Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:4110:4111
Extra
PDB:
ATOM 1 O3' C A 109 38.298 10.963 126.613 1.00 59.11 O
ATOM 2 P A A 110 37.785 10.137 125.338 1.00 60.15 P
ATOM 3 OP1 A A 110 36.454 10.665 124.985 1.00 60.19 O
ATOM 4 OP2 A A 110 37.904 8.707 125.660 1.00 60.01 O
ATOM 5 O5' A A 110 38.853 10.530 124.228 1.00 59.57 O
ATOM 6 C5' A A 110 38.538 11.463 123.225 1.00 59.28 C
ATOM 7 C4' A A 110 39.428 12.678 123.254 1.00 59.51 C
ATOM 8 O4' A A 110 39.117 13.431 122.073 1.00 59.10 O
ATOM 9 C3' A A 110 39.144 13.639 124.396 1.00 60.35 C
ATOM 10 O3' A A 110 40.160 14.654 124.449 1.00 60.58 O
ATOM 11 C2' A A 110 37.888 14.296 123.887 1.00 60.34 C
ATOM 12 O2' A A 110 37.605 15.532 124.488 1.00 61.00 O
ATOM 13 C1' A A 110 38.228 14.475 122.411 1.00 59.59 C
ATOM 14 N9 A A 110 37.053 14.414 121.532 1.00 59.22 N
ATOM 15 C8 A A 110 35.797 13.936 121.839 1.00 59.37 C
ATOM 16 N7 A A 110 34.911 14.068 120.872 1.00 59.00 N
ATOM 17 C5 A A 110 35.634 14.708 119.887 1.00 58.59 C
ATOM 18 C6 A A 110 35.291 15.116 118.601 1.00 58.10 C
ATOM 19 N6 A A 110 34.088 14.953 118.078 1.00 57.94 N
ATOM 20 N1 A A 110 36.241 15.696 117.847 1.00 57.79 N
ATOM 21 C2 A A 110 37.454 15.831 118.372 1.00 57.97 C
ATOM 22 N3 A A 110 37.895 15.470 119.562 1.00 58.43 N
ATOM 23 C4 A A 110 36.932 14.923 120.277 1.00 58.72 C
ATOM 24 P U A 111 41.364 14.636 125.528 1.00 50.85 P
ATOM 25 OP1 U A 111 42.421 15.511 124.968 1.00 50.74 O
ATOM 26 OP2 U A 111 41.677 13.209 125.796 1.00 50.62 O
ATOM 27 O5' U A 111 40.737 15.314 126.810 1.00 51.76 O
TER
ATOM 1 O3' A B 110 40.160 14.654 124.449 1.00 60.58 O
ATOM 2 P U B 111 41.364 14.636 125.528 1.00 50.85 P
ATOM 3 OP1 U B 111 42.421 15.511 124.968 1.00 50.74 O
ATOM 4 OP2 U B 111 41.677 13.209 125.796 1.00 50.62 O
ATOM 5 O5' U B 111 40.737 15.314 126.810 1.00 51.76 O
ATOM 6 C5' U B 111 39.991 16.499 126.677 1.00 52.05 C
ATOM 7 C4' U B 111 39.717 17.166 127.998 1.00 53.01 C
ATOM 8 O4' U B 111 38.809 16.365 128.795 1.00 53.30 O
ATOM 9 C3' U B 111 40.924 17.433 128.887 1.00 53.53 C
ATOM 10 O3' U B 111 40.773 18.730 129.447 1.00 54.26 O
ATOM 11 C2' U B 111 40.766 16.380 129.987 1.00 53.88 C
ATOM 12 O2' U B 111 41.385 16.700 131.197 1.00 54.66 O
ATOM 13 C1' U B 111 39.270 16.377 130.128 1.00 54.05 C
ATOM 14 N1 U B 111 38.703 15.223 130.829 1.00 54.18 N
ATOM 15 C2 U B 111 37.406 15.425 131.241 1.00 54.58 C
ATOM 16 O2 U B 111 36.853 16.485 131.046 1.00 54.82 O
ATOM 17 N3 U B 111 36.777 14.374 131.853 1.00 54.72 N
ATOM 18 C4 U B 111 37.347 13.131 132.080 1.00 54.48 C
ATOM 19 O4 U B 111 36.690 12.245 132.646 1.00 54.65 O
ATOM 20 C5 U B 111 38.705 12.990 131.615 1.00 54.05 C
ATOM 21 C6 U B 111 39.320 14.014 131.015 1.00 53.92 C
