Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:G6:G7
Extra
PDB:
ATOM 1 O3' G A 5 13.683 28.391 -5.333 1.00 55.12 O
ATOM 2 P G A 6 14.326 28.726 -3.902 1.00 53.48 P
ATOM 3 OP1 G A 6 15.751 29.094 -4.101 1.00 54.25 O
ATOM 4 OP2 G A 6 13.976 27.607 -2.989 1.00 52.91 O
ATOM 5 O5' G A 6 13.533 30.023 -3.431 1.00 49.63 O
ATOM 6 C5' G A 6 13.795 30.625 -2.172 1.00 43.82 C
ATOM 7 C4' G A 6 12.661 31.544 -1.794 1.00 41.01 C
ATOM 8 O4' G A 6 11.413 30.807 -1.860 1.00 39.25 O
ATOM 9 C3' G A 6 12.757 32.135 -0.393 1.00 39.54 C
ATOM 10 O3' G A 6 12.234 33.455 -0.439 1.00 38.82 O
ATOM 11 C2' G A 6 11.831 31.230 0.418 1.00 39.05 C
ATOM 12 O2' G A 6 11.264 31.870 1.543 1.00 37.06 O
ATOM 13 C1' G A 6 10.762 30.861 -0.611 1.00 39.49 C
ATOM 14 N9 G A 6 10.155 29.552 -0.387 1.00 42.22 N
ATOM 15 C8 G A 6 10.654 28.348 -0.823 1.00 43.45 C
ATOM 16 N7 G A 6 9.913 27.330 -0.484 1.00 44.05 N
ATOM 17 C5 G A 6 8.859 27.891 0.221 1.00 43.16 C
ATOM 18 C6 G A 6 7.742 27.276 0.834 1.00 44.25 C
ATOM 19 O6 G A 6 7.453 26.074 0.874 1.00 43.64 O
ATOM 20 N1 G A 6 6.914 28.210 1.444 1.00 45.60 N
ATOM 21 C2 G A 6 7.131 29.565 1.463 1.00 44.37 C
ATOM 22 N2 G A 6 6.209 30.296 2.111 1.00 44.27 N
ATOM 23 N3 G A 6 8.172 30.157 0.891 1.00 44.39 N
ATOM 24 C4 G A 6 8.991 29.264 0.292 1.00 43.12 C
ATOM 25 P U A 7 13.215 34.681 -0.792 1.00 36.76 P
ATOM 26 OP1 U A 7 12.497 35.956 -0.536 1.00 37.92 O
ATOM 27 OP2 U A 7 13.780 34.416 -2.139 1.00 36.21 O
ATOM 28 O5' U A 7 14.401 34.547 0.264 1.00 36.33 O
TER
ATOM 1 O3' G B 6 12.234 33.455 -0.439 1.00 38.82 O
ATOM 2 P U B 7 13.215 34.681 -0.792 1.00 36.76 P
ATOM 3 OP1 U B 7 12.497 35.956 -0.536 1.00 37.92 O
ATOM 4 OP2 U B 7 13.780 34.416 -2.139 1.00 36.21 O
ATOM 5 O5' U B 7 14.401 34.547 0.264 1.00 36.33 O
ATOM 6 C5' U B 7 14.135 34.492 1.663 1.00 37.95 C
ATOM 7 C4' U B 7 15.177 35.277 2.425 1.00 38.85 C
ATOM 8 O4' U B 7 16.480 34.665 2.238 1.00 39.50 O
ATOM 9 C3' U B 7 15.374 36.713 1.967 1.00 39.60 C
ATOM 10 O3' U B 7 14.415 37.570 2.576 1.00 36.62 O
ATOM 11 C2' U B 7 16.787 37.017 2.452 1.00 39.84 C
ATOM 12 O2' U B 7 16.828 37.365 3.821 1.00 41.40 O
ATOM 13 C1' U B 7 17.482 35.669 2.242 1.00 39.84 C
ATOM 14 N1 U B 7 18.243 35.576 0.987 1.00 40.40 N
ATOM 15 C2 U B 7 19.466 36.221 0.930 1.00 40.84 C
ATOM 16 O2 U B 7 19.922 36.857 1.864 1.00 40.28 O
ATOM 17 N3 U B 7 20.134 36.092 -0.264 1.00 40.73 N
ATOM 18 C4 U B 7 19.715 35.401 -1.382 1.00 40.43 C
ATOM 19 O4 U B 7 20.434 35.372 -2.381 1.00 38.55 O
ATOM 20 C5 U B 7 18.439 34.765 -1.245 1.00 41.57 C
ATOM 21 C6 U B 7 17.763 34.872 -0.094 1.00 41.59 C
