ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OXM:B33:B70

Extra

PDB:
ATOM 1 O3' A A 32 -9.624 -30.520 23.369 1.00 52.69 O
ATOM 2 P A A 33 -9.599 -28.952 23.671 1.00 54.20 P
ATOM 3 OP1 A A 33 -9.027 -28.224 22.514 1.00 54.57 O
ATOM 4 OP2 A A 33 -9.035 -28.766 25.026 1.00 54.21 O
ATOM 5 O5' A A 33 -11.159 -28.640 23.749 1.00 55.66 O
ATOM 6 C5' A A 33 -12.050 -29.144 22.763 1.00 57.61 C
ATOM 7 C4' A A 33 -13.389 -28.453 22.897 1.00 59.76 C
ATOM 8 O4' A A 33 -13.869 -28.598 24.257 1.00 60.45 O
ATOM 9 C3' A A 33 -13.347 -26.947 22.701 1.00 61.11 C
ATOM 10 O3' A A 33 -13.379 -26.609 21.326 1.00 62.16 O
ATOM 11 C2' A A 33 -14.609 -26.528 23.440 1.00 61.75 C
ATOM 12 O2' A A 33 -15.789 -26.877 22.742 1.00 62.71 O
ATOM 13 C1' A A 33 -14.470 -27.387 24.691 1.00 61.34 C
ATOM 14 N9 A A 33 -13.653 -26.788 25.752 1.00 61.61 N
ATOM 15 C8 A A 33 -12.435 -27.223 26.200 1.00 61.04 C
ATOM 16 N7 A A 33 -11.927 -26.493 27.164 1.00 61.27 N
ATOM 17 C5 A A 33 -12.878 -25.509 27.370 1.00 61.90 C
ATOM 18 C6 A A 33 -12.941 -24.417 28.262 1.00 62.17 C
ATOM 19 N6 A A 33 -11.981 -24.138 29.145 1.00 62.01 N
ATOM 20 N1 A A 33 -14.030 -23.620 28.215 1.00 62.86 N
ATOM 21 C2 A A 33 -14.998 -23.899 27.331 1.00 63.13 C
ATOM 22 N3 A A 33 -15.049 -24.894 26.441 1.00 62.85 N
ATOM 23 C4 A A 33 -13.951 -25.673 26.510 1.00 62.21 C
ATOM 24 P G A 34 -12.167 -25.771 20.701 1.00 63.19 P
ATOM 25 OP1 G A 34 -12.440 -25.595 19.257 1.00 63.56 O
ATOM 26 OP2 G A 34 -10.891 -26.388 21.132 1.00 62.24 O
ATOM 27 O5' G A 34 -12.296 -24.356 21.441 1.00 64.52 O
TER

ATOM 1 O3' C B 69 -5.534 -21.273 35.016 1.00 61.03 O
ATOM 2 P A B 70 -6.161 -22.634 35.587 1.00 61.19 P
ATOM 3 OP1 A B 70 -6.575 -22.402 36.989 1.00 61.76 O
ATOM 4 OP2 A B 70 -5.235 -23.756 35.295 1.00 60.58 O
ATOM 5 O5' A B 70 -7.476 -22.800 34.686 1.00 60.81 O
ATOM 6 C5' A B 70 -8.566 -21.889 34.809 1.00 60.27 C
ATOM 7 C4' A B 70 -9.517 -22.019 33.636 1.00 59.52 C
ATOM 8 O4' A B 70 -8.804 -21.858 32.381 1.00 59.29 O
ATOM 9 C3' A B 70 -10.191 -23.374 33.514 1.00 58.70 C
ATOM 10 O3' A B 70 -11.343 -23.431 34.331 1.00 58.71 O
ATOM 11 C2' A B 70 -10.554 -23.381 32.035 1.00 58.94 C
ATOM 12 O2' A B 70 -11.687 -22.583 31.736 1.00 59.38 O
ATOM 13 C1' A B 70 -9.287 -22.787 31.423 1.00 58.82 C
ATOM 14 N9 A B 70 -8.257 -23.796 31.126 1.00 57.94 N
ATOM 15 C8 A B 70 -7.027 -23.913 31.717 1.00 57.55 C
ATOM 16 N7 A B 70 -6.302 -24.909 31.267 1.00 56.82 N
ATOM 17 C5 A B 70 -7.109 -25.495 30.307 1.00 56.43 C
ATOM 18 C6 A B 70 -6.918 -26.607 29.458 1.00 55.71 C
ATOM 19 N6 A B 70 -5.802 -27.344 29.451 1.00 54.99 N
ATOM 20 N1 A B 70 -7.923 -26.939 28.613 1.00 55.74 N
ATOM 21 C2 A B 70 -9.041 -26.199 28.620 1.00 56.17 C
ATOM 22 N3 A B 70 -9.334 -25.136 29.373 1.00 56.77 N
ATOM 23 C4 A B 70 -8.319 -24.826 30.205 1.00 57.05 C
ATOM 24 P G B 71 -11.584 -24.670 35.316 1.00 58.45 P
ATOM 25 OP1 G B 71 -12.879 -24.447 35.998 1.00 58.91 O
ATOM 26 OP2 G B 71 -10.353 -24.883 36.114 1.00 58.18 O
ATOM 27 O5' G B 71 -11.731 -25.919 34.327 1.00 57.42 O
TER

Atoms:
OP1: (-9.027,-28.224,22.514)
OP2: (-9.035,-28.766,25.026)
C3': (-13.347,-26.947,22.701)
C1': (-14.470,-27.387,24.691)
C5': (-12.050,-29.144,22.763)
O4': (-13.869,-28.598,24.257)
C8: (-12.435,-27.223,26.200)
O2': (-15.789,-26.877,22.742)
C6: (-12.941,-24.417,28.262)
C5: (-12.878,-25.509,27.370)
C4: (-13.951,-25.673,26.510)
P: (-9.599,-28.952,23.671)
C4': (-13.389,-28.453,22.897)
C2': (-14.609,-26.528,23.440)
C2: (-14.998,-23.899,27.331)
N1: (-14.030,-23.620,28.215)
N3: (-15.049,-24.894,26.441)
N6: (-11.981,-24.138,29.145)
N7: (-11.927,-26.493,27.164)
N9: (-13.653,-26.788,25.752)
O5': (-11.159,-28.640,23.749)
O3': (-13.379,-26.609,21.326)
OP1: (-6.575,-22.402,36.989)
OP2: (-5.235,-23.756,35.295)
C3': (-10.191,-23.374,33.514)
C1': (-9.287,-22.787,31.423)
C5': (-8.566,-21.889,34.809)
O4': (-8.804,-21.858,32.381)
C8: (-7.027,-23.913,31.717)
O2': (-11.687,-22.583,31.736)
C6: (-6.918,-26.607,29.458)
C5: (-7.109,-25.495,30.307)
C4: (-8.319,-24.826,30.205)
P: (-6.161,-22.634,35.587)
C4': (-9.517,-22.019,33.636)
C2': (-10.554,-23.381,32.035)
C2: (-9.041,-26.199,28.620)
N1: (-7.923,-26.939,28.613)
N3: (-9.334,-25.136,29.373)
N6: (-5.802,-27.344,29.451)
N7: (-6.302,-24.909,31.267)
N9: (-8.257,-23.796,31.126)
O5': (-7.476,-22.800,34.686)
O3': (-11.343,-23.431,34.331)
Image (generated by PyMOL):
PyMOL image
show in jmol