Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A411:A2404
Extra
PDB:
ATOM 1 O3' G A 410 -92.858 -44.946 73.544 1.00 2.12 O
ATOM 2 P A A 411 -93.947 -43.890 74.073 1.00 0.01 P
ATOM 3 OP1 A A 411 -93.575 -43.545 75.478 1.00 0.01 O
ATOM 4 OP2 A A 411 -95.286 -44.480 73.805 1.00 0.01 O
ATOM 5 O5' A A 411 -93.699 -42.640 73.125 1.00 0.01 O
ATOM 6 C5' A A 411 -92.437 -42.007 73.080 1.00 0.01 C
ATOM 7 C4' A A 411 -92.486 -40.754 72.245 1.00 0.01 C
ATOM 8 O4' A A 411 -93.557 -40.853 71.268 1.00 0.01 O
ATOM 9 C3' A A 411 -92.789 -39.478 72.998 1.00 0.01 C
ATOM 10 O3' A A 411 -91.644 -38.905 73.553 1.00 0.01 O
ATOM 11 C2' A A 411 -93.421 -38.615 71.941 1.00 0.01 C
ATOM 12 O2' A A 411 -92.424 -38.118 71.071 1.00 0.01 O
ATOM 13 C1' A A 411 -94.259 -39.644 71.199 1.00 0.01 C
ATOM 14 N9 A A 411 -95.543 -39.851 71.865 1.00 0.01 N
ATOM 15 C8 A A 411 -95.925 -41.010 72.442 1.00 0.01 C
ATOM 16 N7 A A 411 -97.083 -40.949 73.025 1.00 0.01 N
ATOM 17 C5 A A 411 -97.480 -39.661 72.829 1.00 0.01 C
ATOM 18 C6 A A 411 -98.635 -38.996 73.210 1.00 0.01 C
ATOM 19 N6 A A 411 -99.591 -39.607 73.882 1.00 0.01 N
ATOM 20 N1 A A 411 -98.780 -37.706 72.872 1.00 0.01 N
ATOM 21 C2 A A 411 -97.795 -37.151 72.176 1.00 0.01 C
ATOM 22 N3 A A 411 -96.645 -37.682 71.756 1.00 0.01 N
ATOM 23 C4 A A 411 -96.542 -38.963 72.121 1.00 0.01 C
ATOM 24 P C A 412 -91.533 -38.764 75.125 1.00 4.78 P
ATOM 25 OP1 C A 412 -90.407 -37.846 75.402 1.00 4.78 O
ATOM 26 OP2 C A 412 -91.491 -40.134 75.685 1.00 4.78 O
ATOM 27 O5' C A 412 -92.893 -38.064 75.492 1.00 4.78 O
TER
ATOM 1 O3' G B2403 -107.487 -42.183 78.538 1.00 7.50 O
ATOM 2 P A B2404 -107.614 -42.477 76.974 1.00 1.97 P
ATOM 3 OP1 A B2404 -108.829 -41.761 76.488 1.00 1.97 O
ATOM 4 OP2 A B2404 -107.537 -43.957 76.819 1.00 1.97 O
ATOM 5 O5' A B2404 -106.317 -41.779 76.372 1.00 1.97 O
ATOM 6 C5' A B2404 -106.179 -40.367 76.441 1.00 1.97 C
ATOM 7 C4' A B2404 -104.880 -39.882 75.840 1.00 1.97 C
ATOM 8 O4' A B2404 -103.754 -40.393 76.603 1.00 1.97 O
ATOM 9 C3' A B2404 -104.608 -40.299 74.407 1.00 1.97 C
ATOM 10 O3' A B2404 -105.227 -39.434 73.472 1.00 1.97 O
ATOM 11 C2' A B2404 -103.096 -40.260 74.343 1.00 1.97 C
ATOM 12 O2' A B2404 -102.646 -38.932 74.179 1.00 1.97 O
ATOM 13 C1' A B2404 -102.708 -40.734 75.738 1.00 1.97 C
ATOM 14 N9 A B2404 -102.524 -42.194 75.782 1.00 2.23 N
ATOM 15 C8 A B2404 -103.422 -43.181 76.130 1.00 2.23 C
ATOM 16 N7 A B2404 -102.926 -44.396 76.054 1.00 2.23 N
ATOM 17 C5 A B2404 -101.616 -44.210 75.609 1.00 2.23 C
ATOM 18 C6 A B2404 -100.538 -45.085 75.310 1.00 2.23 C
ATOM 19 N6 A B2404 -100.566 -46.402 75.407 1.00 2.23 N
ATOM 20 N1 A B2404 -99.375 -44.555 74.898 1.00 2.23 N
ATOM 21 C2 A B2404 -99.294 -43.224 74.784 1.00 2.23 C
ATOM 22 N3 A B2404 -100.210 -42.288 75.035 1.00 2.23 N
ATOM 23 C4 A B2404 -101.364 -42.850 75.442 1.00 2.23 C
ATOM 24 P A B2405 -105.452 -39.868 71.930 1.00 0.24 P
