Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12467:12468
Extra
PDB:
ATOM 1 O3' G A2466 24.314 -70.923 58.834 1.00 55.16 O
ATOM 2 P A A2467 23.139 -69.895 59.078 1.00 54.34 P
ATOM 3 OP1 A A2467 21.952 -70.678 59.426 1.00 54.70 O
ATOM 4 OP2 A A2467 23.115 -69.005 57.882 1.00 54.10 O
ATOM 5 O5' A A2467 23.602 -69.079 60.360 1.00 53.91 O
ATOM 6 C5' A A2467 24.594 -68.068 60.285 1.00 53.47 C
ATOM 7 C4' A A2467 24.499 -67.115 61.447 1.00 53.06 C
ATOM 8 O4' A A2467 23.309 -66.294 61.298 1.00 52.85 O
ATOM 9 C3' A A2467 24.383 -67.767 62.816 1.00 53.23 C
ATOM 10 O3' A A2467 24.914 -66.877 63.794 1.00 52.83 O
ATOM 11 C2' A A2467 22.876 -67.826 62.999 1.00 53.34 C
ATOM 12 O2' A A2467 22.464 -67.958 64.332 1.00 53.36 O
ATOM 13 C1' A A2467 22.474 -66.479 62.423 1.00 52.92 C
ATOM 14 N9 A A2467 21.087 -66.382 61.971 1.00 53.01 N
ATOM 15 C8 A A2467 20.516 -67.031 60.884 1.00 53.36 C
ATOM 16 N7 A A2467 19.264 -66.680 60.655 1.00 53.36 N
ATOM 17 C5 A A2467 18.997 -65.720 61.640 1.00 52.98 C
ATOM 18 C6 A A2467 17.866 -64.962 61.949 1.00 52.80 C
ATOM 19 N6 A A2467 16.734 -65.052 61.276 1.00 52.98 N
ATOM 20 N1 A A2467 17.921 -64.106 62.982 1.00 52.44 N
ATOM 21 C2 A A2467 19.049 -63.999 63.666 1.00 52.27 C
ATOM 22 N3 A A2467 20.179 -64.649 63.469 1.00 52.40 N
ATOM 23 C4 A A2467 20.110 -65.507 62.440 1.00 52.76 C
ATOM 24 P U A2468 26.495 -66.823 64.114 1.00 49.61 P
ATOM 25 OP1 U A2468 26.698 -65.682 65.061 1.00 49.16 O
ATOM 26 OP2 U A2468 27.220 -66.816 62.804 1.00 49.63 O
ATOM 27 O5' U A2468 26.763 -68.211 64.869 1.00 50.07 O
TER
ATOM 1 O3' A B2467 24.914 -66.877 63.794 1.00 52.83 O
ATOM 2 P U B2468 26.495 -66.823 64.114 1.00 49.61 P
ATOM 3 OP1 U B2468 26.698 -65.682 65.061 1.00 49.16 O
ATOM 4 OP2 U B2468 27.220 -66.816 62.804 1.00 49.63 O
ATOM 5 O5' U B2468 26.763 -68.211 64.869 1.00 50.07 O
ATOM 6 C5' U B2468 25.929 -68.633 65.944 1.00 50.24 C
ATOM 7 C4' U B2468 26.340 -69.982 66.464 1.00 50.71 C
ATOM 8 O4' U B2468 26.303 -70.955 65.407 1.00 51.11 O
ATOM 9 C3' U B2468 27.748 -70.093 66.954 1.00 50.67 C
ATOM 10 O3' U B2468 27.922 -69.509 68.214 1.00 50.42 O
ATOM 11 C2' U B2468 27.953 -71.590 66.949 1.00 51.24 C
ATOM 12 O2' U B2468 27.241 -72.175 68.024 1.00 51.48 O
ATOM 13 C1' U B2468 27.239 -71.969 65.671 1.00 51.45 C
ATOM 14 N1 U B2468 28.144 -72.077 64.529 1.00 51.49 N
ATOM 15 C2 U B2468 28.999 -73.145 64.494 1.00 51.88 C
ATOM 16 O2 U B2468 29.073 -73.946 65.374 1.00 52.17 O
ATOM 17 N3 U B2468 29.812 -73.255 63.407 1.00 51.94 N
ATOM 18 C4 U B2468 29.834 -72.381 62.352 1.00 51.64 C
ATOM 19 O4 U B2468 30.623 -72.594 61.446 1.00 51.74 O
ATOM 20 C5 U B2468 28.910 -71.306 62.436 1.00 51.25 C
ATOM 21 C6 U B2468 28.104 -71.192 63.492 1.00 51.19 C
