Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A118:A117
Extra
PDB:
ATOM 1 O3' A A 117 -35.942 -46.812 55.506 1.00 0.01 O
ATOM 2 P A A 118 -35.184 -45.431 55.716 1.00 0.01 P
ATOM 3 OP1 A A 118 -35.815 -44.756 56.863 1.00 0.01 O
ATOM 4 OP2 A A 118 -35.153 -44.743 54.405 1.00 0.01 O
ATOM 5 O5' A A 118 -33.726 -45.893 56.115 1.00 0.01 O
ATOM 6 C5' A A 118 -32.713 -46.036 55.129 1.00 0.01 C
ATOM 7 C4' A A 118 -31.411 -46.440 55.750 1.00 0.01 C
ATOM 8 O4' A A 118 -31.600 -47.654 56.513 1.00 0.01 O
ATOM 9 C3' A A 118 -30.281 -46.733 54.779 1.00 0.01 C
ATOM 10 O3' A A 118 -29.058 -46.255 55.323 1.00 0.01 O
ATOM 11 C2' A A 118 -30.243 -48.240 54.751 1.00 0.01 C
ATOM 12 O2' A A 118 -28.995 -48.763 54.392 1.00 0.01 O
ATOM 13 C1' A A 118 -30.571 -48.545 56.185 1.00 0.01 C
ATOM 14 N9 A A 118 -31.010 -49.909 56.445 1.00 0.01 N
ATOM 15 C8 A A 118 -32.142 -50.532 56.068 1.00 0.01 C
ATOM 16 N7 A A 118 -32.209 -51.755 56.522 1.00 0.01 N
ATOM 17 C5 A A 118 -31.053 -51.948 57.255 1.00 0.01 C
ATOM 18 C6 A A 118 -30.531 -53.024 57.989 1.00 0.01 C
ATOM 19 N6 A A 118 -31.122 -54.189 58.093 1.00 0.01 N
ATOM 20 N1 A A 118 -29.368 -52.910 58.612 1.00 0.01 N
ATOM 21 C2 A A 118 -28.759 -51.746 58.493 1.00 0.01 C
ATOM 22 N3 A A 118 -29.144 -50.659 57.836 1.00 0.01 N
ATOM 23 C4 A A 118 -30.315 -50.813 57.215 1.00 0.01 C
ATOM 24 P U A 119 -28.683 -44.704 55.191 1.00 0.01 P
ATOM 25 OP1 U A 119 -29.443 -44.186 54.047 1.00 0.01 O
ATOM 26 OP2 U A 119 -27.234 -44.608 55.172 1.00 0.01 O
ATOM 27 O5' U A 119 -29.249 -44.078 56.545 1.00 0.01 O
TER
ATOM 1 O3' G B 116 -34.041 -50.406 51.884 1.00 0.01 O
ATOM 2 P A B 117 -33.975 -48.932 52.434 1.00 0.01 P
ATOM 3 OP1 A B 117 -34.995 -48.159 51.707 1.00 0.01 O
ATOM 4 OP2 A B 117 -32.570 -48.538 52.334 1.00 0.01 O
ATOM 5 O5' A B 117 -34.396 -49.071 53.948 1.00 0.01 O
ATOM 6 C5' A B 117 -35.591 -49.729 54.299 1.00 0.01 C
ATOM 7 C4' A B 117 -36.118 -49.224 55.604 1.00 0.01 C
ATOM 8 O4' A B 117 -35.883 -50.191 56.650 1.00 0.01 O
ATOM 9 C3' A B 117 -35.459 -47.972 56.130 1.00 0.01 C
ATOM 10 O3' A B 117 -35.942 -46.812 55.506 1.00 0.01 O
ATOM 11 C2' A B 117 -35.761 -48.024 57.619 1.00 0.01 C
ATOM 12 O2' A B 117 -37.026 -47.475 57.890 1.00 0.01 O
ATOM 13 C1' A B 117 -35.835 -49.521 57.890 1.00 0.01 C
ATOM 14 N9 A B 117 -34.696 -49.998 58.675 1.00 0.10 N
ATOM 15 C8 A B 117 -33.427 -49.507 58.802 1.00 0.10 C
ATOM 16 N7 A B 117 -32.701 -50.191 59.655 1.00 0.10 N
ATOM 17 C5 A B 117 -33.559 -51.157 60.126 1.00 0.10 C
ATOM 18 C6 A B 117 -33.418 -52.191 61.038 1.00 0.10 C
ATOM 19 N6 A B 117 -32.302 -52.468 61.686 1.00 0.10 N
ATOM 20 N1 A B 117 -34.460 -52.975 61.275 1.00 0.10 N
ATOM 21 C2 A B 117 -35.578 -52.726 60.615 1.00 0.10 C
ATOM 22 N3 A B 117 -35.852 -51.784 59.728 1.00 0.10 N
ATOM 23 C4 A B 117 -34.783 -51.030 59.537 1.00 0.10 C
ATOM 24 P A B 118 -35.184 -45.431 55.716 1.00 0.01 P