ATOM 25 OP1 A B2405 -106.036 -38.693 71.237 1.00 0.24 O
ATOM 26 OP2 A B2405 -106.199 -41.147 71.930 1.00 0.24 O
ATOM 27 O5' A B2405 -103.972 -40.114 71.396 1.00 0.24 O
TER
ATOM 2 P A A 411 -93.947 -43.890 74.073 1.00 0.01 P
ATOM 3 OP1 A A 411 -93.575 -43.545 75.478 1.00 0.01 O
ATOM 4 OP2 A A 411 -95.286 -44.480 73.805 1.00 0.01 O
ATOM 5 O5' A A 411 -93.699 -42.640 73.125 1.00 0.01 O
ATOM 6 C5' A A 411 -92.437 -42.007 73.080 1.00 0.01 C
ATOM 7 C4' A A 411 -92.486 -40.754 72.245 1.00 0.01 C
ATOM 8 O4' A A 411 -93.557 -40.853 71.268 1.00 0.01 O
ATOM 9 C3' A A 411 -92.789 -39.478 72.998 1.00 0.01 C
ATOM 10 O3' A A 411 -91.644 -38.905 73.553 1.00 0.01 O
ATOM 11 C2' A A 411 -93.421 -38.615 71.941 1.00 0.01 C
ATOM 12 O2' A A 411 -92.424 -38.118 71.071 1.00 0.01 O
ATOM 13 C1' A A 411 -94.259 -39.644 71.199 1.00 0.01 C
ATOM 14 N9 A A 411 -95.543 -39.851 71.865 1.00 0.01 N
ATOM 15 C8 A A 411 -95.925 -41.010 72.442 1.00 0.01 C
ATOM 16 N7 A A 411 -97.083 -40.949 73.025 1.00 0.01 N
ATOM 17 C5 A A 411 -97.480 -39.661 72.829 1.00 0.01 C
ATOM 18 C6 A A 411 -98.635 -38.996 73.210 1.00 0.01 C
ATOM 19 N6 A A 411 -99.591 -39.607 73.882 1.00 0.01 N
ATOM 20 N1 A A 411 -98.780 -37.706 72.872 1.00 0.01 N
ATOM 21 C2 A A 411 -97.795 -37.151 72.176 1.00 0.01 C
ATOM 22 N3 A A 411 -96.645 -37.682 71.756 1.00 0.01 N
ATOM 23 C4 A A 411 -96.542 -38.963 72.121 1.00 0.01 C
ATOM 24 P C A 412 -91.533 -38.764 75.125 1.00 4.78 P
ATOM 25 OP1 C A 412 -90.407 -37.846 75.402 1.00 4.78 O
ATOM 26 OP2 C A 412 -91.491 -40.134 75.685 1.00 4.78 O
ATOM 27 O5' C A 412 -92.893 -38.064 75.492 1.00 4.78 O
TER
ATOM 1 O3' G B2403 -107.487 -42.183 78.538 1.00 7.50 O
ATOM 2 P A B2404 -107.614 -42.477 76.974 1.00 1.97 P
ATOM 3 OP1 A B2404 -108.829 -41.761 76.488 1.00 1.97 O
ATOM 4 OP2 A B2404 -107.537 -43.957 76.819 1.00 1.97 O
ATOM 5 O5' A B2404 -106.317 -41.779 76.372 1.00 1.97 O
ATOM 6 C5' A B2404 -106.179 -40.367 76.441 1.00 1.97 C
ATOM 7 C4' A B2404 -104.880 -39.882 75.840 1.00 1.97 C
ATOM 8 O4' A B2404 -103.754 -40.393 76.603 1.00 1.97 O
ATOM 9 C3' A B2404 -104.608 -40.299 74.407 1.00 1.97 C
ATOM 10 O3' A B2404 -105.227 -39.434 73.472 1.00 1.97 O
ATOM 11 C2' A B2404 -103.096 -40.260 74.343 1.00 1.97 C
ATOM 12 O2' A B2404 -102.646 -38.932 74.179 1.00 1.97 O
ATOM 13 C1' A B2404 -102.708 -40.734 75.738 1.00 1.97 C
ATOM 14 N9 A B2404 -102.524 -42.194 75.782 1.00 2.23 N
ATOM 15 C8 A B2404 -103.422 -43.181 76.130 1.00 2.23 C
ATOM 16 N7 A B2404 -102.926 -44.396 76.054 1.00 2.23 N
ATOM 17 C5 A B2404 -101.616 -44.210 75.609 1.00 2.23 C
ATOM 18 C6 A B2404 -100.538 -45.085 75.310 1.00 2.23 C
ATOM 19 N6 A B2404 -100.566 -46.402 75.407 1.00 2.23 N
ATOM 20 N1 A B2404 -99.375 -44.555 74.898 1.00 2.23 N
ATOM 21 C2 A B2404 -99.294 -43.224 74.784 1.00 2.23 C
ATOM 22 N3 A B2404 -100.210 -42.288 75.035 1.00 2.23 N
ATOM 23 C4 A B2404 -101.364 -42.850 75.442 1.00 2.23 C