ATOM 22 P U B 112 41.872 19.838 129.158 1.00 57.36 P
ATOM 23 OP1 U B 112 41.202 21.177 129.199 1.00 57.85 O
ATOM 24 OP2 U B 112 42.563 19.415 127.908 1.00 56.48 O
ATOM 25 O5' U B 112 42.806 19.672 130.422 1.00 58.03 O
TER
ATOM 2 P A A 110 37.785 10.137 125.338 1.00 60.15 P
ATOM 3 OP1 A A 110 36.454 10.665 124.985 1.00 60.19 O
ATOM 4 OP2 A A 110 37.904 8.707 125.660 1.00 60.01 O
ATOM 5 O5' A A 110 38.853 10.530 124.228 1.00 59.57 O
ATOM 6 C5' A A 110 38.538 11.463 123.225 1.00 59.28 C
ATOM 7 C4' A A 110 39.428 12.678 123.254 1.00 59.51 C
ATOM 8 O4' A A 110 39.117 13.431 122.073 1.00 59.10 O
ATOM 9 C3' A A 110 39.144 13.639 124.396 1.00 60.35 C
ATOM 10 O3' A A 110 40.160 14.654 124.449 1.00 60.58 O
ATOM 11 C2' A A 110 37.888 14.296 123.887 1.00 60.34 C
ATOM 12 O2' A A 110 37.605 15.532 124.488 1.00 61.00 O
ATOM 13 C1' A A 110 38.228 14.475 122.411 1.00 59.59 C
ATOM 14 N9 A A 110 37.053 14.414 121.532 1.00 59.22 N
ATOM 15 C8 A A 110 35.797 13.936 121.839 1.00 59.37 C
ATOM 16 N7 A A 110 34.911 14.068 120.872 1.00 59.00 N
ATOM 17 C5 A A 110 35.634 14.708 119.887 1.00 58.59 C
ATOM 18 C6 A A 110 35.291 15.116 118.601 1.00 58.10 C
ATOM 19 N6 A A 110 34.088 14.953 118.078 1.00 57.94 N
ATOM 20 N1 A A 110 36.241 15.696 117.847 1.00 57.79 N
ATOM 21 C2 A A 110 37.454 15.831 118.372 1.00 57.97 C
ATOM 22 N3 A A 110 37.895 15.470 119.562 1.00 58.43 N
ATOM 23 C4 A A 110 36.932 14.923 120.277 1.00 58.72 C
ATOM 24 P U A 111 41.364 14.636 125.528 1.00 50.85 P
ATOM 25 OP1 U A 111 42.421 15.511 124.968 1.00 50.74 O
ATOM 26 OP2 U A 111 41.677 13.209 125.796 1.00 50.62 O
ATOM 27 O5' U A 111 40.737 15.314 126.810 1.00 51.76 O
TER
ATOM 1 O3' A B 110 40.160 14.654 124.449 1.00 60.58 O
ATOM 2 P U B 111 41.364 14.636 125.528 1.00 50.85 P
ATOM 3 OP1 U B 111 42.421 15.511 124.968 1.00 50.74 O
ATOM 4 OP2 U B 111 41.677 13.209 125.796 1.00 50.62 O
ATOM 5 O5' U B 111 40.737 15.314 126.810 1.00 51.76 O
ATOM 6 C5' U B 111 39.991 16.499 126.677 1.00 52.05 C
ATOM 7 C4' U B 111 39.717 17.166 127.998 1.00 53.01 C
ATOM 8 O4' U B 111 38.809 16.365 128.795 1.00 53.30 O
ATOM 9 C3' U B 111 40.924 17.433 128.887 1.00 53.53 C
ATOM 10 O3' U B 111 40.773 18.730 129.447 1.00 54.26 O
ATOM 11 C2' U B 111 40.766 16.380 129.987 1.00 53.88 C
ATOM 12 O2' U B 111 41.385 16.700 131.197 1.00 54.66 O
ATOM 13 C1' U B 111 39.270 16.377 130.128 1.00 54.05 C
ATOM 14 N1 U B 111 38.703 15.223 130.829 1.00 54.18 N
ATOM 15 C2 U B 111 37.406 15.425 131.241 1.00 54.58 C
ATOM 16 O2 U B 111 36.853 16.485 131.046 1.00 54.82 O
ATOM 17 N3 U B 111 36.777 14.374 131.853 1.00 54.72 N
ATOM 18 C4 U B 111 37.347 13.131 132.080 1.00 54.48 C
ATOM 19 O4 U B 111 36.690 12.245 132.646 1.00 54.65 O