ATOM 25 OP1 A B 118 -35.815 -44.756 56.863 1.00 0.01 O
ATOM 26 OP2 A B 118 -35.153 -44.743 54.405 1.00 0.01 O
ATOM 27 O5' A B 118 -33.726 -45.893 56.115 1.00 0.01 O
TER
ATOM 2 P A A 118 -35.184 -45.431 55.716 1.00 0.01 P
ATOM 3 OP1 A A 118 -35.815 -44.756 56.863 1.00 0.01 O
ATOM 4 OP2 A A 118 -35.153 -44.743 54.405 1.00 0.01 O
ATOM 5 O5' A A 118 -33.726 -45.893 56.115 1.00 0.01 O
ATOM 6 C5' A A 118 -32.713 -46.036 55.129 1.00 0.01 C
ATOM 7 C4' A A 118 -31.411 -46.440 55.750 1.00 0.01 C
ATOM 8 O4' A A 118 -31.600 -47.654 56.513 1.00 0.01 O
ATOM 9 C3' A A 118 -30.281 -46.733 54.779 1.00 0.01 C
ATOM 10 O3' A A 118 -29.058 -46.255 55.323 1.00 0.01 O
ATOM 11 C2' A A 118 -30.243 -48.240 54.751 1.00 0.01 C
ATOM 12 O2' A A 118 -28.995 -48.763 54.392 1.00 0.01 O
ATOM 13 C1' A A 118 -30.571 -48.545 56.185 1.00 0.01 C
ATOM 14 N9 A A 118 -31.010 -49.909 56.445 1.00 0.01 N
ATOM 15 C8 A A 118 -32.142 -50.532 56.068 1.00 0.01 C
ATOM 16 N7 A A 118 -32.209 -51.755 56.522 1.00 0.01 N
ATOM 17 C5 A A 118 -31.053 -51.948 57.255 1.00 0.01 C
ATOM 18 C6 A A 118 -30.531 -53.024 57.989 1.00 0.01 C
ATOM 19 N6 A A 118 -31.122 -54.189 58.093 1.00 0.01 N
ATOM 20 N1 A A 118 -29.368 -52.910 58.612 1.00 0.01 N
ATOM 21 C2 A A 118 -28.759 -51.746 58.493 1.00 0.01 C
ATOM 22 N3 A A 118 -29.144 -50.659 57.836 1.00 0.01 N
ATOM 23 C4 A A 118 -30.315 -50.813 57.215 1.00 0.01 C
ATOM 24 P U A 119 -28.683 -44.704 55.191 1.00 0.01 P
ATOM 25 OP1 U A 119 -29.443 -44.186 54.047 1.00 0.01 O
ATOM 26 OP2 U A 119 -27.234 -44.608 55.172 1.00 0.01 O
ATOM 27 O5' U A 119 -29.249 -44.078 56.545 1.00 0.01 O
TER
ATOM 1 O3' G B 116 -34.041 -50.406 51.884 1.00 0.01 O
ATOM 2 P A B 117 -33.975 -48.932 52.434 1.00 0.01 P
ATOM 3 OP1 A B 117 -34.995 -48.159 51.707 1.00 0.01 O
ATOM 4 OP2 A B 117 -32.570 -48.538 52.334 1.00 0.01 O
ATOM 5 O5' A B 117 -34.396 -49.071 53.948 1.00 0.01 O
ATOM 6 C5' A B 117 -35.591 -49.729 54.299 1.00 0.01 C
ATOM 7 C4' A B 117 -36.118 -49.224 55.604 1.00 0.01 C
ATOM 8 O4' A B 117 -35.883 -50.191 56.650 1.00 0.01 O
ATOM 9 C3' A B 117 -35.459 -47.972 56.130 1.00 0.01 C
ATOM 10 O3' A B 117 -35.942 -46.812 55.506 1.00 0.01 O
ATOM 11 C2' A B 117 -35.761 -48.024 57.619 1.00 0.01 C
ATOM 12 O2' A B 117 -37.026 -47.475 57.890 1.00 0.01 O
ATOM 13 C1' A B 117 -35.835 -49.521 57.890 1.00 0.01 C
ATOM 14 N9 A B 117 -34.696 -49.998 58.675 1.00 0.10 N
ATOM 15 C8 A B 117 -33.427 -49.507 58.802 1.00 0.10 C
ATOM 16 N7 A B 117 -32.701 -50.191 59.655 1.00 0.10 N
ATOM 17 C5 A B 117 -33.559 -51.157 60.126 1.00 0.10 C
ATOM 18 C6 A B 117 -33.418 -52.191 61.038 1.00 0.10 C
ATOM 19 N6 A B 117 -32.302 -52.468 61.686 1.00 0.10 N
ATOM 20 N1 A B 117 -34.460 -52.975 61.275 1.00 0.10 N
ATOM 21 C2 A B 117 -35.578 -52.726 60.615 1.00 0.10 C
ATOM 22 N3 A B 117 -35.852 -51.784 59.728 1.00 0.10 N