ATOM 22 P U B2469 29.244 -68.674 68.524 1.00 57.94 P
ATOM 23 OP1 U B2469 29.070 -68.091 69.870 1.00 57.72 O
ATOM 24 OP2 U B2469 29.469 -67.770 67.376 1.00 57.62 O
ATOM 25 O5' U B2469 30.347 -69.803 68.573 1.00 58.33 O
TER
ATOM 2 P A A2467 23.139 -69.895 59.078 1.00 54.34 P
ATOM 3 OP1 A A2467 21.952 -70.678 59.426 1.00 54.70 O
ATOM 4 OP2 A A2467 23.115 -69.005 57.882 1.00 54.10 O
ATOM 5 O5' A A2467 23.602 -69.079 60.360 1.00 53.91 O
ATOM 6 C5' A A2467 24.594 -68.068 60.285 1.00 53.47 C
ATOM 7 C4' A A2467 24.499 -67.115 61.447 1.00 53.06 C
ATOM 8 O4' A A2467 23.309 -66.294 61.298 1.00 52.85 O
ATOM 9 C3' A A2467 24.383 -67.767 62.816 1.00 53.23 C
ATOM 10 O3' A A2467 24.914 -66.877 63.794 1.00 52.83 O
ATOM 11 C2' A A2467 22.876 -67.826 62.999 1.00 53.34 C
ATOM 12 O2' A A2467 22.464 -67.958 64.332 1.00 53.36 O
ATOM 13 C1' A A2467 22.474 -66.479 62.423 1.00 52.92 C
ATOM 14 N9 A A2467 21.087 -66.382 61.971 1.00 53.01 N
ATOM 15 C8 A A2467 20.516 -67.031 60.884 1.00 53.36 C
ATOM 16 N7 A A2467 19.264 -66.680 60.655 1.00 53.36 N
ATOM 17 C5 A A2467 18.997 -65.720 61.640 1.00 52.98 C
ATOM 18 C6 A A2467 17.866 -64.962 61.949 1.00 52.80 C
ATOM 19 N6 A A2467 16.734 -65.052 61.276 1.00 52.98 N
ATOM 20 N1 A A2467 17.921 -64.106 62.982 1.00 52.44 N
ATOM 21 C2 A A2467 19.049 -63.999 63.666 1.00 52.27 C
ATOM 22 N3 A A2467 20.179 -64.649 63.469 1.00 52.40 N
ATOM 23 C4 A A2467 20.110 -65.507 62.440 1.00 52.76 C
ATOM 24 P U A2468 26.495 -66.823 64.114 1.00 49.61 P
ATOM 25 OP1 U A2468 26.698 -65.682 65.061 1.00 49.16 O
ATOM 26 OP2 U A2468 27.220 -66.816 62.804 1.00 49.63 O
ATOM 27 O5' U A2468 26.763 -68.211 64.869 1.00 50.07 O
TER
ATOM 1 O3' A B2467 24.914 -66.877 63.794 1.00 52.83 O
ATOM 2 P U B2468 26.495 -66.823 64.114 1.00 49.61 P
ATOM 3 OP1 U B2468 26.698 -65.682 65.061 1.00 49.16 O
ATOM 4 OP2 U B2468 27.220 -66.816 62.804 1.00 49.63 O
ATOM 5 O5' U B2468 26.763 -68.211 64.869 1.00 50.07 O
ATOM 6 C5' U B2468 25.929 -68.633 65.944 1.00 50.24 C
ATOM 7 C4' U B2468 26.340 -69.982 66.464 1.00 50.71 C
ATOM 8 O4' U B2468 26.303 -70.955 65.407 1.00 51.11 O
ATOM 9 C3' U B2468 27.748 -70.093 66.954 1.00 50.67 C
ATOM 10 O3' U B2468 27.922 -69.509 68.214 1.00 50.42 O
ATOM 11 C2' U B2468 27.953 -71.590 66.949 1.00 51.24 C
ATOM 12 O2' U B2468 27.241 -72.175 68.024 1.00 51.48 O
ATOM 13 C1' U B2468 27.239 -71.969 65.671 1.00 51.45 C
ATOM 14 N1 U B2468 28.144 -72.077 64.529 1.00 51.49 N
ATOM 15 C2 U B2468 28.999 -73.145 64.494 1.00 51.88 C
ATOM 16 O2 U B2468 29.073 -73.946 65.374 1.00 52.17 O
ATOM 17 N3 U B2468 29.812 -73.255 63.407 1.00 51.94 N
ATOM 18 C4 U B2468 29.834 -72.381 62.352 1.00 51.64 C
ATOM 19 O4 U B2468 30.623 -72.594 61.446 1.00 51.74 O
