Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1259:A1272
Extra
PDB:
ATOM 1 O3' G A1258 -170.366 40.036 1.620 1.00 69.58 O
ATOM 2 P A A1259 -171.527 39.361 2.497 1.00 56.88 P
ATOM 3 OP1 A A1259 -170.880 38.415 3.427 1.00 56.88 O
ATOM 4 OP2 A A1259 -172.539 38.841 1.538 1.00 56.88 O
ATOM 5 O5' A A1259 -172.124 40.591 3.318 1.00 56.88 O
ATOM 6 C5' A A1259 -171.350 41.252 4.306 1.00 56.88 C
ATOM 7 C4' A A1259 -171.886 42.629 4.576 1.00 56.88 C
ATOM 8 O4' A A1259 -172.313 43.227 3.328 1.00 56.88 O
ATOM 9 C3' A A1259 -173.120 42.696 5.457 1.00 56.88 C
ATOM 10 O3' A A1259 -172.816 42.637 6.836 1.00 56.88 O
ATOM 11 C2' A A1259 -173.767 44.005 5.023 1.00 56.88 C
ATOM 12 O2' A A1259 -173.098 45.124 5.596 1.00 56.88 O
ATOM 13 C1' A A1259 -173.488 43.979 3.524 1.00 56.88 C
ATOM 14 N9 A A1259 -174.574 43.326 2.768 1.00 57.13 N
ATOM 15 C8 A A1259 -174.460 42.243 1.920 1.00 57.13 C
ATOM 16 N7 A A1259 -175.592 41.863 1.366 1.00 57.13 N
ATOM 17 C5 A A1259 -176.510 42.763 1.890 1.00 57.13 C
ATOM 18 C6 A A1259 -177.893 42.902 1.693 1.00 57.13 C
ATOM 19 N6 A A1259 -178.593 42.097 0.892 1.00 57.13 N
ATOM 20 N1 A A1259 -178.527 43.901 2.347 1.00 57.13 N
ATOM 21 C2 A A1259 -177.804 44.699 3.146 1.00 57.13 C
ATOM 22 N3 A A1259 -176.498 44.678 3.416 1.00 57.13 N
ATOM 23 C4 A A1259 -175.902 43.673 2.748 1.00 57.13 C
ATOM 24 P C A1260 -173.164 41.315 7.683 1.00 81.96 P
ATOM 25 OP1 C A1260 -172.220 41.271 8.830 1.00 81.96 O
ATOM 26 OP2 C A1260 -173.190 40.174 6.724 1.00 81.96 O
ATOM 27 O5' C A1260 -174.639 41.611 8.208 1.00 81.96 O
TER
ATOM 1 O3' C B1271 -184.063 36.760 -2.801 1.00 64.11 O
ATOM 2 P A B1272 -183.670 37.543 -4.132 1.00 78.99 P
ATOM 3 OP1 A B1272 -184.934 37.952 -4.784 1.00 78.99 O
ATOM 4 OP2 A B1272 -182.727 36.675 -4.881 1.00 78.99 O
ATOM 5 O5' A B1272 -182.908 38.822 -3.571 1.00 78.99 O
ATOM 6 C5' A B1272 -183.533 39.687 -2.635 1.00 78.99 C
ATOM 7 C4' A B1272 -182.520 40.529 -1.900 1.00 78.99 C
ATOM 8 O4' A B1272 -181.653 39.673 -1.103 1.00 78.99 O
ATOM 9 C3' A B1272 -181.543 41.308 -2.768 1.00 78.99 C
ATOM 10 O3' A B1272 -182.071 42.502 -3.294 1.00 78.99 O
ATOM 11 C2' A B1272 -180.377 41.532 -1.822 1.00 78.99 C
ATOM 12 O2' A B1272 -180.683 42.540 -0.867 1.00 78.99 O
ATOM 13 C1' A B1272 -180.330 40.186 -1.114 1.00 78.99 C
ATOM 14 N9 A B1272 -179.463 39.236 -1.833 1.00 78.50 N
ATOM 15 C8 A B1272 -179.841 38.285 -2.753 1.00 78.50 C
ATOM 16 N7 A B1272 -178.840 37.596 -3.243 1.00 78.50 N
ATOM 17 C5 A B1272 -177.726 38.139 -2.614 1.00 78.50 C
ATOM 18 C6 A B1272 -176.358 37.836 -2.708 1.00 78.50 C
ATOM 19 N6 A B1272 -175.871 36.878 -3.502 1.00 78.50 N
ATOM 20 N1 A B1272 -175.513 38.565 -1.941 1.00 78.50 N
ATOM 21 C2 A B1272 -176.009 39.529 -1.143 1.00 78.50 C
ATOM 22 N3 A B1272 -177.273 39.908 -0.968 1.00 78.50 N
ATOM 23 C4 A B1272 -178.091 39.160 -1.742 1.00 78.50 C
