Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A385:A386
Extra
PDB:
ATOM 1 O3' C A 384 -85.628 -47.121 60.548 1.00 0.01 O
ATOM 2 P G A 385 -84.907 -45.705 60.667 1.00 0.01 P
ATOM 3 OP1 G A 385 -83.474 -45.926 60.457 1.00 0.01 O
ATOM 4 OP2 G A 385 -85.346 -45.106 61.928 1.00 0.01 O
ATOM 5 O5' G A 385 -85.519 -44.928 59.427 1.00 0.01 O
ATOM 6 C5' G A 385 -84.690 -44.194 58.549 1.00 0.01 C
ATOM 7 C4' G A 385 -85.384 -43.903 57.252 1.00 0.01 C
ATOM 8 O4' G A 385 -85.191 -45.023 56.368 1.00 0.01 O
ATOM 9 C3' G A 385 -86.896 -43.701 57.350 1.00 0.01 C
ATOM 10 O3' G A 385 -87.337 -42.765 56.354 1.00 0.01 O
ATOM 11 C2' G A 385 -87.431 -45.071 56.995 1.00 0.01 C
ATOM 12 O2' G A 385 -88.742 -45.051 56.498 1.00 0.01 O
ATOM 13 C1' G A 385 -86.444 -45.485 55.920 1.00 0.01 C
ATOM 14 N9 G A 385 -86.352 -46.938 55.660 1.00 0.01 N
ATOM 15 C8 G A 385 -85.935 -47.914 56.509 1.00 0.01 C
ATOM 16 N7 G A 385 -85.927 -49.081 55.970 1.00 0.01 N
ATOM 17 C5 G A 385 -86.353 -48.871 54.668 1.00 0.01 C
ATOM 18 C6 G A 385 -86.542 -49.788 53.592 1.00 0.01 C
ATOM 19 O6 G A 385 -86.374 -51.031 53.576 1.00 0.01 O
ATOM 20 N1 G A 385 -86.967 -49.134 52.450 1.00 0.01 N
ATOM 21 C2 G A 385 -87.192 -47.801 52.347 1.00 0.01 C
ATOM 22 N2 G A 385 -87.608 -47.350 51.149 1.00 0.01 N
ATOM 23 N3 G A 385 -87.020 -46.975 53.349 1.00 0.01 N
ATOM 24 C4 G A 385 -86.608 -47.562 54.466 1.00 0.01 C
ATOM 25 P U A 386 -87.214 -41.177 56.585 1.00 1.03 P
ATOM 26 OP1 U A 386 -87.988 -40.517 55.514 1.00 1.03 O
ATOM 27 OP2 U A 386 -85.778 -40.857 56.717 1.00 1.03 O
ATOM 28 O5' U A 386 -87.948 -40.985 57.960 1.00 1.03 O
TER
ATOM 1 O3' G B 385 -87.337 -42.765 56.354 1.00 0.01 O
ATOM 2 P U B 386 -87.214 -41.177 56.585 1.00 1.03 P
ATOM 3 OP1 U B 386 -87.988 -40.517 55.514 1.00 1.03 O
ATOM 4 OP2 U B 386 -85.778 -40.857 56.717 1.00 1.03 O
ATOM 5 O5' U B 386 -87.948 -40.985 57.960 1.00 1.03 O
ATOM 6 C5' U B 386 -89.303 -41.334 58.073 1.00 1.03 C
ATOM 7 C4' U B 386 -90.082 -40.298 58.821 1.00 1.03 C
ATOM 8 O4' U B 386 -89.691 -40.327 60.205 1.00 1.03 O
ATOM 9 C3' U B 386 -89.883 -38.864 58.373 1.00 1.03 C
ATOM 10 O3' U B 386 -91.073 -38.147 58.633 1.00 1.03 O
ATOM 11 C2' U B 386 -88.818 -38.371 59.318 1.00 1.03 C
ATOM 12 O2' U B 386 -88.806 -36.983 59.464 1.00 1.03 O
ATOM 13 C1' U B 386 -89.250 -39.052 60.592 1.00 1.03 C
ATOM 14 N1 U B 386 -88.207 -39.251 61.574 1.00 1.04 N
ATOM 15 C2 U B 386 -88.446 -38.664 62.790 1.00 1.04 C
ATOM 16 O2 U B 386 -89.397 -37.926 63.001 1.00 1.04 O
ATOM 17 N3 U B 386 -87.511 -38.949 63.736 1.00 1.04 N
ATOM 18 C4 U B 386 -86.419 -39.761 63.584 1.00 1.04 C
ATOM 19 O4 U B 386 -85.688 -39.890 64.562 1.00 1.04 O
ATOM 20 C5 U B 386 -86.261 -40.380 62.307 1.00 1.04 C
ATOM 21 C6 U B 386 -87.169 -40.125 61.364 1.00 1.04 C
ATOM 22 P G B 387 -92.248 -38.146 57.556 1.00 5.00 P
