ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5F:61:62

Extra

PDB:
ATOM 1 O3' U A 0 259.234 38.049 251.801 1.00108.21 O
ATOM 2 P A A 1 260.477 37.085 251.432 1.00 65.88 P
ATOM 3 OP1 A A 1 260.925 36.440 252.698 1.00 66.33 O
ATOM 4 OP2 A A 1 261.465 37.910 250.657 1.00 66.47 O
ATOM 5 O5' A A 1 259.796 35.972 250.496 1.00 65.21 O
ATOM 6 C5' A A 1 259.168 36.296 249.274 1.00 64.68 C
ATOM 7 C4' A A 1 259.015 35.072 248.409 1.00 64.38 C
ATOM 8 O4' A A 1 259.455 35.395 247.073 1.00 64.54 O
ATOM 9 C3' A A 1 259.876 33.900 248.823 1.00 64.88 C
ATOM 10 O3' A A 1 259.350 32.700 248.243 1.00 64.43 O
ATOM 11 C2' A A 1 261.194 34.252 248.153 1.00 65.66 C
ATOM 12 O2' A A 1 262.081 33.179 247.999 1.00 66.14 O
ATOM 13 C1' A A 1 260.704 34.774 246.814 1.00 65.25 C
ATOM 14 N9 A A 1 261.580 35.773 246.224 1.00 65.84 N
ATOM 15 C8 A A 1 262.067 36.888 246.827 1.00 66.31 C
ATOM 16 N7 A A 1 262.808 37.591 246.017 1.00 66.80 N
ATOM 17 C5 A A 1 262.794 36.878 244.828 1.00 66.64 C
ATOM 18 C6 A A 1 263.384 37.087 243.576 1.00 67.01 C
ATOM 19 N6 A A 1 264.153 38.141 243.331 1.00 67.63 N
ATOM 20 N1 A A 1 263.153 36.204 242.574 1.00 66.74 N
ATOM 21 C2 A A 1 262.383 35.161 242.853 1.00 66.15 C
ATOM 22 N3 A A 1 261.783 34.853 243.995 1.00 65.77 N
ATOM 23 C4 A A 1 262.023 35.762 244.941 1.00 66.04 C
ATOM 24 P U A 2 258.325 31.780 249.067 1.00 73.59 P
ATOM 25 OP1 U A 2 257.667 30.892 248.084 1.00 73.06 O
ATOM 26 OP2 U A 2 257.489 32.682 249.883 1.00 73.24 O
ATOM 27 O5' U A 2 259.276 30.936 250.023 1.00 74.26 O
TER

ATOM 1 O3' A B 1 259.350 32.700 248.243 1.00 64.43 O
ATOM 2 P U B 2 258.325 31.780 249.067 1.00 73.59 P
ATOM 3 OP1 U B 2 257.667 30.892 248.084 1.00 73.06 O
ATOM 4 OP2 U B 2 257.489 32.682 249.883 1.00 73.24 O
ATOM 5 O5' U B 2 259.276 30.936 250.023 1.00 74.26 O
ATOM 6 C5' U B 2 259.924 29.767 249.553 1.00 74.55 C
ATOM 7 C4' U B 2 259.831 28.616 250.536 1.00 74.62 C
ATOM 8 O4' U B 2 260.347 29.025 251.825 1.00 75.15 O
ATOM 9 C3' U B 2 258.430 28.075 250.800 1.00 73.82 C
ATOM 10 O3' U B 2 258.497 26.673 250.959 1.00 73.89 O
ATOM 11 C2' U B 2 258.089 28.683 252.136 1.00 73.85 C
ATOM 12 O2' U B 2 257.138 27.964 252.884 1.00 73.44 O
ATOM 13 C1' U B 2 259.430 28.647 252.810 1.00 74.77 C
ATOM 14 N1 U B 2 259.523 29.553 253.929 1.00 75.06 N
ATOM 15 C2 U B 2 259.710 28.893 255.128 1.00 75.42 C
ATOM 16 O2 U B 2 259.864 27.690 255.222 1.00 75.53 O
ATOM 17 N3 U B 2 259.758 29.693 256.221 1.00 75.72 N
ATOM 18 C4 U B 2 259.604 31.062 256.183 1.00 75.65 C
ATOM 19 O4 U B 2 259.698 31.641 257.270 1.00 76.01 O
ATOM 20 C5 U B 2 259.357 31.671 254.886 1.00 75.22 C
ATOM 21 C6 U B 2 259.318 30.902 253.800 1.00 74.94 C
ATOM 22 P C B 3 258.696 25.740 249.684 1.00 63.56 P
ATOM 23 OP1 C B 3 260.101 25.226 249.742 1.00 64.42 O
ATOM 24 OP2 C B 3 258.258 26.537 248.496 1.00 63.14 O
ATOM 25 O5' C B 3 257.693 24.529 249.933 1.00 63.05 O
TER

Atoms:
OP1: (260.925,36.440,252.698)
OP2: (261.465,37.910,250.657)
C3': (259.876,33.900,248.823)
C1': (260.704,34.774,246.814)
C5': (259.168,36.296,249.274)
O4': (259.455,35.395,247.073)
C8: (262.067,36.888,246.827)
O2': (262.081,33.179,247.999)
C6: (263.384,37.087,243.576)
C5: (262.794,36.878,244.828)
C4: (262.023,35.762,244.941)
P: (260.477,37.085,251.432)
C4': (259.015,35.072,248.409)
C2': (261.194,34.252,248.153)
C2: (262.383,35.161,242.853)
N1: (263.153,36.204,242.574)
N3: (261.783,34.853,243.995)
N6: (264.153,38.141,243.331)
N7: (262.808,37.591,246.017)
N9: (261.580,35.773,246.224)
O5': (259.796,35.972,250.496)
O3': (259.350,32.700,248.243)
C4: (259.604,31.062,256.183)
N3: (259.758,29.693,256.221)
OP1: (257.667,30.892,248.084)
OP2: (257.489,32.682,249.883)
C2: (259.710,28.893,255.128)
C1': (259.430,28.647,252.810)
C3': (258.430,28.075,250.800)
O5': (259.276,30.936,250.023)
O4': (260.347,29.025,251.825)
C5': (259.924,29.767,249.553)
P: (258.325,31.780,249.067)
C4': (259.831,28.616,250.536)
C2': (258.089,28.683,252.136)
O2': (257.138,27.964,252.884)
N1: (259.523,29.553,253.929)
O4: (259.698,31.641,257.270)
O2: (259.864,27.690,255.222)
C6: (259.318,30.902,253.800)
C5: (259.357,31.671,254.886)
O3': (258.497,26.673,250.959)
Image (generated by PyMOL):
PyMOL image
show in jmol