ATOM 22 P C B 8 13.804 38.802 1.746 1.00 35.33 P
ATOM 23 OP1 C B 8 12.720 39.416 2.557 1.00 35.89 O
ATOM 24 OP2 C B 8 13.510 38.325 0.369 1.00 35.36 O
ATOM 25 O5' C B 8 15.006 39.843 1.659 1.00 36.80 O
TER
ATOM 2 P G A 6 14.326 28.726 -3.902 1.00 53.48 P
ATOM 3 OP1 G A 6 15.751 29.094 -4.101 1.00 54.25 O
ATOM 4 OP2 G A 6 13.976 27.607 -2.989 1.00 52.91 O
ATOM 5 O5' G A 6 13.533 30.023 -3.431 1.00 49.63 O
ATOM 6 C5' G A 6 13.795 30.625 -2.172 1.00 43.82 C
ATOM 7 C4' G A 6 12.661 31.544 -1.794 1.00 41.01 C
ATOM 8 O4' G A 6 11.413 30.807 -1.860 1.00 39.25 O
ATOM 9 C3' G A 6 12.757 32.135 -0.393 1.00 39.54 C
ATOM 10 O3' G A 6 12.234 33.455 -0.439 1.00 38.82 O
ATOM 11 C2' G A 6 11.831 31.230 0.418 1.00 39.05 C
ATOM 12 O2' G A 6 11.264 31.870 1.543 1.00 37.06 O
ATOM 13 C1' G A 6 10.762 30.861 -0.611 1.00 39.49 C
ATOM 14 N9 G A 6 10.155 29.552 -0.387 1.00 42.22 N
ATOM 15 C8 G A 6 10.654 28.348 -0.823 1.00 43.45 C
ATOM 16 N7 G A 6 9.913 27.330 -0.484 1.00 44.05 N
ATOM 17 C5 G A 6 8.859 27.891 0.221 1.00 43.16 C
ATOM 18 C6 G A 6 7.742 27.276 0.834 1.00 44.25 C
ATOM 19 O6 G A 6 7.453 26.074 0.874 1.00 43.64 O
ATOM 20 N1 G A 6 6.914 28.210 1.444 1.00 45.60 N
ATOM 21 C2 G A 6 7.131 29.565 1.463 1.00 44.37 C
ATOM 22 N2 G A 6 6.209 30.296 2.111 1.00 44.27 N
ATOM 23 N3 G A 6 8.172 30.157 0.891 1.00 44.39 N
ATOM 24 C4 G A 6 8.991 29.264 0.292 1.00 43.12 C
ATOM 25 P U A 7 13.215 34.681 -0.792 1.00 36.76 P
ATOM 26 OP1 U A 7 12.497 35.956 -0.536 1.00 37.92 O
ATOM 27 OP2 U A 7 13.780 34.416 -2.139 1.00 36.21 O
ATOM 28 O5' U A 7 14.401 34.547 0.264 1.00 36.33 O
TER
ATOM 1 O3' G B 6 12.234 33.455 -0.439 1.00 38.82 O
ATOM 2 P U B 7 13.215 34.681 -0.792 1.00 36.76 P
ATOM 3 OP1 U B 7 12.497 35.956 -0.536 1.00 37.92 O
ATOM 4 OP2 U B 7 13.780 34.416 -2.139 1.00 36.21 O
ATOM 5 O5' U B 7 14.401 34.547 0.264 1.00 36.33 O
ATOM 6 C5' U B 7 14.135 34.492 1.663 1.00 37.95 C
ATOM 7 C4' U B 7 15.177 35.277 2.425 1.00 38.85 C
ATOM 8 O4' U B 7 16.480 34.665 2.238 1.00 39.50 O
ATOM 9 C3' U B 7 15.374 36.713 1.967 1.00 39.60 C
ATOM 10 O3' U B 7 14.415 37.570 2.576 1.00 36.62 O
ATOM 11 C2' U B 7 16.787 37.017 2.452 1.00 39.84 C
ATOM 12 O2' U B 7 16.828 37.365 3.821 1.00 41.40 O
ATOM 13 C1' U B 7 17.482 35.669 2.242 1.00 39.84 C
ATOM 14 N1 U B 7 18.243 35.576 0.987 1.00 40.40 N
ATOM 15 C2 U B 7 19.466 36.221 0.930 1.00 40.84 C
ATOM 16 O2 U B 7 19.922 36.857 1.864 1.00 40.28 O
ATOM 17 N3 U B 7 20.134 36.092 -0.264 1.00 40.73 N
ATOM 18 C4 U B 7 19.715 35.401 -1.382 1.00 40.43 C
ATOM 19 O4 U B 7 20.434 35.372 -2.381 1.00 38.55 O
ATOM 20 C5 U B 7 18.439 34.765 -1.245 1.00 41.57 C
