Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1940:1997
Extra
PDB:
ATOM 1 O3' U A 939 30.140 -36.942 29.407 1.00 47.97 O
ATOM 2 P A A 940 29.340 -36.622 28.077 1.00 43.01 P
ATOM 3 OP1 A A 940 28.405 -35.577 28.379 1.00 42.82 O
ATOM 4 OP2 A A 940 28.817 -37.910 27.530 1.00 43.43 O
ATOM 5 O5' A A 940 30.483 -36.074 27.142 1.00 43.06 O
ATOM 6 C5' A A 940 31.025 -34.789 27.329 1.00 42.75 C
ATOM 7 C4' A A 940 31.993 -34.477 26.239 1.00 42.91 C
ATOM 8 O4' A A 940 32.973 -35.511 26.193 1.00 43.04 O
ATOM 9 C3' A A 940 31.425 -34.498 24.852 1.00 43.33 C
ATOM 10 O3' A A 940 30.751 -33.321 24.539 1.00 43.27 O
ATOM 11 C2' A A 940 32.643 -34.712 24.007 1.00 43.51 C
ATOM 12 O2' A A 940 33.375 -33.499 23.951 1.00 43.27 O
ATOM 13 C1' A A 940 33.399 -35.709 24.872 1.00 43.40 C
ATOM 14 N9 A A 940 33.131 -37.125 24.525 1.00 43.78 N
ATOM 15 C8 A A 940 32.441 -38.042 25.313 1.00 43.78 C
ATOM 16 N7 A A 940 32.403 -39.266 24.833 1.00 44.16 N
ATOM 17 C5 A A 940 33.121 -39.141 23.657 1.00 44.41 C
ATOM 18 C6 A A 940 33.453 -40.057 22.697 1.00 44.85 C
ATOM 19 N6 A A 940 33.071 -41.313 22.759 1.00 45.13 N
ATOM 20 N1 A A 940 34.193 -39.675 21.673 1.00 45.03 N
ATOM 21 C2 A A 940 34.575 -38.415 21.613 1.00 44.77 C
ATOM 22 N3 A A 940 34.362 -37.431 22.451 1.00 44.34 N
ATOM 23 C4 A A 940 33.609 -37.865 23.461 1.00 44.18 C
ATOM 24 P A A 941 29.304 -33.412 23.918 1.00 44.75 P
ATOM 25 OP1 A A 941 28.873 -32.025 23.641 1.00 44.64 O
ATOM 26 OP2 A A 941 28.532 -34.204 24.827 1.00 44.69 O
ATOM 27 O5' A A 941 29.549 -34.222 22.576 1.00 45.24 O
TER
ATOM 1 O3' U B 996 31.638 -49.733 19.669 1.00 46.30 O
ATOM 2 P A B 997 32.964 -49.985 20.609 1.00 46.49 P
ATOM 3 OP1 A B 997 33.936 -50.766 19.754 1.00 46.91 O
ATOM 4 OP2 A B 997 32.508 -50.580 21.906 1.00 46.29 O
ATOM 5 O5' A B 997 33.501 -48.498 20.867 1.00 45.98 O
ATOM 6 C5' A B 997 33.632 -47.594 19.796 1.00 46.07 C
ATOM 7 C4' A B 997 33.734 -46.185 20.278 1.00 45.56 C
ATOM 8 O4' A B 997 32.419 -45.700 20.665 1.00 45.41 O
ATOM 9 C3' A B 997 34.567 -45.962 21.526 1.00 45.08 C
ATOM 10 O3' A B 997 35.968 -46.021 21.310 1.00 45.09 O
ATOM 11 C2' A B 997 34.045 -44.608 22.007 1.00 44.64 C
ATOM 12 O2' A B 997 34.506 -43.557 21.173 1.00 44.62 O
ATOM 13 C1' A B 997 32.545 -44.795 21.758 1.00 44.85 C
ATOM 14 N9 A B 997 31.898 -45.394 22.937 1.00 44.69 N
ATOM 15 C8 A B 997 31.686 -46.727 23.156 1.00 44.97 C
ATOM 16 N7 A B 997 31.183 -46.946 24.340 1.00 44.72 N
ATOM 17 C5 A B 997 31.063 -45.685 24.934 1.00 44.26 C
ATOM 18 C6 A B 997 30.576 -45.239 26.186 1.00 43.84 C
