ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A780:A758

Extra

PDB:
ATOM 1 O3' U A 779 -20.970 132.581 104.884 1.00 46.50 O
ATOM 2 P A A 780 -19.489 132.369 104.298 1.00 35.69 P
ATOM 3 OP1 A A 780 -18.536 132.626 105.410 1.00 45.06 O
ATOM 4 OP2 A A 780 -19.383 133.157 103.037 1.00 41.78 O
ATOM 5 O5' A A 780 -19.409 130.821 103.912 1.00 11.10 O
ATOM 6 C5' A A 780 -18.941 129.844 104.869 1.00 11.22 C
ATOM 7 C4' A A 780 -18.941 128.433 104.286 1.00 12.24 C
ATOM 8 O4' A A 780 -20.282 128.037 103.892 1.00 13.06 O
ATOM 9 C3' A A 780 -18.061 128.119 103.078 1.00 12.06 C
ATOM 10 O3' A A 780 -16.735 127.761 103.453 1.00 12.88 O
ATOM 11 C2' A A 780 -18.715 126.865 102.528 1.00 11.67 C
ATOM 12 O2' A A 780 -18.266 125.725 103.237 1.00 12.24 O
ATOM 13 C1' A A 780 -20.194 127.106 102.833 1.00 11.33 C
ATOM 14 N9 A A 780 -20.909 127.637 101.680 1.00 30.04 N
ATOM 15 C8 A A 780 -20.980 128.928 101.242 1.00 29.96 C
ATOM 16 N7 A A 780 -21.749 129.085 100.197 1.00 30.51 N
ATOM 17 C5 A A 780 -22.207 127.806 99.923 1.00 28.59 C
ATOM 18 C6 A A 780 -23.088 127.297 98.946 1.00 27.72 C
ATOM 19 N6 A A 780 -23.700 128.049 98.034 1.00 27.61 N
ATOM 20 N1 A A 780 -23.328 125.972 98.945 1.00 27.83 N
ATOM 21 C2 A A 780 -22.726 125.220 99.865 1.00 27.83 C
ATOM 22 N3 A A 780 -21.894 125.581 100.841 1.00 28.54 N
ATOM 23 C4 A A 780 -21.678 126.903 100.815 1.00 30.09 C
ATOM 24 P G A 781 -15.546 127.840 102.372 1.00 12.15 P
ATOM 25 OP1 G A 781 -14.479 126.877 102.736 1.00 19.20 O
ATOM 26 OP2 G A 781 -15.202 129.278 102.190 1.00 20.15 O
ATOM 27 O5' G A 781 -16.193 127.303 101.025 1.00 2.95 O
TER

ATOM 1 O3' C B 757 -27.489 132.454 90.692 1.00 3.28 O
ATOM 2 P A B 758 -28.691 131.973 91.650 1.00 20.29 P
ATOM 3 OP1 A B 758 -29.635 131.159 90.849 1.00 42.45 O
ATOM 4 OP2 A B 758 -29.206 133.134 92.429 1.00 44.15 O
ATOM 5 O5' A B 758 -27.954 130.998 92.664 1.00 0.88 O
ATOM 6 C5' A B 758 -27.361 129.775 92.202 1.00 0.88 C
ATOM 7 C4' A B 758 -26.782 129.012 93.361 1.00 0.88 C
ATOM 8 O4' A B 758 -25.616 129.702 93.857 1.00 0.88 O
ATOM 9 C3' A B 758 -27.705 128.887 94.562 1.00 0.88 C
ATOM 10 O3' A B 758 -28.565 127.781 94.423 1.00 0.88 O
ATOM 11 C2' A B 758 -26.737 128.703 95.710 1.00 0.88 C
ATOM 12 O2' A B 758 -26.344 127.351 95.843 1.00 0.88 O
ATOM 13 C1' A B 758 -25.568 129.588 95.262 1.00 0.88 C
ATOM 14 N9 A B 758 -25.672 130.933 95.813 1.00 24.95 N
ATOM 15 C8 A B 758 -26.624 131.875 95.538 1.00 25.64 C
ATOM 16 N7 A B 758 -26.501 132.970 96.248 1.00 27.79 N
ATOM 17 C5 A B 758 -25.384 132.732 97.034 1.00 26.97 C
ATOM 18 C6 A B 758 -24.752 133.488 98.023 1.00 27.17 C
ATOM 19 N6 A B 758 -25.166 134.684 98.415 1.00 27.21 N
ATOM 20 N1 A B 758 -23.666 132.965 98.613 1.00 29.31 N
ATOM 21 C2 A B 758 -23.254 131.758 98.229 1.00 28.19 C
ATOM 22 N3 A B 758 -23.766 130.947 97.320 1.00 27.86 N
ATOM 23 C4 A B 758 -24.848 131.496 96.755 1.00 26.50 C
ATOM 24 P A B 759 -29.638 127.471 95.561 1.00 0.92 P
ATOM 25 OP1 A B 759 -30.743 126.664 94.963 1.00 0.92 O
ATOM 26 OP2 A B 759 -29.964 128.723 96.304 1.00 0.92 O
ATOM 27 O5' A B 759 -28.818 126.549 96.542 1.00 0.79 O
TER

Atoms:
OP1: (-18.536,132.626,105.410)
OP2: (-19.383,133.157,103.037)
C3': (-18.061,128.119,103.078)
C1': (-20.194,127.106,102.833)
C5': (-18.941,129.844,104.869)
O4': (-20.282,128.037,103.892)
C8: (-20.980,128.928,101.242)
O2': (-18.266,125.725,103.237)
C6: (-23.088,127.297,98.946)
C5: (-22.207,127.806,99.923)
C4: (-21.678,126.903,100.815)
P: (-19.489,132.369,104.298)
C4': (-18.941,128.433,104.286)
C2': (-18.715,126.865,102.528)
C2: (-22.726,125.220,99.865)
N1: (-23.328,125.972,98.945)
N3: (-21.894,125.581,100.841)
N6: (-23.700,128.049,98.034)
N7: (-21.749,129.085,100.197)
N9: (-20.909,127.637,101.680)
O5': (-19.409,130.821,103.912)
O3': (-16.735,127.761,103.453)
OP1: (-29.635,131.159,90.849)
OP2: (-29.206,133.134,92.429)
C3': (-27.705,128.887,94.562)
C1': (-25.568,129.588,95.262)
C5': (-27.361,129.775,92.202)
O4': (-25.616,129.702,93.857)
C8: (-26.624,131.875,95.538)
O2': (-26.344,127.351,95.843)
C6: (-24.752,133.488,98.023)
C5: (-25.384,132.732,97.034)
C4: (-24.848,131.496,96.755)
P: (-28.691,131.973,91.650)
C4': (-26.782,129.012,93.361)
C2': (-26.737,128.703,95.710)
C2: (-23.254,131.758,98.229)
N1: (-23.666,132.965,98.613)
N3: (-23.766,130.947,97.320)
N6: (-25.166,134.684,98.415)
N7: (-26.501,132.970,96.248)
N9: (-25.672,130.933,95.813)
O5': (-27.954,130.998,92.664)
O3': (-28.565,127.781,94.423)
Image (generated by PyMOL):
PyMOL image
show in jmol