ATOM 21 C6 U B 7 17.763 34.872 -0.094 1.00 41.59 C
ATOM 22 P C B 8 13.804 38.802 1.746 1.00 35.33 P
ATOM 23 OP1 C B 8 12.720 39.416 2.557 1.00 35.89 O
ATOM 24 OP2 C B 8 13.510 38.325 0.369 1.00 35.36 O
ATOM 25 O5' C B 8 15.006 39.843 1.659 1.00 36.80 O
TER
Atoms:
OP1: (15.751,29.094,-4.101)
OP2: (13.976,27.607,-2.989)
C3': (12.757,32.135,-0.393)
C1': (10.762,30.861,-0.611)
C5': (13.795,30.625,-2.172)
O6: (7.453,26.074,0.874)
O4': (11.413,30.807,-1.860)
C8: (10.654,28.348,-0.823)
C2: (7.131,29.565,1.463)
C6: (7.742,27.276,0.834)
C5: (8.859,27.891,0.221)
C4: (8.991,29.264,0.292)
P: (14.326,28.726,-3.902)
C4': (12.661,31.544,-1.794)
C2': (11.831,31.230,0.418)
O2': (11.264,31.870,1.543)
N1: (6.914,28.210,1.444)
N2: (6.209,30.296,2.111)
N3: (8.172,30.157,0.891)
N7: (9.913,27.330,-0.484)
N9: (10.155,29.552,-0.387)
O5': (13.533,30.023,-3.431)
O3': (12.234,33.455,-0.439)
OP2: (13.976,27.607,-2.989)
C3': (12.757,32.135,-0.393)
C1': (10.762,30.861,-0.611)
C5': (13.795,30.625,-2.172)
O6: (7.453,26.074,0.874)
O4': (11.413,30.807,-1.860)
C8: (10.654,28.348,-0.823)
C2: (7.131,29.565,1.463)
C6: (7.742,27.276,0.834)
C5: (8.859,27.891,0.221)
C4: (8.991,29.264,0.292)
P: (14.326,28.726,-3.902)
C4': (12.661,31.544,-1.794)
C2': (11.831,31.230,0.418)
O2': (11.264,31.870,1.543)
N1: (6.914,28.210,1.444)
N2: (6.209,30.296,2.111)
N3: (8.172,30.157,0.891)
N7: (9.913,27.330,-0.484)
N9: (10.155,29.552,-0.387)
O5': (13.533,30.023,-3.431)
O3': (12.234,33.455,-0.439)
C4: (19.715,35.401,-1.382)
N3: (20.134,36.092,-0.264)
OP1: (12.497,35.956,-0.536)
OP2: (13.780,34.416,-2.139)
C2: (19.466,36.221,0.930)
C1': (17.482,35.669,2.242)
C3': (15.374,36.713,1.967)
O5': (14.401,34.547,0.264)
O4': (16.480,34.665,2.238)
C5': (14.135,34.492,1.663)
P: (13.215,34.681,-0.792)
C4': (15.177,35.277,2.425)
C2': (16.787,37.017,2.452)
O2': (16.828,37.365,3.821)
N1: (18.243,35.576,0.987)
O4: (20.434,35.372,-2.381)
O2: (19.922,36.857,1.864)
C6: (17.763,34.872,-0.094)
C5: (18.439,34.765,-1.245)
O3': (14.415,37.570,2.576)
N3: (20.134,36.092,-0.264)
OP1: (12.497,35.956,-0.536)
OP2: (13.780,34.416,-2.139)
C2: (19.466,36.221,0.930)
C1': (17.482,35.669,2.242)
C3': (15.374,36.713,1.967)
O5': (14.401,34.547,0.264)
O4': (16.480,34.665,2.238)
C5': (14.135,34.492,1.663)
P: (13.215,34.681,-0.792)
C4': (15.177,35.277,2.425)
C2': (16.787,37.017,2.452)
O2': (16.828,37.365,3.821)
N1: (18.243,35.576,0.987)
O4: (20.434,35.372,-2.381)
O2: (19.922,36.857,1.864)
C6: (17.763,34.872,-0.094)
C5: (18.439,34.765,-1.245)
O3': (14.415,37.570,2.576)
Image (generated by PyMOL):