Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VBX:B55:B56
Extra
PDB:
ATOM 1 O3' C A 54 54.254 49.200 86.476 1.00 59.30 O
ATOM 2 P U A 55 55.402 49.565 85.423 1.00 64.81 P
ATOM 3 OP1 U A 55 55.494 48.472 84.421 1.00 66.15 O
ATOM 4 OP2 U A 55 56.590 49.935 86.214 1.00 64.98 O
ATOM 5 O5' U A 55 54.865 50.874 84.697 1.00 69.06 O
ATOM 6 C5' U A 55 54.734 52.107 85.401 1.00 75.76 C
ATOM 7 C4' U A 55 54.405 53.224 84.432 1.00 80.40 C
ATOM 8 O4' U A 55 55.588 53.603 83.672 1.00 83.15 O
ATOM 9 C3' U A 55 53.314 52.890 83.414 1.00 82.05 C
ATOM 10 O3' U A 55 52.514 54.028 83.174 1.00 83.58 O
ATOM 11 C2' U A 55 54.094 52.599 82.135 1.00 83.55 C
ATOM 12 O2' U A 55 53.370 52.955 80.973 1.00 82.65 O
ATOM 13 C1' U A 55 55.311 53.514 82.285 1.00 85.18 C
ATOM 14 N1 U A 55 56.507 53.002 81.595 1.00 86.98 N
ATOM 15 C2 U A 55 57.062 53.792 80.606 1.00 87.29 C
ATOM 16 O2 U A 55 56.601 54.871 80.285 1.00 86.76 O
ATOM 17 N3 U A 55 58.173 53.269 80.001 1.00 88.39 N
ATOM 18 C4 U A 55 58.775 52.059 80.272 1.00 89.96 C
ATOM 19 O4 U A 55 59.781 51.731 79.639 1.00 91.92 O
ATOM 20 C5 U A 55 58.143 51.293 81.303 1.00 89.20 C
ATOM 21 C6 U A 55 57.060 51.780 81.917 1.00 88.21 C
ATOM 22 P C A 56 51.303 54.378 84.163 1.00 83.86 P
ATOM 23 OP1 C A 56 51.610 53.823 85.508 1.00 84.09 O
ATOM 24 OP2 C A 56 50.046 53.988 83.476 1.00 83.16 O
ATOM 25 O5' C A 56 51.389 55.969 84.215 1.00 84.44 O
TER
ATOM 1 O3' U B 55 52.514 54.028 83.174 1.00 83.58 O
ATOM 2 P C B 56 51.303 54.378 84.163 1.00 83.86 P
ATOM 3 OP1 C B 56 51.610 53.823 85.508 1.00 84.09 O
ATOM 4 OP2 C B 56 50.046 53.988 83.476 1.00 83.16 O
ATOM 5 O5' C B 56 51.389 55.969 84.215 1.00 84.44 O
ATOM 6 C5' C B 56 50.286 56.766 84.629 1.00 82.45 C
ATOM 7 C4' C B 56 50.088 57.919 83.667 1.00 80.78 C
ATOM 8 O4' C B 56 51.366 58.563 83.430 1.00 82.30 O
ATOM 9 C3' C B 56 49.606 57.548 82.275 1.00 78.80 C
ATOM 10 O3' C B 56 48.197 57.506 82.244 1.00 74.54 O
ATOM 11 C2' C B 56 50.104 58.696 81.410 1.00 80.53 C
ATOM 12 O2' C B 56 49.229 59.804 81.446 1.00 80.84 O
ATOM 13 C1' C B 56 51.411 59.070 82.105 1.00 82.85 C
ATOM 14 N1 C B 56 52.620 58.554 81.436 1.00 85.56 N
ATOM 15 C2 C B 56 52.964 59.076 80.185 1.00 87.27 C
ATOM 16 O2 C B 56 52.236 59.945 79.673 1.00 87.66 O
ATOM 17 N3 C B 56 54.080 58.620 79.564 1.00 88.13 N
ATOM 18 C4 C B 56 54.835 57.684 80.145 1.00 88.87 C
ATOM 19 N4 C B 56 55.930 57.271 79.493 1.00 88.50 N
ATOM 20 C5 C B 56 54.504 57.131 81.418 1.00 88.81 C
ATOM 21 C6 C B 56 53.395 57.592 82.022 1.00 87.22 C