ATOM 23 C4 A B 117 -34.783 -51.030 59.537 1.00 0.10 C
ATOM 24 P A B 118 -35.184 -45.431 55.716 1.00 0.01 P
ATOM 25 OP1 A B 118 -35.815 -44.756 56.863 1.00 0.01 O
ATOM 26 OP2 A B 118 -35.153 -44.743 54.405 1.00 0.01 O
ATOM 27 O5' A B 118 -33.726 -45.893 56.115 1.00 0.01 O
TER
Atoms:
OP1: (-35.815,-44.756,56.863)
OP2: (-35.153,-44.743,54.405)
C3': (-30.281,-46.733,54.779)
C1': (-30.571,-48.545,56.185)
C5': (-32.713,-46.036,55.129)
O4': (-31.600,-47.654,56.513)
C8: (-32.142,-50.532,56.068)
O2': (-28.995,-48.763,54.392)
C6: (-30.531,-53.024,57.989)
C5: (-31.053,-51.948,57.255)
C4: (-30.315,-50.813,57.215)
P: (-35.184,-45.431,55.716)
C4': (-31.411,-46.440,55.750)
C2': (-30.243,-48.240,54.751)
C2: (-28.759,-51.746,58.493)
N1: (-29.368,-52.910,58.612)
N3: (-29.144,-50.659,57.836)
N6: (-31.122,-54.189,58.093)
N7: (-32.209,-51.755,56.522)
N9: (-31.010,-49.909,56.445)
O5': (-33.726,-45.893,56.115)
O3': (-29.058,-46.255,55.323)
OP2: (-35.153,-44.743,54.405)
C3': (-30.281,-46.733,54.779)
C1': (-30.571,-48.545,56.185)
C5': (-32.713,-46.036,55.129)
O4': (-31.600,-47.654,56.513)
C8: (-32.142,-50.532,56.068)
O2': (-28.995,-48.763,54.392)
C6: (-30.531,-53.024,57.989)
C5: (-31.053,-51.948,57.255)
C4: (-30.315,-50.813,57.215)
P: (-35.184,-45.431,55.716)
C4': (-31.411,-46.440,55.750)
C2': (-30.243,-48.240,54.751)
C2: (-28.759,-51.746,58.493)
N1: (-29.368,-52.910,58.612)
N3: (-29.144,-50.659,57.836)
N6: (-31.122,-54.189,58.093)
N7: (-32.209,-51.755,56.522)
N9: (-31.010,-49.909,56.445)
O5': (-33.726,-45.893,56.115)
O3': (-29.058,-46.255,55.323)
OP1: (-34.995,-48.159,51.707)
OP2: (-32.570,-48.538,52.334)
C3': (-35.459,-47.972,56.130)
C1': (-35.835,-49.521,57.890)
C5': (-35.591,-49.729,54.299)
O4': (-35.883,-50.191,56.650)
C8: (-33.427,-49.507,58.802)
O2': (-37.026,-47.475,57.890)
C6: (-33.418,-52.191,61.038)
C5: (-33.559,-51.157,60.126)
C4: (-34.783,-51.030,59.537)
P: (-33.975,-48.932,52.434)
C4': (-36.118,-49.224,55.604)
C2': (-35.761,-48.024,57.619)
C2: (-35.578,-52.726,60.615)
N1: (-34.460,-52.975,61.275)
N3: (-35.852,-51.784,59.728)
N6: (-32.302,-52.468,61.686)
N7: (-32.701,-50.191,59.655)
N9: (-34.696,-49.998,58.675)
O5': (-34.396,-49.071,53.948)
O3': (-35.942,-46.812,55.506)
OP2: (-32.570,-48.538,52.334)
C3': (-35.459,-47.972,56.130)
C1': (-35.835,-49.521,57.890)
C5': (-35.591,-49.729,54.299)
O4': (-35.883,-50.191,56.650)
C8: (-33.427,-49.507,58.802)
O2': (-37.026,-47.475,57.890)
C6: (-33.418,-52.191,61.038)
C5: (-33.559,-51.157,60.126)
C4: (-34.783,-51.030,59.537)
P: (-33.975,-48.932,52.434)
C4': (-36.118,-49.224,55.604)
C2': (-35.761,-48.024,57.619)
C2: (-35.578,-52.726,60.615)
N1: (-34.460,-52.975,61.275)
N3: (-35.852,-51.784,59.728)
N6: (-32.302,-52.468,61.686)
N7: (-32.701,-50.191,59.655)
N9: (-34.696,-49.998,58.675)
O5': (-34.396,-49.071,53.948)
O3': (-35.942,-46.812,55.506)
Image (generated by PyMOL):