ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:W6:W7

Extra

PDB:
ATOM 1 O3' G A 5 -114.112 0.394 53.659 1.00145.30 O
ATOM 2 P A A 6 -115.457 1.040 54.269 1.00112.50 P
ATOM 3 OP1 A A 6 -115.403 2.498 53.975 1.00112.72 O
ATOM 4 OP2 A A 6 -115.601 0.584 55.678 1.00109.35 O
ATOM 5 O5' A A 6 -116.635 0.382 53.411 1.00177.34 O
ATOM 6 C5' A A 6 -116.541 0.300 51.970 1.00165.67 C
ATOM 7 C4' A A 6 -117.621 -0.599 51.399 1.00171.74 C
ATOM 8 O4' A A 6 -117.523 -1.923 51.993 1.00171.02 O
ATOM 9 C3' A A 6 -119.072 -0.149 51.567 1.00165.35 C
ATOM 10 O3' A A 6 -119.798 -0.460 50.372 1.00165.35 O
ATOM 11 C2' A A 6 -119.578 -1.026 52.710 1.00171.38 C
ATOM 12 O2' A A 6 -120.966 -1.292 52.648 1.00173.80 O
ATOM 13 C1' A A 6 -118.787 -2.311 52.487 1.00171.67 C
ATOM 14 N9 A A 6 -118.603 -3.106 53.701 1.00117.26 N
ATOM 15 C8 A A 6 -117.617 -3.016 54.655 1.00117.26 C
ATOM 16 N7 A A 6 -117.733 -3.899 55.620 1.00117.26 N
ATOM 17 C5 A A 6 -118.875 -4.616 55.282 1.00117.26 C
ATOM 18 C6 A A 6 -119.539 -5.698 55.901 1.00117.26 C
ATOM 19 N6 A A 6 -119.132 -6.275 57.034 1.00117.26 N
ATOM 20 N1 A A 6 -120.652 -6.172 55.304 1.00117.26 N
ATOM 21 C2 A A 6 -121.064 -5.599 54.164 1.00117.26 C
ATOM 22 N3 A A 6 -120.530 -4.584 53.487 1.00117.26 N
ATOM 23 C4 A A 6 -119.423 -4.133 54.106 1.00117.26 C
ATOM 24 P U A 7 -120.719 0.660 49.665 1.00115.00 P
ATOM 25 OP1 U A 7 -122.132 0.200 49.767 1.00109.68 O
ATOM 26 OP2 U A 7 -120.139 0.945 48.327 1.00109.57 O
ATOM 27 O5' U A 7 -120.538 1.962 50.569 1.00134.81 O
TER

ATOM 1 O3' A B 6 -119.798 -0.460 50.372 1.00165.35 O
ATOM 2 P U B 7 -120.719 0.660 49.665 1.00115.00 P
ATOM 3 OP1 U B 7 -122.132 0.200 49.767 1.00109.68 O
ATOM 4 OP2 U B 7 -120.139 0.945 48.327 1.00109.57 O
ATOM 5 O5' U B 7 -120.538 1.962 50.569 1.00134.81 O
ATOM 6 C5' U B 7 -121.592 2.410 51.444 1.00127.89 C
ATOM 7 C4' U B 7 -121.615 3.919 51.509 1.00129.16 C
ATOM 8 O4' U B 7 -120.481 4.406 52.268 1.00125.80 O
ATOM 9 C3' U B 7 -121.519 4.639 50.172 1.00127.41 C
ATOM 10 O3' U B 7 -122.799 4.738 49.556 1.00130.85 O
ATOM 11 C2' U B 7 -120.963 6.010 50.552 1.00127.78 C
ATOM 12 O2' U B 7 -121.970 6.935 50.900 1.00122.27 O
ATOM 13 C1' U B 7 -120.122 5.689 51.792 1.00126.95 C
ATOM 14 N1 U B 7 -118.662 5.755 51.619 1.00 77.18 N
ATOM 15 C2 U B 7 -117.973 6.670 52.400 1.00 81.78 C
ATOM 16 O2 U B 7 -118.528 7.402 53.206 1.00 77.67 O
ATOM 17 N3 U B 7 -116.610 6.698 52.203 1.00 70.71 N
ATOM 18 C4 U B 7 -115.879 5.928 51.319 1.00 76.23 C
ATOM 19 O4 U B 7 -114.658 6.091 51.239 1.00 76.81 O
ATOM 20 C5 U B 7 -116.659 5.005 50.547 1.00 72.33 C
ATOM 21 C6 U B 7 -117.992 4.949 50.718 1.00 76.81 C
ATOM 22 P A B 8 -122.914 4.820 47.955 1.00 79.00 P
ATOM 23 OP1 A B 8 -124.093 3.989 47.586 1.00 80.46 O
ATOM 24 OP2 A B 8 -121.585 4.527 47.341 1.00 71.22 O
ATOM 25 O5' A B 8 -123.245 6.355 47.670 1.00106.64 O
TER

Atoms:
OP1: (-115.403,2.498,53.975)
OP2: (-115.601,0.584,55.678)
C3': (-119.072,-0.149,51.567)
C1': (-118.787,-2.311,52.487)
C5': (-116.541,0.300,51.970)
O4': (-117.523,-1.923,51.993)
C8: (-117.617,-3.016,54.655)
O2': (-120.966,-1.292,52.648)
C6: (-119.539,-5.698,55.901)
C5: (-118.875,-4.616,55.282)
C4: (-119.423,-4.133,54.106)
P: (-115.457,1.040,54.269)
C4': (-117.621,-0.599,51.399)
C2': (-119.578,-1.026,52.710)
C2: (-121.064,-5.599,54.164)
N1: (-120.652,-6.172,55.304)
N3: (-120.530,-4.584,53.487)
N6: (-119.132,-6.275,57.034)
N7: (-117.733,-3.899,55.620)
N9: (-118.603,-3.106,53.701)
O5': (-116.635,0.382,53.411)
O3': (-119.798,-0.460,50.372)
C4: (-115.879,5.928,51.319)
N3: (-116.610,6.698,52.203)
OP1: (-122.132,0.200,49.767)
OP2: (-120.139,0.945,48.327)
C2: (-117.973,6.670,52.400)
C1': (-120.122,5.689,51.792)
C3': (-121.519,4.639,50.172)
O5': (-120.538,1.962,50.569)
O4': (-120.481,4.406,52.268)
C5': (-121.592,2.410,51.444)
P: (-120.719,0.660,49.665)
C4': (-121.615,3.919,51.509)
C2': (-120.963,6.010,50.552)
O2': (-121.970,6.935,50.900)
N1: (-118.662,5.755,51.619)
O4: (-114.658,6.091,51.239)
O2: (-118.528,7.402,53.206)
C6: (-117.992,4.949,50.718)
C5: (-116.659,5.005,50.547)
O3': (-122.799,4.738,49.556)
Image (generated by PyMOL):
PyMOL image
show in jmol