Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:X6:X7
Extra
PDB:
ATOM 1 O3' G A 5 115.601 -16.881 -13.574 1.00 87.76 O
ATOM 2 P G A 6 117.177 -16.721 -13.893 1.00 87.90 P
ATOM 3 OP1 G A 6 117.374 -15.391 -14.535 1.00 87.39 O
ATOM 4 OP2 G A 6 117.655 -17.943 -14.593 1.00 87.46 O
ATOM 5 O5' G A 6 117.841 -16.709 -12.441 1.00 86.12 O
ATOM 6 C5' G A 6 117.172 -16.073 -11.352 1.00 83.54 C
ATOM 7 C4' G A 6 117.548 -16.713 -10.034 1.00 81.49 C
ATOM 8 O4' G A 6 117.406 -18.142 -10.098 1.00 79.77 O
ATOM 9 C3' G A 6 118.973 -16.495 -9.559 1.00 81.49 C
ATOM 10 O3' G A 6 118.904 -15.250 -8.859 1.00 82.22 O
ATOM 11 C2' G A 6 119.241 -17.695 -8.630 1.00 80.24 C
ATOM 12 O2' G A 6 119.069 -17.386 -7.264 1.00 81.27 O
ATOM 13 C1' G A 6 118.165 -18.707 -9.053 1.00 79.11 C
ATOM 14 N9 G A 6 118.539 -20.078 -9.411 1.00 77.22 N
ATOM 15 C8 G A 6 118.297 -20.707 -10.616 1.00 77.10 C
ATOM 16 N7 G A 6 118.627 -21.973 -10.611 1.00 75.63 N
ATOM 17 C5 G A 6 119.144 -22.194 -9.338 1.00 73.51 C
ATOM 18 C6 G A 6 119.650 -23.383 -8.747 1.00 71.30 C
ATOM 19 O6 G A 6 119.728 -24.513 -9.237 1.00 69.58 O
ATOM 20 N1 G A 6 120.086 -23.162 -7.448 1.00 70.88 N
ATOM 21 C2 G A 6 120.040 -21.957 -6.792 1.00 71.40 C
ATOM 22 N2 G A 6 120.518 -21.953 -5.537 1.00 69.66 N
ATOM 23 N3 G A 6 119.562 -20.840 -7.325 1.00 72.72 N
ATOM 24 C4 G A 6 119.131 -21.029 -8.592 1.00 74.66 C
ATOM 25 P U A 7 120.240 -14.478 -8.412 1.00 83.12 P
ATOM 26 OP1 U A 7 121.144 -15.441 -7.710 1.00 82.74 O
ATOM 27 OP2 U A 7 119.739 -13.274 -7.687 1.00 82.63 O
ATOM 28 O5' U A 7 120.926 -13.973 -9.771 1.00 84.57 O
TER
ATOM 1 O3' G B 6 118.904 -15.250 -8.859 1.00 82.22 O
ATOM 2 P U B 7 120.240 -14.478 -8.412 1.00 83.12 P
ATOM 3 OP1 U B 7 121.144 -15.441 -7.710 1.00 82.74 O
ATOM 4 OP2 U B 7 119.739 -13.274 -7.687 1.00 82.63 O
ATOM 5 O5' U B 7 120.926 -13.973 -9.771 1.00 84.57 O
ATOM 6 C5' U B 7 122.358 -14.013 -9.935 1.00 85.03 C
ATOM 7 C4' U B 7 122.899 -12.741 -10.598 1.00 85.57 C
ATOM 8 O4' U B 7 122.481 -12.667 -11.987 1.00 85.84 O
ATOM 9 C3' U B 7 122.550 -11.371 -10.011 1.00 85.45 C
ATOM 10 O3' U B 7 123.389 -10.988 -8.917 1.00 85.35 O
ATOM 11 C2' U B 7 122.791 -10.430 -11.187 1.00 84.87 C
ATOM 12 O2' U B 7 124.143 -10.027 -11.295 1.00 84.12 O
ATOM 13 C1' U B 7 122.417 -11.307 -12.385 1.00 85.29 C
ATOM 14 N1 U B 7 121.073 -11.021 -12.910 1.00 84.81 N
ATOM 15 C2 U B 7 120.982 -10.148 -13.984 1.00 84.30 C
ATOM 16 O2 U B 7 121.959 -9.609 -14.490 1.00 83.04 O
ATOM 17 N3 U B 7 119.705 -9.925 -14.442 1.00 84.01 N
ATOM 18 C4 U B 7 118.534 -10.466 -13.951 1.00 83.51 C
ATOM 19 O4 U B 7 117.463 -10.191 -14.498 1.00 81.98 O
ATOM 20 C5 U B 7 118.708 -11.348 -12.833 1.00 84.29 C
ATOM 21 C6 U B 7 119.939 -11.591 -12.362 1.00 84.48 C
ATOM 22 P G B 8 122.739 -10.266 -7.629 1.00 86.80 P