ATOM 19 N6 A B 997 30.090 -46.057 27.115 1.00 43.82 N
ATOM 20 N1 A B 997 30.567 -43.902 26.438 1.00 43.46 N
ATOM 21 C2 A B 997 31.069 -43.087 25.499 1.00 43.49 C
ATOM 22 N3 A B 997 31.563 -43.388 24.299 1.00 43.86 N
ATOM 23 C4 A B 997 31.510 -44.712 24.066 1.00 44.24 C
ATOM 24 P A B 998 36.953 -46.382 22.546 1.00 48.11 P
ATOM 25 OP1 A B 998 38.215 -46.939 21.954 1.00 48.37 O
ATOM 26 OP2 A B 998 36.182 -47.213 23.525 1.00 48.07 O
ATOM 27 O5' A B 998 37.226 -44.952 23.205 1.00 47.56 O
TER
ATOM 2 P A A 940 29.340 -36.622 28.077 1.00 43.01 P
ATOM 3 OP1 A A 940 28.405 -35.577 28.379 1.00 42.82 O
ATOM 4 OP2 A A 940 28.817 -37.910 27.530 1.00 43.43 O
ATOM 5 O5' A A 940 30.483 -36.074 27.142 1.00 43.06 O
ATOM 6 C5' A A 940 31.025 -34.789 27.329 1.00 42.75 C
ATOM 7 C4' A A 940 31.993 -34.477 26.239 1.00 42.91 C
ATOM 8 O4' A A 940 32.973 -35.511 26.193 1.00 43.04 O
ATOM 9 C3' A A 940 31.425 -34.498 24.852 1.00 43.33 C
ATOM 10 O3' A A 940 30.751 -33.321 24.539 1.00 43.27 O
ATOM 11 C2' A A 940 32.643 -34.712 24.007 1.00 43.51 C
ATOM 12 O2' A A 940 33.375 -33.499 23.951 1.00 43.27 O
ATOM 13 C1' A A 940 33.399 -35.709 24.872 1.00 43.40 C
ATOM 14 N9 A A 940 33.131 -37.125 24.525 1.00 43.78 N
ATOM 15 C8 A A 940 32.441 -38.042 25.313 1.00 43.78 C
ATOM 16 N7 A A 940 32.403 -39.266 24.833 1.00 44.16 N
ATOM 17 C5 A A 940 33.121 -39.141 23.657 1.00 44.41 C
ATOM 18 C6 A A 940 33.453 -40.057 22.697 1.00 44.85 C
ATOM 19 N6 A A 940 33.071 -41.313 22.759 1.00 45.13 N
ATOM 20 N1 A A 940 34.193 -39.675 21.673 1.00 45.03 N
ATOM 21 C2 A A 940 34.575 -38.415 21.613 1.00 44.77 C
ATOM 22 N3 A A 940 34.362 -37.431 22.451 1.00 44.34 N
ATOM 23 C4 A A 940 33.609 -37.865 23.461 1.00 44.18 C
ATOM 24 P A A 941 29.304 -33.412 23.918 1.00 44.75 P
ATOM 25 OP1 A A 941 28.873 -32.025 23.641 1.00 44.64 O
ATOM 26 OP2 A A 941 28.532 -34.204 24.827 1.00 44.69 O
ATOM 27 O5' A A 941 29.549 -34.222 22.576 1.00 45.24 O
TER
ATOM 1 O3' U B 996 31.638 -49.733 19.669 1.00 46.30 O
ATOM 2 P A B 997 32.964 -49.985 20.609 1.00 46.49 P
ATOM 3 OP1 A B 997 33.936 -50.766 19.754 1.00 46.91 O
ATOM 4 OP2 A B 997 32.508 -50.580 21.906 1.00 46.29 O
ATOM 5 O5' A B 997 33.501 -48.498 20.867 1.00 45.98 O
ATOM 6 C5' A B 997 33.632 -47.594 19.796 1.00 46.07 C
ATOM 7 C4' A B 997 33.734 -46.185 20.278 1.00 45.56 C
ATOM 8 O4' A B 997 32.419 -45.700 20.665 1.00 45.41 O
ATOM 9 C3' A B 997 34.567 -45.962 21.526 1.00 45.08 C
ATOM 10 O3' A B 997 35.968 -46.021 21.310 1.00 45.09 O
ATOM 11 C2' A B 997 34.045 -44.608 22.007 1.00 44.64 C