ATOM 20 C5 U B2468 28.910 -71.306 62.436 1.00 51.25 C
ATOM 21 C6 U B2468 28.104 -71.192 63.492 1.00 51.19 C
ATOM 22 P U B2469 29.244 -68.674 68.524 1.00 57.94 P
ATOM 23 OP1 U B2469 29.070 -68.091 69.870 1.00 57.72 O
ATOM 24 OP2 U B2469 29.469 -67.770 67.376 1.00 57.62 O
ATOM 25 O5' U B2469 30.347 -69.803 68.573 1.00 58.33 O
TER
Atoms:
OP1: (21.952,-70.678,59.426)
OP2: (23.115,-69.005,57.882)
C3': (24.383,-67.767,62.816)
C1': (22.474,-66.479,62.423)
C5': (24.594,-68.068,60.285)
O4': (23.309,-66.294,61.298)
C8: (20.516,-67.031,60.884)
O2': (22.464,-67.958,64.332)
C6: (17.866,-64.962,61.949)
C5: (18.997,-65.720,61.640)
C4: (20.110,-65.507,62.440)
P: (23.139,-69.895,59.078)
C4': (24.499,-67.115,61.447)
C2': (22.876,-67.826,62.999)
C2: (19.049,-63.999,63.666)
N1: (17.921,-64.106,62.982)
N3: (20.179,-64.649,63.469)
N6: (16.734,-65.052,61.276)
N7: (19.264,-66.680,60.655)
N9: (21.087,-66.382,61.971)
O5': (23.602,-69.079,60.360)
O3': (24.914,-66.877,63.794)
OP2: (23.115,-69.005,57.882)
C3': (24.383,-67.767,62.816)
C1': (22.474,-66.479,62.423)
C5': (24.594,-68.068,60.285)
O4': (23.309,-66.294,61.298)
C8: (20.516,-67.031,60.884)
O2': (22.464,-67.958,64.332)
C6: (17.866,-64.962,61.949)
C5: (18.997,-65.720,61.640)
C4: (20.110,-65.507,62.440)
P: (23.139,-69.895,59.078)
C4': (24.499,-67.115,61.447)
C2': (22.876,-67.826,62.999)
C2: (19.049,-63.999,63.666)
N1: (17.921,-64.106,62.982)
N3: (20.179,-64.649,63.469)
N6: (16.734,-65.052,61.276)
N7: (19.264,-66.680,60.655)
N9: (21.087,-66.382,61.971)
O5': (23.602,-69.079,60.360)
O3': (24.914,-66.877,63.794)
C4: (29.834,-72.381,62.352)
N3: (29.812,-73.255,63.407)
OP1: (26.698,-65.682,65.061)
OP2: (27.220,-66.816,62.804)
C2: (28.999,-73.145,64.494)
C1': (27.239,-71.969,65.671)
C3': (27.748,-70.093,66.954)
O5': (26.763,-68.211,64.869)
O4': (26.303,-70.955,65.407)
C5': (25.929,-68.633,65.944)
P: (26.495,-66.823,64.114)
C4': (26.340,-69.982,66.464)
C2': (27.953,-71.590,66.949)
O2': (27.241,-72.175,68.024)
N1: (28.144,-72.077,64.529)
O4: (30.623,-72.594,61.446)
O2: (29.073,-73.946,65.374)
C6: (28.104,-71.192,63.492)
C5: (28.910,-71.306,62.436)
O3': (27.922,-69.509,68.214)
N3: (29.812,-73.255,63.407)
OP1: (26.698,-65.682,65.061)
OP2: (27.220,-66.816,62.804)
C2: (28.999,-73.145,64.494)
C1': (27.239,-71.969,65.671)
C3': (27.748,-70.093,66.954)
O5': (26.763,-68.211,64.869)
O4': (26.303,-70.955,65.407)
C5': (25.929,-68.633,65.944)
P: (26.495,-66.823,64.114)
C4': (26.340,-69.982,66.464)
C2': (27.953,-71.590,66.949)
O2': (27.241,-72.175,68.024)
N1: (28.144,-72.077,64.529)
O4: (30.623,-72.594,61.446)
O2: (29.073,-73.946,65.374)
C6: (28.104,-71.192,63.492)
C5: (28.910,-71.306,62.436)
O3': (27.922,-69.509,68.214)
Image (generated by PyMOL):