ATOM 23 OP1 G B 387 -91.728 -38.820 56.354 1.00 5.00 O
ATOM 24 OP2 G B 387 -92.720 -36.752 57.467 1.00 5.00 O
ATOM 25 O5' G B 387 -93.374 -39.037 58.204 1.00 5.00 O
TER
ATOM 2 P G A 385 -84.907 -45.705 60.667 1.00 0.01 P
ATOM 3 OP1 G A 385 -83.474 -45.926 60.457 1.00 0.01 O
ATOM 4 OP2 G A 385 -85.346 -45.106 61.928 1.00 0.01 O
ATOM 5 O5' G A 385 -85.519 -44.928 59.427 1.00 0.01 O
ATOM 6 C5' G A 385 -84.690 -44.194 58.549 1.00 0.01 C
ATOM 7 C4' G A 385 -85.384 -43.903 57.252 1.00 0.01 C
ATOM 8 O4' G A 385 -85.191 -45.023 56.368 1.00 0.01 O
ATOM 9 C3' G A 385 -86.896 -43.701 57.350 1.00 0.01 C
ATOM 10 O3' G A 385 -87.337 -42.765 56.354 1.00 0.01 O
ATOM 11 C2' G A 385 -87.431 -45.071 56.995 1.00 0.01 C
ATOM 12 O2' G A 385 -88.742 -45.051 56.498 1.00 0.01 O
ATOM 13 C1' G A 385 -86.444 -45.485 55.920 1.00 0.01 C
ATOM 14 N9 G A 385 -86.352 -46.938 55.660 1.00 0.01 N
ATOM 15 C8 G A 385 -85.935 -47.914 56.509 1.00 0.01 C
ATOM 16 N7 G A 385 -85.927 -49.081 55.970 1.00 0.01 N
ATOM 17 C5 G A 385 -86.353 -48.871 54.668 1.00 0.01 C
ATOM 18 C6 G A 385 -86.542 -49.788 53.592 1.00 0.01 C
ATOM 19 O6 G A 385 -86.374 -51.031 53.576 1.00 0.01 O
ATOM 20 N1 G A 385 -86.967 -49.134 52.450 1.00 0.01 N
ATOM 21 C2 G A 385 -87.192 -47.801 52.347 1.00 0.01 C
ATOM 22 N2 G A 385 -87.608 -47.350 51.149 1.00 0.01 N
ATOM 23 N3 G A 385 -87.020 -46.975 53.349 1.00 0.01 N
ATOM 24 C4 G A 385 -86.608 -47.562 54.466 1.00 0.01 C
ATOM 25 P U A 386 -87.214 -41.177 56.585 1.00 1.03 P
ATOM 26 OP1 U A 386 -87.988 -40.517 55.514 1.00 1.03 O
ATOM 27 OP2 U A 386 -85.778 -40.857 56.717 1.00 1.03 O
ATOM 28 O5' U A 386 -87.948 -40.985 57.960 1.00 1.03 O
TER
ATOM 1 O3' G B 385 -87.337 -42.765 56.354 1.00 0.01 O
ATOM 2 P U B 386 -87.214 -41.177 56.585 1.00 1.03 P
ATOM 3 OP1 U B 386 -87.988 -40.517 55.514 1.00 1.03 O
ATOM 4 OP2 U B 386 -85.778 -40.857 56.717 1.00 1.03 O
ATOM 5 O5' U B 386 -87.948 -40.985 57.960 1.00 1.03 O
ATOM 6 C5' U B 386 -89.303 -41.334 58.073 1.00 1.03 C
ATOM 7 C4' U B 386 -90.082 -40.298 58.821 1.00 1.03 C
ATOM 8 O4' U B 386 -89.691 -40.327 60.205 1.00 1.03 O
ATOM 9 C3' U B 386 -89.883 -38.864 58.373 1.00 1.03 C
ATOM 10 O3' U B 386 -91.073 -38.147 58.633 1.00 1.03 O
ATOM 11 C2' U B 386 -88.818 -38.371 59.318 1.00 1.03 C
ATOM 12 O2' U B 386 -88.806 -36.983 59.464 1.00 1.03 O
ATOM 13 C1' U B 386 -89.250 -39.052 60.592 1.00 1.03 C
ATOM 14 N1 U B 386 -88.207 -39.251 61.574 1.00 1.04 N
ATOM 15 C2 U B 386 -88.446 -38.664 62.790 1.00 1.04 C
ATOM 16 O2 U B 386 -89.397 -37.926 63.001 1.00 1.04 O
ATOM 17 N3 U B 386 -87.511 -38.949 63.736 1.00 1.04 N
ATOM 18 C4 U B 386 -86.419 -39.761 63.584 1.00 1.04 C
ATOM 19 O4 U B 386 -85.688 -39.890 64.562 1.00 1.04 O
ATOM 20 C5 U B 386 -86.261 -40.380 62.307 1.00 1.04 C