ATOM 24 P A B1273 -181.122 43.449 -4.173 1.00 65.78 P
ATOM 25 OP1 A B1273 -181.994 44.136 -5.165 1.00 65.78 O
ATOM 26 OP2 A B1273 -180.002 42.600 -4.665 1.00 65.78 O
ATOM 27 O5' A B1273 -180.567 44.498 -3.107 1.00 65.78 O
TER
ATOM 2 P A A1259 -171.527 39.361 2.497 1.00 56.88 P
ATOM 3 OP1 A A1259 -170.880 38.415 3.427 1.00 56.88 O
ATOM 4 OP2 A A1259 -172.539 38.841 1.538 1.00 56.88 O
ATOM 5 O5' A A1259 -172.124 40.591 3.318 1.00 56.88 O
ATOM 6 C5' A A1259 -171.350 41.252 4.306 1.00 56.88 C
ATOM 7 C4' A A1259 -171.886 42.629 4.576 1.00 56.88 C
ATOM 8 O4' A A1259 -172.313 43.227 3.328 1.00 56.88 O
ATOM 9 C3' A A1259 -173.120 42.696 5.457 1.00 56.88 C
ATOM 10 O3' A A1259 -172.816 42.637 6.836 1.00 56.88 O
ATOM 11 C2' A A1259 -173.767 44.005 5.023 1.00 56.88 C
ATOM 12 O2' A A1259 -173.098 45.124 5.596 1.00 56.88 O
ATOM 13 C1' A A1259 -173.488 43.979 3.524 1.00 56.88 C
ATOM 14 N9 A A1259 -174.574 43.326 2.768 1.00 57.13 N
ATOM 15 C8 A A1259 -174.460 42.243 1.920 1.00 57.13 C
ATOM 16 N7 A A1259 -175.592 41.863 1.366 1.00 57.13 N
ATOM 17 C5 A A1259 -176.510 42.763 1.890 1.00 57.13 C
ATOM 18 C6 A A1259 -177.893 42.902 1.693 1.00 57.13 C
ATOM 19 N6 A A1259 -178.593 42.097 0.892 1.00 57.13 N
ATOM 20 N1 A A1259 -178.527 43.901 2.347 1.00 57.13 N
ATOM 21 C2 A A1259 -177.804 44.699 3.146 1.00 57.13 C
ATOM 22 N3 A A1259 -176.498 44.678 3.416 1.00 57.13 N
ATOM 23 C4 A A1259 -175.902 43.673 2.748 1.00 57.13 C
ATOM 24 P C A1260 -173.164 41.315 7.683 1.00 81.96 P
ATOM 25 OP1 C A1260 -172.220 41.271 8.830 1.00 81.96 O
ATOM 26 OP2 C A1260 -173.190 40.174 6.724 1.00 81.96 O
ATOM 27 O5' C A1260 -174.639 41.611 8.208 1.00 81.96 O
TER
ATOM 1 O3' C B1271 -184.063 36.760 -2.801 1.00 64.11 O
ATOM 2 P A B1272 -183.670 37.543 -4.132 1.00 78.99 P
ATOM 3 OP1 A B1272 -184.934 37.952 -4.784 1.00 78.99 O
ATOM 4 OP2 A B1272 -182.727 36.675 -4.881 1.00 78.99 O
ATOM 5 O5' A B1272 -182.908 38.822 -3.571 1.00 78.99 O
ATOM 6 C5' A B1272 -183.533 39.687 -2.635 1.00 78.99 C
ATOM 7 C4' A B1272 -182.520 40.529 -1.900 1.00 78.99 C
ATOM 8 O4' A B1272 -181.653 39.673 -1.103 1.00 78.99 O
ATOM 9 C3' A B1272 -181.543 41.308 -2.768 1.00 78.99 C
ATOM 10 O3' A B1272 -182.071 42.502 -3.294 1.00 78.99 O
ATOM 11 C2' A B1272 -180.377 41.532 -1.822 1.00 78.99 C
ATOM 12 O2' A B1272 -180.683 42.540 -0.867 1.00 78.99 O
ATOM 13 C1' A B1272 -180.330 40.186 -1.114 1.00 78.99 C
ATOM 14 N9 A B1272 -179.463 39.236 -1.833 1.00 78.50 N
ATOM 15 C8 A B1272 -179.841 38.285 -2.753 1.00 78.50 C
ATOM 16 N7 A B1272 -178.840 37.596 -3.243 1.00 78.50 N
ATOM 17 C5 A B1272 -177.726 38.139 -2.614 1.00 78.50 C
ATOM 18 C6 A B1272 -176.358 37.836 -2.708 1.00 78.50 C
ATOM 19 N6 A B1272 -175.871 36.878 -3.502 1.00 78.50 N
ATOM 20 N1 A B1272 -175.513 38.565 -1.941 1.00 78.50 N
ATOM 21 C2 A B1272 -176.009 39.529 -1.143 1.00 78.50 C
ATOM 22 N3 A B1272 -177.273 39.908 -0.968 1.00 78.50 N