ATOM 24 P A B2405 -105.452 -39.868 71.930 1.00 0.24 P
ATOM 25 OP1 A B2405 -106.036 -38.693 71.237 1.00 0.24 O
ATOM 26 OP2 A B2405 -106.199 -41.147 71.930 1.00 0.24 O
ATOM 27 O5' A B2405 -103.972 -40.114 71.396 1.00 0.24 O
TER
Atoms:
OP1: (-93.575,-43.545,75.478)
OP2: (-95.286,-44.480,73.805)
C3': (-92.789,-39.478,72.998)
C1': (-94.259,-39.644,71.199)
C5': (-92.437,-42.007,73.080)
O4': (-93.557,-40.853,71.268)
C8: (-95.925,-41.010,72.442)
O2': (-92.424,-38.118,71.071)
C6: (-98.635,-38.996,73.210)
C5: (-97.480,-39.661,72.829)
C4: (-96.542,-38.963,72.121)
P: (-93.947,-43.890,74.073)
C4': (-92.486,-40.754,72.245)
C2': (-93.421,-38.615,71.941)
C2: (-97.795,-37.151,72.176)
N1: (-98.780,-37.706,72.872)
N3: (-96.645,-37.682,71.756)
N6: (-99.591,-39.607,73.882)
N7: (-97.083,-40.949,73.025)
N9: (-95.543,-39.851,71.865)
O5': (-93.699,-42.640,73.125)
O3': (-91.644,-38.905,73.553)
OP2: (-95.286,-44.480,73.805)
C3': (-92.789,-39.478,72.998)
C1': (-94.259,-39.644,71.199)
C5': (-92.437,-42.007,73.080)
O4': (-93.557,-40.853,71.268)
C8: (-95.925,-41.010,72.442)
O2': (-92.424,-38.118,71.071)
C6: (-98.635,-38.996,73.210)
C5: (-97.480,-39.661,72.829)
C4: (-96.542,-38.963,72.121)
P: (-93.947,-43.890,74.073)
C4': (-92.486,-40.754,72.245)
C2': (-93.421,-38.615,71.941)
C2: (-97.795,-37.151,72.176)
N1: (-98.780,-37.706,72.872)
N3: (-96.645,-37.682,71.756)
N6: (-99.591,-39.607,73.882)
N7: (-97.083,-40.949,73.025)
N9: (-95.543,-39.851,71.865)
O5': (-93.699,-42.640,73.125)
O3': (-91.644,-38.905,73.553)
OP1: (-108.829,-41.761,76.488)
OP2: (-107.537,-43.957,76.819)
C3': (-104.608,-40.299,74.407)
C1': (-102.708,-40.734,75.738)
C5': (-106.179,-40.367,76.441)
O4': (-103.754,-40.393,76.603)
C8: (-103.422,-43.181,76.130)
O2': (-102.646,-38.932,74.179)
C6: (-100.538,-45.085,75.310)
C5: (-101.616,-44.210,75.609)
C4: (-101.364,-42.850,75.442)
P: (-107.614,-42.477,76.974)
C4': (-104.880,-39.882,75.840)
C2': (-103.096,-40.260,74.343)
C2: (-99.294,-43.224,74.784)
N1: (-99.375,-44.555,74.898)
N3: (-100.210,-42.288,75.035)
N6: (-100.566,-46.402,75.407)
N7: (-102.926,-44.396,76.054)
N9: (-102.524,-42.194,75.782)
O5': (-106.317,-41.779,76.372)
O3': (-105.227,-39.434,73.472)
OP2: (-107.537,-43.957,76.819)
C3': (-104.608,-40.299,74.407)
C1': (-102.708,-40.734,75.738)
C5': (-106.179,-40.367,76.441)
O4': (-103.754,-40.393,76.603)
C8: (-103.422,-43.181,76.130)
O2': (-102.646,-38.932,74.179)
C6: (-100.538,-45.085,75.310)
C5: (-101.616,-44.210,75.609)
C4: (-101.364,-42.850,75.442)
P: (-107.614,-42.477,76.974)
C4': (-104.880,-39.882,75.840)
C2': (-103.096,-40.260,74.343)
C2: (-99.294,-43.224,74.784)
N1: (-99.375,-44.555,74.898)
N3: (-100.210,-42.288,75.035)
N6: (-100.566,-46.402,75.407)
N7: (-102.926,-44.396,76.054)
N9: (-102.524,-42.194,75.782)
O5': (-106.317,-41.779,76.372)
O3': (-105.227,-39.434,73.472)
Image (generated by PyMOL):