ATOM 23 OP1 G B 8 122.828 -11.216 -6.478 1.00 85.65 O
ATOM 24 OP2 G B 8 121.410 -9.690 -8.006 1.00 86.77 O
ATOM 25 O5' G B 8 123.738 -9.070 -7.298 1.00 85.87 O
TER
ATOM 2 P G A 6 117.177 -16.721 -13.893 1.00 87.90 P
ATOM 3 OP1 G A 6 117.374 -15.391 -14.535 1.00 87.39 O
ATOM 4 OP2 G A 6 117.655 -17.943 -14.593 1.00 87.46 O
ATOM 5 O5' G A 6 117.841 -16.709 -12.441 1.00 86.12 O
ATOM 6 C5' G A 6 117.172 -16.073 -11.352 1.00 83.54 C
ATOM 7 C4' G A 6 117.548 -16.713 -10.034 1.00 81.49 C
ATOM 8 O4' G A 6 117.406 -18.142 -10.098 1.00 79.77 O
ATOM 9 C3' G A 6 118.973 -16.495 -9.559 1.00 81.49 C
ATOM 10 O3' G A 6 118.904 -15.250 -8.859 1.00 82.22 O
ATOM 11 C2' G A 6 119.241 -17.695 -8.630 1.00 80.24 C
ATOM 12 O2' G A 6 119.069 -17.386 -7.264 1.00 81.27 O
ATOM 13 C1' G A 6 118.165 -18.707 -9.053 1.00 79.11 C
ATOM 14 N9 G A 6 118.539 -20.078 -9.411 1.00 77.22 N
ATOM 15 C8 G A 6 118.297 -20.707 -10.616 1.00 77.10 C
ATOM 16 N7 G A 6 118.627 -21.973 -10.611 1.00 75.63 N
ATOM 17 C5 G A 6 119.144 -22.194 -9.338 1.00 73.51 C
ATOM 18 C6 G A 6 119.650 -23.383 -8.747 1.00 71.30 C
ATOM 19 O6 G A 6 119.728 -24.513 -9.237 1.00 69.58 O
ATOM 20 N1 G A 6 120.086 -23.162 -7.448 1.00 70.88 N
ATOM 21 C2 G A 6 120.040 -21.957 -6.792 1.00 71.40 C
ATOM 22 N2 G A 6 120.518 -21.953 -5.537 1.00 69.66 N
ATOM 23 N3 G A 6 119.562 -20.840 -7.325 1.00 72.72 N
ATOM 24 C4 G A 6 119.131 -21.029 -8.592 1.00 74.66 C
ATOM 25 P U A 7 120.240 -14.478 -8.412 1.00 83.12 P
ATOM 26 OP1 U A 7 121.144 -15.441 -7.710 1.00 82.74 O
ATOM 27 OP2 U A 7 119.739 -13.274 -7.687 1.00 82.63 O
ATOM 28 O5' U A 7 120.926 -13.973 -9.771 1.00 84.57 O
TER
ATOM 1 O3' G B 6 118.904 -15.250 -8.859 1.00 82.22 O
ATOM 2 P U B 7 120.240 -14.478 -8.412 1.00 83.12 P
ATOM 3 OP1 U B 7 121.144 -15.441 -7.710 1.00 82.74 O
ATOM 4 OP2 U B 7 119.739 -13.274 -7.687 1.00 82.63 O
ATOM 5 O5' U B 7 120.926 -13.973 -9.771 1.00 84.57 O
ATOM 6 C5' U B 7 122.358 -14.013 -9.935 1.00 85.03 C
ATOM 7 C4' U B 7 122.899 -12.741 -10.598 1.00 85.57 C
ATOM 8 O4' U B 7 122.481 -12.667 -11.987 1.00 85.84 O
ATOM 9 C3' U B 7 122.550 -11.371 -10.011 1.00 85.45 C
ATOM 10 O3' U B 7 123.389 -10.988 -8.917 1.00 85.35 O
ATOM 11 C2' U B 7 122.791 -10.430 -11.187 1.00 84.87 C
ATOM 12 O2' U B 7 124.143 -10.027 -11.295 1.00 84.12 O
ATOM 13 C1' U B 7 122.417 -11.307 -12.385 1.00 85.29 C
ATOM 14 N1 U B 7 121.073 -11.021 -12.910 1.00 84.81 N
ATOM 15 C2 U B 7 120.982 -10.148 -13.984 1.00 84.30 C
ATOM 16 O2 U B 7 121.959 -9.609 -14.490 1.00 83.04 O
ATOM 17 N3 U B 7 119.705 -9.925 -14.442 1.00 84.01 N
ATOM 18 C4 U B 7 118.534 -10.466 -13.951 1.00 83.51 C
ATOM 19 O4 U B 7 117.463 -10.191 -14.498 1.00 81.98 O
ATOM 20 C5 U B 7 118.708 -11.348 -12.833 1.00 84.29 C
ATOM 21 C6 U B 7 119.939 -11.591 -12.362 1.00 84.48 C
