 O
TER
ATOM 2 P G A 408 -86.449 -42.941 65.000 1.00 51.03 P
ATOM 3 OP1 G A 408 -85.153 -43.177 64.314 1.00 64.95 O
ATOM 4 OP2 G A 408 -86.462 -42.186 66.277 1.00 59.89 O
ATOM 5 O5' G A 408 -87.444 -42.295 63.928 1.00 64.33 O
ATOM 6 C5' G A 408 -86.886 -41.358 63.042 1.00 65.84 C
ATOM 7 C4' G A 408 -87.581 -41.420 61.706 1.00 49.31 C
ATOM 8 O4' G A 408 -87.554 -42.759 61.162 1.00 51.02 O
ATOM 9 C3' G A 408 -89.040 -41.011 61.739 1.00 51.38 C
ATOM 10 O3' G A 408 -89.118 -40.103 60.666 1.00 62.94 O
ATOM 11 C2' G A 408 -89.776 -42.323 61.452 1.00 52.58 C
ATOM 12 O2' G A 408 -91.016 -42.117 60.801 1.00 70.22 O
ATOM 13 C1' G A 408 -88.779 -42.982 60.502 1.00 50.23 C
ATOM 14 N9 G A 408 -88.887 -44.427 60.282 1.00 49.75 N
ATOM 15 C8 G A 408 -88.578 -45.403 61.198 1.00 50.82 C
ATOM 16 N7 G A 408 -88.743 -46.615 60.753 1.00 44.28 N
ATOM 17 C5 G A 408 -89.180 -46.443 59.447 1.00 51.45 C
ATOM 18 C6 G A 408 -89.517 -47.417 58.471 1.00 55.23 C
ATOM 19 O6 G A 408 -89.495 -48.658 58.579 1.00 57.03 O
ATOM 20 N1 G A 408 -89.914 -46.827 57.274 1.00 51.49 N
ATOM 21 C2 G A 408 -89.977 -45.478 57.057 1.00 56.30 C
ATOM 22 N2 G A 408 -90.384 -45.105 55.837 1.00 62.69 N
ATOM 23 N3 G A 408 -89.662 -44.559 57.964 1.00 64.27 N
ATOM 24 C4 G A 408 -89.271 -45.103 59.138 1.00 53.84 C
ATOM 25 P U A 409 -89.790 -38.659 60.755 1.00 48.95 P
ATOM 26 OP1 U A 409 -91.067 -38.830 60.015 1.00 49.89 O
ATOM 27 OP2 U A 409 -88.771 -37.672 60.295 1.00 54.61 O
ATOM 28 O5' U A 409 -90.119 -38.376 62.302 1.00 49.66 O
TER
ATOM 1 O3' G B 408 -89.118 -40.103 60.666 1.00 62.94 O
ATOM 2 P U B 409 -89.790 -38.659 60.755 1.00 48.95 P
ATOM 3 OP1 U B 409 -91.067 -38.830 60.015 1.00 49.89 O
ATOM 4 OP2 U B 409 -88.771 -37.672 60.295 1.00 54.61 O
ATOM 5 O5' U B 409 -90.119 -38.376 62.302 1.00 49.66 O
ATOM 6 C5' U B 409 -91.460 -38.613 62.757 1.00 55.75 C
ATOM 7 C4' U B 409 -92.036 -37.453 63.557 1.00 63.61 C
ATOM 8 O4' U B 409 -91.314 -37.370 64.814 1.00 56.78 O
ATOM 9 C3' U B 409 -91.920 -36.080 62.880 1.00 63.77 C
ATOM 10 O3' U B 409 -92.918 -35.115 63.253 1.00 54.58 O
ATOM 11 C2' U B 409 -90.616 -35.581 63.456 1.00 55.61 C
ATOM 12 O2' U B 409 -90.625 -34.175 63.457 1.00 49.23 O
ATOM 13 C1' U B 409 -90.763 -36.074 64.890 1.00 61.51 C
ATOM 14 N1 U B 409 -89.467 -36.128 65.566 1.00 62.23 N
ATOM 15 C2 U B 409 -89.274 -35.351 66.684 1.00 70.73 C
ATOM 16 O2 U B 409 -90.141 -34.634 67.146 1.00 68.66 O
ATOM 17 N3 U B 409 -88.029 -35.449 67.249 1.00 79.91 N
ATOM 18 C4 U B 409 -86.979 -36.234 66.804 1.00 81.28 C
ATOM 19 O4 U B 409 -85.904 -36.235 67.408 1.00 85.59 O
ATOM 20 C5 U B 409 -87.273 -37.008 65.622 1.00 79.04 C
ATOM 21 C6 U B 409 -88.479 -36.931 65.050 1.00 67.82 C
ATOM 22 P G B 410 -94.469 -35.294 62.928 1.00 41.41 P