ATOM 23 C4 A B1272 -178.091 39.160 -1.742 1.00 78.50 C
ATOM 24 P A B1273 -181.122 43.449 -4.173 1.00 65.78 P
ATOM 25 OP1 A B1273 -181.994 44.136 -5.165 1.00 65.78 O
ATOM 26 OP2 A B1273 -180.002 42.600 -4.665 1.00 65.78 O
ATOM 27 O5' A B1273 -180.567 44.498 -3.107 1.00 65.78 O
TER
Atoms:
OP1: (-170.880,38.415,3.427)
OP2: (-172.539,38.841,1.538)
C3': (-173.120,42.696,5.457)
C1': (-173.488,43.979,3.524)
C5': (-171.350,41.252,4.306)
O4': (-172.313,43.227,3.328)
C8: (-174.460,42.243,1.920)
O2': (-173.098,45.124,5.596)
C6: (-177.893,42.902,1.693)
C5: (-176.510,42.763,1.890)
C4: (-175.902,43.673,2.748)
P: (-171.527,39.361,2.497)
C4': (-171.886,42.629,4.576)
C2': (-173.767,44.005,5.023)
C2: (-177.804,44.699,3.146)
N1: (-178.527,43.901,2.347)
N3: (-176.498,44.678,3.416)
N6: (-178.593,42.097,0.892)
N7: (-175.592,41.863,1.366)
N9: (-174.574,43.326,2.768)
O5': (-172.124,40.591,3.318)
O3': (-172.816,42.637,6.836)
OP2: (-172.539,38.841,1.538)
C3': (-173.120,42.696,5.457)
C1': (-173.488,43.979,3.524)
C5': (-171.350,41.252,4.306)
O4': (-172.313,43.227,3.328)
C8: (-174.460,42.243,1.920)
O2': (-173.098,45.124,5.596)
C6: (-177.893,42.902,1.693)
C5: (-176.510,42.763,1.890)
C4: (-175.902,43.673,2.748)
P: (-171.527,39.361,2.497)
C4': (-171.886,42.629,4.576)
C2': (-173.767,44.005,5.023)
C2: (-177.804,44.699,3.146)
N1: (-178.527,43.901,2.347)
N3: (-176.498,44.678,3.416)
N6: (-178.593,42.097,0.892)
N7: (-175.592,41.863,1.366)
N9: (-174.574,43.326,2.768)
O5': (-172.124,40.591,3.318)
O3': (-172.816,42.637,6.836)
OP1: (-184.934,37.952,-4.784)
OP2: (-182.727,36.675,-4.881)
C3': (-181.543,41.308,-2.768)
C1': (-180.330,40.186,-1.114)
C5': (-183.533,39.687,-2.635)
O4': (-181.653,39.673,-1.103)
C8: (-179.841,38.285,-2.753)
O2': (-180.683,42.540,-0.867)
C6: (-176.358,37.836,-2.708)
C5: (-177.726,38.139,-2.614)
C4: (-178.091,39.160,-1.742)
P: (-183.670,37.543,-4.132)
C4': (-182.520,40.529,-1.900)
C2': (-180.377,41.532,-1.822)
C2: (-176.009,39.529,-1.143)
N1: (-175.513,38.565,-1.941)
N3: (-177.273,39.908,-0.968)
N6: (-175.871,36.878,-3.502)
N7: (-178.840,37.596,-3.243)
N9: (-179.463,39.236,-1.833)
O5': (-182.908,38.822,-3.571)
O3': (-182.071,42.502,-3.294)
OP2: (-182.727,36.675,-4.881)
C3': (-181.543,41.308,-2.768)
C1': (-180.330,40.186,-1.114)
C5': (-183.533,39.687,-2.635)
O4': (-181.653,39.673,-1.103)
C8: (-179.841,38.285,-2.753)
O2': (-180.683,42.540,-0.867)
C6: (-176.358,37.836,-2.708)
C5: (-177.726,38.139,-2.614)
C4: (-178.091,39.160,-1.742)
P: (-183.670,37.543,-4.132)
C4': (-182.520,40.529,-1.900)
C2': (-180.377,41.532,-1.822)
C2: (-176.009,39.529,-1.143)
N1: (-175.513,38.565,-1.941)
N3: (-177.273,39.908,-0.968)
N6: (-175.871,36.878,-3.502)
N7: (-178.840,37.596,-3.243)
N9: (-179.463,39.236,-1.833)
O5': (-182.908,38.822,-3.571)
O3': (-182.071,42.502,-3.294)
Image (generated by PyMOL):