ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1375:1388

Extra

PDB:
ATOM 1 O3' A A 374 87.629 37.871 97.454 1.00 64.78 O
ATOM 2 P A A 375 86.567 39.029 97.766 1.00 63.39 P
ATOM 3 OP1 A A 375 85.500 38.441 98.613 1.00 63.22 O
ATOM 4 OP2 A A 375 86.202 39.641 96.465 1.00 63.18 O
ATOM 5 O5' A A 375 87.428 40.048 98.634 1.00 64.10 O
ATOM 6 C5' A A 375 87.757 39.743 99.987 1.00 64.44 C
ATOM 7 C4' A A 375 89.139 40.239 100.372 1.00 64.99 C
ATOM 8 O4' A A 375 90.154 39.506 99.648 1.00 64.80 O
ATOM 9 C3' A A 375 89.448 41.688 100.060 1.00 65.42 C
ATOM 10 O3' A A 375 88.905 42.579 101.004 1.00 65.84 O
ATOM 11 C2' A A 375 90.965 41.701 100.016 1.00 65.75 C
ATOM 12 O2' A A 375 91.516 41.740 101.320 1.00 66.25 O
ATOM 13 C1' A A 375 91.267 40.334 99.421 1.00 65.24 C
ATOM 14 N9 A A 375 91.512 40.411 97.980 1.00 64.94 N
ATOM 15 C8 A A 375 90.809 39.821 97.000 1.00 64.35 C
ATOM 16 N7 A A 375 91.292 40.080 95.820 1.00 64.25 N
ATOM 17 C5 A A 375 92.358 40.886 96.028 1.00 64.79 C
ATOM 18 C6 A A 375 93.244 41.455 95.123 1.00 64.94 C
ATOM 19 N6 A A 375 93.141 41.273 93.811 1.00 64.55 N
ATOM 20 N1 A A 375 94.240 42.224 95.637 1.00 65.54 N
ATOM 21 C2 A A 375 94.282 42.373 96.991 1.00 65.94 C
ATOM 22 N3 A A 375 93.485 41.871 97.962 1.00 65.84 N
ATOM 23 C4 A A 375 92.522 41.114 97.375 1.00 65.23 C
ATOM 24 P C A 376 88.012 43.829 100.521 1.00 67.94 P
ATOM 25 OP1 C A 376 87.827 44.713 101.711 1.00 68.52 O
ATOM 26 OP2 C A 376 86.796 43.279 99.848 1.00 67.32 O
ATOM 27 O5' C A 376 88.944 44.545 99.444 1.00 68.08 O
TER

ATOM 1 O3' G B 387 92.071 41.872 84.818 1.00 56.23 O
ATOM 2 P A B 388 92.684 40.385 84.880 1.00 63.59 P
ATOM 3 OP1 A B 388 93.707 40.298 83.798 1.00 63.60 O
ATOM 4 OP2 A B 388 91.535 39.423 84.849 1.00 63.04 O
ATOM 5 O5' A B 388 93.382 40.364 86.318 1.00 64.00 O
ATOM 6 C5' A B 388 94.164 41.465 86.753 1.00 64.59 C
ATOM 7 C4' A B 388 93.987 41.747 88.220 1.00 64.92 C
ATOM 8 O4' A B 388 92.587 41.991 88.521 1.00 64.74 O
ATOM 9 C3' A B 388 94.346 40.629 89.166 1.00 64.86 C
ATOM 10 O3' A B 388 95.726 40.467 89.331 1.00 65.18 O
ATOM 11 C2' A B 388 93.626 41.062 90.429 1.00 65.09 C
ATOM 12 O2' A B 388 94.272 42.181 91.006 1.00 65.70 O
ATOM 13 C1' A B 388 92.304 41.541 89.838 1.00 64.80 C
ATOM 14 N9 A B 388 91.332 40.443 89.763 1.00 64.24 N
ATOM 15 C8 A B 388 90.827 39.827 88.660 1.00 63.72 C
ATOM 16 N7 A B 388 90.011 38.843 88.975 1.00 63.32 N
ATOM 17 C5 A B 388 89.982 38.805 90.364 1.00 63.58 C
ATOM 18 C6 A B 388 89.322 38.007 91.311 1.00 63.41 C
ATOM 19 N6 A B 388 88.499 37.024 91.049 1.00 62.90 N
ATOM 20 N1 A B 388 89.513 38.239 92.603 1.00 63.80 N
ATOM 21 C2 A B 388 90.332 39.226 92.929 1.00 64.34 C
ATOM 22 N3 A B 388 91.037 40.046 92.145 1.00 64.56 N
ATOM 23 C4 A B 388 90.816 39.784 90.851 1.00 64.15 C
ATOM 24 P G B 389 96.389 39.019 89.161 1.00 59.61 P
ATOM 25 OP1 G B 389 97.861 39.204 89.168 1.00 60.03 O
ATOM 26 OP2 G B 389 95.764 38.385 87.977 1.00 59.03 O
ATOM 27 O5' G B 389 95.927 38.265 90.486 1.00 59.56 O
TER

Atoms:
OP1: (85.500,38.441,98.613)
OP2: (86.202,39.641,96.465)
C3': (89.448,41.688,100.060)
C1': (91.267,40.334,99.421)
C5': (87.757,39.743,99.987)
O4': (90.154,39.506,99.648)
C8: (90.809,39.821,97.000)
O2': (91.516,41.740,101.320)
C6: (93.244,41.455,95.123)
C5: (92.358,40.886,96.028)
C4: (92.522,41.114,97.375)
P: (86.567,39.029,97.766)
C4': (89.139,40.239,100.372)
C2': (90.965,41.701,100.016)
C2: (94.282,42.373,96.991)
N1: (94.240,42.224,95.637)
N3: (93.485,41.871,97.962)
N6: (93.141,41.273,93.811)
N7: (91.292,40.080,95.820)
N9: (91.512,40.411,97.980)
O5': (87.428,40.048,98.634)
O3': (88.905,42.579,101.004)
OP1: (93.707,40.298,83.798)
OP2: (91.535,39.423,84.849)
C3': (94.346,40.629,89.166)
C1': (92.304,41.541,89.838)
C5': (94.164,41.465,86.753)
O4': (92.587,41.991,88.521)
C8: (90.827,39.827,88.660)
O2': (94.272,42.181,91.006)
C6: (89.322,38.007,91.311)
C5: (89.982,38.805,90.364)
C4: (90.816,39.784,90.851)
P: (92.684,40.385,84.880)
C4': (93.987,41.747,88.220)
C2': (93.626,41.062,90.429)
C2: (90.332,39.226,92.929)
N1: (89.513,38.239,92.603)
N3: (91.037,40.046,92.145)
N6: (88.499,37.024,91.049)
N7: (90.011,38.843,88.975)
N9: (91.332,40.443,89.763)
O5': (93.382,40.364,86.318)
O3': (95.726,40.467,89.331)
Image (generated by PyMOL):
PyMOL image
show in jmol