ATOM 23 OP1 G B 410 -94.609 -35.777 61.534 1.00 40.47 O
ATOM 24 OP2 G B 410 -95.152 -34.075 63.410 1.00 38.95 O
ATOM 25 O5' G B 410 -94.905 -36.460 63.925 1.00 50.14 O
TER
Atoms:
OP1: (-85.153,-43.177,64.314)
OP2: (-86.462,-42.186,66.277)
C3': (-89.040,-41.011,61.739)
C1': (-88.779,-42.982,60.502)
C5': (-86.886,-41.358,63.042)
O6: (-89.495,-48.658,58.579)
O4': (-87.554,-42.759,61.162)
C8: (-88.578,-45.403,61.198)
C2: (-89.977,-45.478,57.057)
C6: (-89.517,-47.417,58.471)
C5: (-89.180,-46.443,59.447)
C4: (-89.271,-45.103,59.138)
P: (-86.449,-42.941,65.000)
C4': (-87.581,-41.420,61.706)
C2': (-89.776,-42.323,61.452)
O2': (-91.016,-42.117,60.801)
N1: (-89.914,-46.827,57.274)
N2: (-90.384,-45.105,55.837)
N3: (-89.662,-44.559,57.964)
N7: (-88.743,-46.615,60.753)
N9: (-88.887,-44.427,60.282)
O5': (-87.444,-42.295,63.928)
O3': (-89.118,-40.103,60.666)
OP2: (-86.462,-42.186,66.277)
C3': (-89.040,-41.011,61.739)
C1': (-88.779,-42.982,60.502)
C5': (-86.886,-41.358,63.042)
O6: (-89.495,-48.658,58.579)
O4': (-87.554,-42.759,61.162)
C8: (-88.578,-45.403,61.198)
C2: (-89.977,-45.478,57.057)
C6: (-89.517,-47.417,58.471)
C5: (-89.180,-46.443,59.447)
C4: (-89.271,-45.103,59.138)
P: (-86.449,-42.941,65.000)
C4': (-87.581,-41.420,61.706)
C2': (-89.776,-42.323,61.452)
O2': (-91.016,-42.117,60.801)
N1: (-89.914,-46.827,57.274)
N2: (-90.384,-45.105,55.837)
N3: (-89.662,-44.559,57.964)
N7: (-88.743,-46.615,60.753)
N9: (-88.887,-44.427,60.282)
O5': (-87.444,-42.295,63.928)
O3': (-89.118,-40.103,60.666)
C4: (-86.979,-36.234,66.804)
N3: (-88.029,-35.449,67.249)
OP1: (-91.067,-38.830,60.015)
OP2: (-88.771,-37.672,60.295)
C2: (-89.274,-35.351,66.684)
C1': (-90.763,-36.074,64.890)
C3': (-91.920,-36.080,62.880)
O5': (-90.119,-38.376,62.302)
O4': (-91.314,-37.370,64.814)
C5': (-91.460,-38.613,62.757)
P: (-89.790,-38.659,60.755)
C4': (-92.036,-37.453,63.557)
C2': (-90.616,-35.581,63.456)
O2': (-90.625,-34.175,63.457)
N1: (-89.467,-36.128,65.566)
O4: (-85.904,-36.235,67.408)
O2: (-90.141,-34.634,67.146)
C6: (-88.479,-36.931,65.050)
C5: (-87.273,-37.008,65.622)
O3': (-92.918,-35.115,63.253)
N3: (-88.029,-35.449,67.249)
OP1: (-91.067,-38.830,60.015)
OP2: (-88.771,-37.672,60.295)
C2: (-89.274,-35.351,66.684)
C1': (-90.763,-36.074,64.890)
C3': (-91.920,-36.080,62.880)
O5': (-90.119,-38.376,62.302)
O4': (-91.314,-37.370,64.814)
C5': (-91.460,-38.613,62.757)
P: (-89.790,-38.659,60.755)
C4': (-92.036,-37.453,63.557)
C2': (-90.616,-35.581,63.456)
O2': (-90.625,-34.175,63.457)
N1: (-89.467,-36.128,65.566)
O4: (-85.904,-36.235,67.408)
O2: (-90.141,-34.634,67.146)
C6: (-88.479,-36.931,65.050)
C5: (-87.273,-37.008,65.622)
O3': (-92.918,-35.115,63.253)
Image (generated by PyMOL):