ATOM 22 P G B 8 122.739 -10.266 -7.629 1.00 86.80 P
ATOM 23 OP1 G B 8 122.828 -11.216 -6.478 1.00 85.65 O
ATOM 24 OP2 G B 8 121.410 -9.690 -8.006 1.00 86.77 O
ATOM 25 O5' G B 8 123.738 -9.070 -7.298 1.00 85.87 O
TER
Atoms:
OP1: (117.374,-15.391,-14.535)
OP2: (117.655,-17.943,-14.593)
C3': (118.973,-16.495,-9.559)
C1': (118.165,-18.707,-9.053)
C5': (117.172,-16.073,-11.352)
O6: (119.728,-24.513,-9.237)
O4': (117.406,-18.142,-10.098)
C8: (118.297,-20.707,-10.616)
C2: (120.040,-21.957,-6.792)
C6: (119.650,-23.383,-8.747)
C5: (119.144,-22.194,-9.338)
C4: (119.131,-21.029,-8.592)
P: (117.177,-16.721,-13.893)
C4': (117.548,-16.713,-10.034)
C2': (119.241,-17.695,-8.630)
O2': (119.069,-17.386,-7.264)
N1: (120.086,-23.162,-7.448)
N2: (120.518,-21.953,-5.537)
N3: (119.562,-20.840,-7.325)
N7: (118.627,-21.973,-10.611)
N9: (118.539,-20.078,-9.411)
O5': (117.841,-16.709,-12.441)
O3': (118.904,-15.250,-8.859)
OP2: (117.655,-17.943,-14.593)
C3': (118.973,-16.495,-9.559)
C1': (118.165,-18.707,-9.053)
C5': (117.172,-16.073,-11.352)
O6: (119.728,-24.513,-9.237)
O4': (117.406,-18.142,-10.098)
C8: (118.297,-20.707,-10.616)
C2: (120.040,-21.957,-6.792)
C6: (119.650,-23.383,-8.747)
C5: (119.144,-22.194,-9.338)
C4: (119.131,-21.029,-8.592)
P: (117.177,-16.721,-13.893)
C4': (117.548,-16.713,-10.034)
C2': (119.241,-17.695,-8.630)
O2': (119.069,-17.386,-7.264)
N1: (120.086,-23.162,-7.448)
N2: (120.518,-21.953,-5.537)
N3: (119.562,-20.840,-7.325)
N7: (118.627,-21.973,-10.611)
N9: (118.539,-20.078,-9.411)
O5': (117.841,-16.709,-12.441)
O3': (118.904,-15.250,-8.859)
C4: (118.534,-10.466,-13.951)
N3: (119.705,-9.925,-14.442)
OP1: (121.144,-15.441,-7.710)
OP2: (119.739,-13.274,-7.687)
C2: (120.982,-10.148,-13.984)
C1': (122.417,-11.307,-12.385)
C3': (122.550,-11.371,-10.011)
O5': (120.926,-13.973,-9.771)
O4': (122.481,-12.667,-11.987)
C5': (122.358,-14.013,-9.935)
P: (120.240,-14.478,-8.412)
C4': (122.899,-12.741,-10.598)
C2': (122.791,-10.430,-11.187)
O2': (124.143,-10.027,-11.295)
N1: (121.073,-11.021,-12.910)
O4: (117.463,-10.191,-14.498)
O2: (121.959,-9.609,-14.490)
C6: (119.939,-11.591,-12.362)
C5: (118.708,-11.348,-12.833)
O3': (123.389,-10.988,-8.917)
N3: (119.705,-9.925,-14.442)
OP1: (121.144,-15.441,-7.710)
OP2: (119.739,-13.274,-7.687)
C2: (120.982,-10.148,-13.984)
C1': (122.417,-11.307,-12.385)
C3': (122.550,-11.371,-10.011)
O5': (120.926,-13.973,-9.771)
O4': (122.481,-12.667,-11.987)
C5': (122.358,-14.013,-9.935)
P: (120.240,-14.478,-8.412)
C4': (122.899,-12.741,-10.598)
C2': (122.791,-10.430,-11.187)
O2': (124.143,-10.027,-11.295)
N1: (121.073,-11.021,-12.910)
O4: (117.463,-10.191,-14.498)
O2: (121.959,-9.609,-14.490)
C6: (119.939,-11.591,-12.362)
C5: (118.708,-11.348,-12.833)
O3': (123.389,-10.988,-8.917)
Image (generated by PyMOL):