ATOM 22 P C B 57 47.458 56.745 81.051 1.00 71.25 P
ATOM 23 OP1 C B 57 46.001 57.011 81.165 1.00 70.53 O
ATOM 24 OP2 C B 57 47.964 55.355 81.059 1.00 71.15 O
ATOM 25 O5' C B 57 47.989 57.461 79.738 1.00 69.99 O
TER
ATOM 2 P U A 55 55.402 49.565 85.423 1.00 64.81 P
ATOM 3 OP1 U A 55 55.494 48.472 84.421 1.00 66.15 O
ATOM 4 OP2 U A 55 56.590 49.935 86.214 1.00 64.98 O
ATOM 5 O5' U A 55 54.865 50.874 84.697 1.00 69.06 O
ATOM 6 C5' U A 55 54.734 52.107 85.401 1.00 75.76 C
ATOM 7 C4' U A 55 54.405 53.224 84.432 1.00 80.40 C
ATOM 8 O4' U A 55 55.588 53.603 83.672 1.00 83.15 O
ATOM 9 C3' U A 55 53.314 52.890 83.414 1.00 82.05 C
ATOM 10 O3' U A 55 52.514 54.028 83.174 1.00 83.58 O
ATOM 11 C2' U A 55 54.094 52.599 82.135 1.00 83.55 C
ATOM 12 O2' U A 55 53.370 52.955 80.973 1.00 82.65 O
ATOM 13 C1' U A 55 55.311 53.514 82.285 1.00 85.18 C
ATOM 14 N1 U A 55 56.507 53.002 81.595 1.00 86.98 N
ATOM 15 C2 U A 55 57.062 53.792 80.606 1.00 87.29 C
ATOM 16 O2 U A 55 56.601 54.871 80.285 1.00 86.76 O
ATOM 17 N3 U A 55 58.173 53.269 80.001 1.00 88.39 N
ATOM 18 C4 U A 55 58.775 52.059 80.272 1.00 89.96 C
ATOM 19 O4 U A 55 59.781 51.731 79.639 1.00 91.92 O
ATOM 20 C5 U A 55 58.143 51.293 81.303 1.00 89.20 C
ATOM 21 C6 U A 55 57.060 51.780 81.917 1.00 88.21 C
ATOM 22 P C A 56 51.303 54.378 84.163 1.00 83.86 P
ATOM 23 OP1 C A 56 51.610 53.823 85.508 1.00 84.09 O
ATOM 24 OP2 C A 56 50.046 53.988 83.476 1.00 83.16 O
ATOM 25 O5' C A 56 51.389 55.969 84.215 1.00 84.44 O
TER
ATOM 1 O3' U B 55 52.514 54.028 83.174 1.00 83.58 O
ATOM 2 P C B 56 51.303 54.378 84.163 1.00 83.86 P
ATOM 3 OP1 C B 56 51.610 53.823 85.508 1.00 84.09 O
ATOM 4 OP2 C B 56 50.046 53.988 83.476 1.00 83.16 O
ATOM 5 O5' C B 56 51.389 55.969 84.215 1.00 84.44 O
ATOM 6 C5' C B 56 50.286 56.766 84.629 1.00 82.45 C
ATOM 7 C4' C B 56 50.088 57.919 83.667 1.00 80.78 C
ATOM 8 O4' C B 56 51.366 58.563 83.430 1.00 82.30 O
ATOM 9 C3' C B 56 49.606 57.548 82.275 1.00 78.80 C
ATOM 10 O3' C B 56 48.197 57.506 82.244 1.00 74.54 O
ATOM 11 C2' C B 56 50.104 58.696 81.410 1.00 80.53 C
ATOM 12 O2' C B 56 49.229 59.804 81.446 1.00 80.84 O
ATOM 13 C1' C B 56 51.411 59.070 82.105 1.00 82.85 C
ATOM 14 N1 C B 56 52.620 58.554 81.436 1.00 85.56 N
ATOM 15 C2 C B 56 52.964 59.076 80.185 1.00 87.27 C
ATOM 16 O2 C B 56 52.236 59.945 79.673 1.00 87.66 O
ATOM 17 N3 C B 56 54.080 58.620 79.564 1.00 88.13 N
ATOM 18 C4 C B 56 54.835 57.684 80.145 1.00 88.87 C
ATOM 19 N4 C B 56 55.930 57.271 79.493 1.00 88.50 N
