ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OEU:A28:A29

Extra

PDB:
ATOM 1 O3' A A 27 -16.269 14.042 5.377 1.00 62.11 O
ATOM 2 P A A 28 -16.737 12.656 6.038 1.00 63.48 P
ATOM 3 OP1 A A 28 -15.946 12.439 7.255 1.00 63.62 O
ATOM 4 OP2 A A 28 -16.775 11.600 4.995 1.00 66.66 O
ATOM 5 O5' A A 28 -18.243 12.999 6.433 1.00 63.47 O
ATOM 6 C5' A A 28 -19.175 11.936 6.651 1.00 63.06 C
ATOM 7 C4' A A 28 -20.560 12.298 6.141 1.00 62.47 C
ATOM 8 O4' A A 28 -21.057 13.497 6.804 1.00 61.29 O
ATOM 9 C3' A A 28 -20.670 12.541 4.633 1.00 62.38 C
ATOM 10 O3' A A 28 -21.719 11.720 4.084 1.00 64.14 O
ATOM 11 C2' A A 28 -21.024 14.030 4.567 1.00 61.82 C
ATOM 12 O2' A A 28 -21.806 14.377 3.443 1.00 60.62 O
ATOM 13 C1' A A 28 -21.840 14.184 5.854 1.00 60.66 C
ATOM 14 N9 A A 28 -22.112 15.553 6.298 1.00 60.30 N
ATOM 15 C8 A A 28 -21.215 16.499 6.726 1.00 60.17 C
ATOM 16 N7 A A 28 -21.769 17.644 7.061 1.00 59.98 N
ATOM 17 C5 A A 28 -23.125 17.439 6.839 1.00 59.99 C
ATOM 18 C6 A A 28 -24.267 18.257 6.999 1.00 60.21 C
ATOM 19 N6 A A 28 -24.222 19.515 7.444 1.00 60.40 N
ATOM 20 N1 A A 28 -25.478 17.733 6.692 1.00 60.60 N
ATOM 21 C2 A A 28 -25.549 16.473 6.249 1.00 60.06 C
ATOM 22 N3 A A 28 -24.551 15.610 6.061 1.00 60.02 N
ATOM 23 C4 A A 28 -23.354 16.154 6.371 1.00 60.25 C
ATOM 24 P U A 29 -21.431 10.372 3.257 1.00 66.14 P
ATOM 25 OP1 U A 29 -22.717 9.832 2.757 1.00 64.50 O
ATOM 26 OP2 U A 29 -20.533 9.512 4.063 1.00 66.20 O
ATOM 27 O5' U A 29 -20.596 10.919 2.016 1.00 65.15 O
TER

ATOM 1 O3' A B 28 -21.719 11.720 4.084 1.00 64.14 O
ATOM 2 P U B 29 -21.431 10.372 3.257 1.00 66.14 P
ATOM 3 OP1 U B 29 -22.717 9.832 2.757 1.00 64.50 O
ATOM 4 OP2 U B 29 -20.533 9.512 4.063 1.00 66.20 O
ATOM 5 O5' U B 29 -20.596 10.919 2.016 1.00 65.15 O
ATOM 6 C5' U B 29 -21.202 11.818 1.108 1.00 64.80 C
ATOM 7 C4' U B 29 -20.397 11.794 -0.160 1.00 64.99 C
ATOM 8 O4' U B 29 -19.009 11.894 0.214 1.00 63.95 O
ATOM 9 C3' U B 29 -20.476 10.467 -0.897 1.00 64.42 C
ATOM 10 O3' U B 29 -21.641 10.420 -1.750 1.00 63.61 O
ATOM 11 C2' U B 29 -19.150 10.422 -1.652 1.00 64.66 C
ATOM 12 O2' U B 29 -19.187 11.160 -2.850 1.00 65.38 O
ATOM 13 C1' U B 29 -18.226 11.201 -0.736 1.00 65.74 C
ATOM 14 N1 U B 29 -17.151 10.430 -0.058 1.00 66.06 N
ATOM 15 C2 U B 29 -15.895 10.489 -0.630 1.00 66.15 C
ATOM 16 O2 U B 29 -15.666 11.113 -1.656 1.00 66.63 O
ATOM 17 N3 U B 29 -14.925 9.782 0.041 1.00 65.00 N
ATOM 18 C4 U B 29 -15.102 9.052 1.207 1.00 65.95 C
ATOM 19 O4 U B 29 -14.142 8.473 1.697 1.00 66.83 O
ATOM 20 C5 U B 29 -16.438 9.046 1.752 1.00 66.27 C
ATOM 21 C6 U B 29 -17.398 9.728 1.112 1.00 66.49 C
ATOM 22 P A B 30 -22.164 8.970 -2.225 1.00 62.98 P
ATOM 23 OP1 A B 30 -23.620 9.008 -2.486 1.00 63.38 O
ATOM 24 OP2 A B 30 -21.623 7.963 -1.288 1.00 63.40 O
ATOM 25 O5' A B 30 -21.360 8.802 -3.598 1.00 59.41 O
TER

Atoms:
OP1: (-15.946,12.439,7.255)
OP2: (-16.775,11.600,4.995)
C3': (-20.670,12.541,4.633)
C1': (-21.840,14.184,5.854)
C5': (-19.175,11.936,6.651)
O4': (-21.057,13.497,6.804)
C8: (-21.215,16.499,6.726)
O2': (-21.806,14.377,3.443)
C6: (-24.267,18.257,6.999)
C5: (-23.125,17.439,6.839)
C4: (-23.354,16.154,6.371)
P: (-16.737,12.656,6.038)
C4': (-20.560,12.298,6.141)
C2': (-21.024,14.030,4.567)
C2: (-25.549,16.473,6.249)
N1: (-25.478,17.733,6.692)
N3: (-24.551,15.610,6.061)
N6: (-24.222,19.515,7.444)
N7: (-21.769,17.644,7.061)
N9: (-22.112,15.553,6.298)
O5': (-18.243,12.999,6.433)
O3': (-21.719,11.720,4.084)
C4: (-15.102,9.052,1.207)
N3: (-14.925,9.782,0.041)
OP1: (-22.717,9.832,2.757)
OP2: (-20.533,9.512,4.063)
C2: (-15.895,10.489,-0.630)
C1': (-18.226,11.201,-0.736)
C3': (-20.476,10.467,-0.897)
O5': (-20.596,10.919,2.016)
O4': (-19.009,11.894,0.214)
C5': (-21.202,11.818,1.108)
P: (-21.431,10.372,3.257)
C4': (-20.397,11.794,-0.160)
C2': (-19.150,10.422,-1.652)
O2': (-19.187,11.160,-2.850)
N1: (-17.151,10.430,-0.058)
O4: (-14.142,8.473,1.697)
O2: (-15.666,11.113,-1.656)
C6: (-17.398,9.728,1.112)
C5: (-16.438,9.046,1.752)
O3': (-21.641,10.420,-1.750)
Image (generated by PyMOL):
PyMOL image
show in jmol