ATOM 21 C6 U B 386 -87.169 -40.125 61.364 1.00 1.04 C
ATOM 22 P G B 387 -92.248 -38.146 57.556 1.00 5.00 P
ATOM 23 OP1 G B 387 -91.728 -38.820 56.354 1.00 5.00 O
ATOM 24 OP2 G B 387 -92.720 -36.752 57.467 1.00 5.00 O
ATOM 25 O5' G B 387 -93.374 -39.037 58.204 1.00 5.00 O
TER
Atoms:
OP1: (-83.474,-45.926,60.457)
OP2: (-85.346,-45.106,61.928)
C3': (-86.896,-43.701,57.350)
C1': (-86.444,-45.485,55.920)
C5': (-84.690,-44.194,58.549)
O6: (-86.374,-51.031,53.576)
O4': (-85.191,-45.023,56.368)
C8: (-85.935,-47.914,56.509)
C2: (-87.192,-47.801,52.347)
C6: (-86.542,-49.788,53.592)
C5: (-86.353,-48.871,54.668)
C4: (-86.608,-47.562,54.466)
P: (-84.907,-45.705,60.667)
C4': (-85.384,-43.903,57.252)
C2': (-87.431,-45.071,56.995)
O2': (-88.742,-45.051,56.498)
N1: (-86.967,-49.134,52.450)
N2: (-87.608,-47.350,51.149)
N3: (-87.020,-46.975,53.349)
N7: (-85.927,-49.081,55.970)
N9: (-86.352,-46.938,55.660)
O5': (-85.519,-44.928,59.427)
O3': (-87.337,-42.765,56.354)
OP2: (-85.346,-45.106,61.928)
C3': (-86.896,-43.701,57.350)
C1': (-86.444,-45.485,55.920)
C5': (-84.690,-44.194,58.549)
O6: (-86.374,-51.031,53.576)
O4': (-85.191,-45.023,56.368)
C8: (-85.935,-47.914,56.509)
C2: (-87.192,-47.801,52.347)
C6: (-86.542,-49.788,53.592)
C5: (-86.353,-48.871,54.668)
C4: (-86.608,-47.562,54.466)
P: (-84.907,-45.705,60.667)
C4': (-85.384,-43.903,57.252)
C2': (-87.431,-45.071,56.995)
O2': (-88.742,-45.051,56.498)
N1: (-86.967,-49.134,52.450)
N2: (-87.608,-47.350,51.149)
N3: (-87.020,-46.975,53.349)
N7: (-85.927,-49.081,55.970)
N9: (-86.352,-46.938,55.660)
O5': (-85.519,-44.928,59.427)
O3': (-87.337,-42.765,56.354)
C4: (-86.419,-39.761,63.584)
N3: (-87.511,-38.949,63.736)
OP1: (-87.988,-40.517,55.514)
OP2: (-85.778,-40.857,56.717)
C2: (-88.446,-38.664,62.790)
C1': (-89.250,-39.052,60.592)
C3': (-89.883,-38.864,58.373)
O5': (-87.948,-40.985,57.960)
O4': (-89.691,-40.327,60.205)
C5': (-89.303,-41.334,58.073)
P: (-87.214,-41.177,56.585)
C4': (-90.082,-40.298,58.821)
C2': (-88.818,-38.371,59.318)
O2': (-88.806,-36.983,59.464)
N1: (-88.207,-39.251,61.574)
O4: (-85.688,-39.890,64.562)
O2: (-89.397,-37.926,63.001)
C6: (-87.169,-40.125,61.364)
C5: (-86.261,-40.380,62.307)
O3': (-91.073,-38.147,58.633)
N3: (-87.511,-38.949,63.736)
OP1: (-87.988,-40.517,55.514)
OP2: (-85.778,-40.857,56.717)
C2: (-88.446,-38.664,62.790)
C1': (-89.250,-39.052,60.592)
C3': (-89.883,-38.864,58.373)
O5': (-87.948,-40.985,57.960)
O4': (-89.691,-40.327,60.205)
C5': (-89.303,-41.334,58.073)
P: (-87.214,-41.177,56.585)
C4': (-90.082,-40.298,58.821)
C2': (-88.818,-38.371,59.318)
O2': (-88.806,-36.983,59.464)
N1: (-88.207,-39.251,61.574)
O4: (-85.688,-39.890,64.562)
O2: (-89.397,-37.926,63.001)
C6: (-87.169,-40.125,61.364)
C5: (-86.261,-40.380,62.307)
O3': (-91.073,-38.147,58.633)
Image (generated by PyMOL):