ATOM 20 C5 C B 56 54.504 57.131 81.418 1.00 88.81 C
ATOM 21 C6 C B 56 53.395 57.592 82.022 1.00 87.22 C
ATOM 22 P C B 57 47.458 56.745 81.051 1.00 71.25 P
ATOM 23 OP1 C B 57 46.001 57.011 81.165 1.00 70.53 O
ATOM 24 OP2 C B 57 47.964 55.355 81.059 1.00 71.15 O
ATOM 25 O5' C B 57 47.989 57.461 79.738 1.00 69.99 O
TER
Atoms:
C4: (58.775,52.059,80.272)
N3: (58.173,53.269,80.001)
OP1: (55.494,48.472,84.421)
OP2: (56.590,49.935,86.214)
C2: (57.062,53.792,80.606)
C1': (55.311,53.514,82.285)
C3': (53.314,52.890,83.414)
O5': (54.865,50.874,84.697)
O4': (55.588,53.603,83.672)
C5': (54.734,52.107,85.401)
P: (55.402,49.565,85.423)
C4': (54.405,53.224,84.432)
C2': (54.094,52.599,82.135)
O2': (53.370,52.955,80.973)
N1: (56.507,53.002,81.595)
O4: (59.781,51.731,79.639)
O2: (56.601,54.871,80.285)
C6: (57.060,51.780,81.917)
C5: (58.143,51.293,81.303)
O3': (52.514,54.028,83.174)
N3: (58.173,53.269,80.001)
OP1: (55.494,48.472,84.421)
OP2: (56.590,49.935,86.214)
C2: (57.062,53.792,80.606)
C1': (55.311,53.514,82.285)
C3': (53.314,52.890,83.414)
O5': (54.865,50.874,84.697)
O4': (55.588,53.603,83.672)
C5': (54.734,52.107,85.401)
P: (55.402,49.565,85.423)
C4': (54.405,53.224,84.432)
C2': (54.094,52.599,82.135)
O2': (53.370,52.955,80.973)
N1: (56.507,53.002,81.595)
O4: (59.781,51.731,79.639)
O2: (56.601,54.871,80.285)
C6: (57.060,51.780,81.917)
C5: (58.143,51.293,81.303)
O3': (52.514,54.028,83.174)
C2: (52.964,59.076,80.185)
OP1: (51.610,53.823,85.508)
OP2: (50.046,53.988,83.476)
C4: (54.835,57.684,80.145)
O5': (51.389,55.969,84.215)
C3': (49.606,57.548,82.275)
C1': (51.411,59.070,82.105)
O4': (51.366,58.563,83.430)
C5': (50.286,56.766,84.629)
P: (51.303,54.378,84.163)
O2: (52.236,59.945,79.673)
C4': (50.088,57.919,83.667)
C2': (50.104,58.696,81.410)
O2': (49.229,59.804,81.446)
N1: (52.620,58.554,81.436)
N3: (54.080,58.620,79.564)
N4: (55.930,57.271,79.493)
C6: (53.395,57.592,82.022)
C5: (54.504,57.131,81.418)
O3': (48.197,57.506,82.244)
OP1: (51.610,53.823,85.508)
OP2: (50.046,53.988,83.476)
C4: (54.835,57.684,80.145)
O5': (51.389,55.969,84.215)
C3': (49.606,57.548,82.275)
C1': (51.411,59.070,82.105)
O4': (51.366,58.563,83.430)
C5': (50.286,56.766,84.629)
P: (51.303,54.378,84.163)
O2: (52.236,59.945,79.673)
C4': (50.088,57.919,83.667)
C2': (50.104,58.696,81.410)
O2': (49.229,59.804,81.446)
N1: (52.620,58.554,81.436)
N3: (54.080,58.620,79.564)
N4: (55.930,57.271,79.493)
C6: (53.395,57.592,82.022)
C5: (54.504,57.131,81.418)
O3': (48.197,57.506,82.244)
Image (generated by PyMOL):