ATOM 20 C5 U B 111 38.705 12.990 131.615 1.00 54.05 C
ATOM 21 C6 U B 111 39.320 14.014 131.015 1.00 53.92 C
ATOM 22 P U B 112 41.872 19.838 129.158 1.00 57.36 P
ATOM 23 OP1 U B 112 41.202 21.177 129.199 1.00 57.85 O
ATOM 24 OP2 U B 112 42.563 19.415 127.908 1.00 56.48 O
ATOM 25 O5' U B 112 42.806 19.672 130.422 1.00 58.03 O
TER
Atoms:
OP1: (36.454,10.665,124.985)
OP2: (37.904,8.707,125.660)
C3': (39.144,13.639,124.396)
C1': (38.228,14.475,122.411)
C5': (38.538,11.463,123.225)
O4': (39.117,13.431,122.073)
C8: (35.797,13.936,121.839)
O2': (37.605,15.532,124.488)
C6: (35.291,15.116,118.601)
C5: (35.634,14.708,119.887)
C4: (36.932,14.923,120.277)
P: (37.785,10.137,125.338)
C4': (39.428,12.678,123.254)
C2': (37.888,14.296,123.887)
C2: (37.454,15.831,118.372)
N1: (36.241,15.696,117.847)
N3: (37.895,15.470,119.562)
N6: (34.088,14.953,118.078)
N7: (34.911,14.068,120.872)
N9: (37.053,14.414,121.532)
O5': (38.853,10.530,124.228)
O3': (40.160,14.654,124.449)
OP2: (37.904,8.707,125.660)
C3': (39.144,13.639,124.396)
C1': (38.228,14.475,122.411)
C5': (38.538,11.463,123.225)
O4': (39.117,13.431,122.073)
C8: (35.797,13.936,121.839)
O2': (37.605,15.532,124.488)
C6: (35.291,15.116,118.601)
C5: (35.634,14.708,119.887)
C4: (36.932,14.923,120.277)
P: (37.785,10.137,125.338)
C4': (39.428,12.678,123.254)
C2': (37.888,14.296,123.887)
C2: (37.454,15.831,118.372)
N1: (36.241,15.696,117.847)
N3: (37.895,15.470,119.562)
N6: (34.088,14.953,118.078)
N7: (34.911,14.068,120.872)
N9: (37.053,14.414,121.532)
O5': (38.853,10.530,124.228)
O3': (40.160,14.654,124.449)
C4: (37.347,13.131,132.080)
N3: (36.777,14.374,131.853)
OP1: (42.421,15.511,124.968)
OP2: (41.677,13.209,125.796)
C2: (37.406,15.425,131.241)
C1': (39.270,16.377,130.128)
C3': (40.924,17.433,128.887)
O5': (40.737,15.314,126.810)
O4': (38.809,16.365,128.795)
C5': (39.991,16.499,126.677)
P: (41.364,14.636,125.528)
C4': (39.717,17.166,127.998)
C2': (40.766,16.380,129.987)
O2': (41.385,16.700,131.197)
N1: (38.703,15.223,130.829)
O4: (36.690,12.245,132.646)
O2: (36.853,16.485,131.046)
C6: (39.320,14.014,131.015)
C5: (38.705,12.990,131.615)
O3': (40.773,18.730,129.447)
N3: (36.777,14.374,131.853)
OP1: (42.421,15.511,124.968)
OP2: (41.677,13.209,125.796)
C2: (37.406,15.425,131.241)
C1': (39.270,16.377,130.128)
C3': (40.924,17.433,128.887)
O5': (40.737,15.314,126.810)
O4': (38.809,16.365,128.795)
C5': (39.991,16.499,126.677)
P: (41.364,14.636,125.528)
C4': (39.717,17.166,127.998)
C2': (40.766,16.380,129.987)
O2': (41.385,16.700,131.197)
N1: (38.703,15.223,130.829)
O4: (36.690,12.245,132.646)
O2: (36.853,16.485,131.046)
C6: (39.320,14.014,131.015)
C5: (38.705,12.990,131.615)
O3': (40.773,18.730,129.447)
Image (generated by PyMOL):