ATOM 12 O2' A B 997 34.506 -43.557 21.173 1.00 44.62 O
ATOM 13 C1' A B 997 32.545 -44.795 21.758 1.00 44.85 C
ATOM 14 N9 A B 997 31.898 -45.394 22.937 1.00 44.69 N
ATOM 15 C8 A B 997 31.686 -46.727 23.156 1.00 44.97 C
ATOM 16 N7 A B 997 31.183 -46.946 24.340 1.00 44.72 N
ATOM 17 C5 A B 997 31.063 -45.685 24.934 1.00 44.26 C
ATOM 18 C6 A B 997 30.576 -45.239 26.186 1.00 43.84 C
ATOM 19 N6 A B 997 30.090 -46.057 27.115 1.00 43.82 N
ATOM 20 N1 A B 997 30.567 -43.902 26.438 1.00 43.46 N
ATOM 21 C2 A B 997 31.069 -43.087 25.499 1.00 43.49 C
ATOM 22 N3 A B 997 31.563 -43.388 24.299 1.00 43.86 N
ATOM 23 C4 A B 997 31.510 -44.712 24.066 1.00 44.24 C
ATOM 24 P A B 998 36.953 -46.382 22.546 1.00 48.11 P
ATOM 25 OP1 A B 998 38.215 -46.939 21.954 1.00 48.37 O
ATOM 26 OP2 A B 998 36.182 -47.213 23.525 1.00 48.07 O
ATOM 27 O5' A B 998 37.226 -44.952 23.205 1.00 47.56 O
TER
Atoms:
OP1: (28.405,-35.577,28.379)
OP2: (28.817,-37.910,27.530)
C3': (31.425,-34.498,24.852)
C1': (33.399,-35.709,24.872)
C5': (31.025,-34.789,27.329)
O4': (32.973,-35.511,26.193)
C8: (32.441,-38.042,25.313)
O2': (33.375,-33.499,23.951)
C6: (33.453,-40.057,22.697)
C5: (33.121,-39.141,23.657)
C4: (33.609,-37.865,23.461)
P: (29.340,-36.622,28.077)
C4': (31.993,-34.477,26.239)
C2': (32.643,-34.712,24.007)
C2: (34.575,-38.415,21.613)
N1: (34.193,-39.675,21.673)
N3: (34.362,-37.431,22.451)
N6: (33.071,-41.313,22.759)
N7: (32.403,-39.266,24.833)
N9: (33.131,-37.125,24.525)
O5': (30.483,-36.074,27.142)
O3': (30.751,-33.321,24.539)
OP2: (28.817,-37.910,27.530)
C3': (31.425,-34.498,24.852)
C1': (33.399,-35.709,24.872)
C5': (31.025,-34.789,27.329)
O4': (32.973,-35.511,26.193)
C8: (32.441,-38.042,25.313)
O2': (33.375,-33.499,23.951)
C6: (33.453,-40.057,22.697)
C5: (33.121,-39.141,23.657)
C4: (33.609,-37.865,23.461)
P: (29.340,-36.622,28.077)
C4': (31.993,-34.477,26.239)
C2': (32.643,-34.712,24.007)
C2: (34.575,-38.415,21.613)
N1: (34.193,-39.675,21.673)
N3: (34.362,-37.431,22.451)
N6: (33.071,-41.313,22.759)
N7: (32.403,-39.266,24.833)
N9: (33.131,-37.125,24.525)
O5': (30.483,-36.074,27.142)
O3': (30.751,-33.321,24.539)
OP1: (33.936,-50.766,19.754)
OP2: (32.508,-50.580,21.906)
C3': (34.567,-45.962,21.526)
C1': (32.545,-44.795,21.758)
C5': (33.632,-47.594,19.796)
O4': (32.419,-45.700,20.665)
C8: (31.686,-46.727,23.156)
O2': (34.506,-43.557,21.173)
C6: (30.576,-45.239,26.186)
C5: (31.063,-45.685,24.934)
C4: (31.510,-44.712,24.066)
P: (32.964,-49.985,20.609)
C4': (33.734,-46.185,20.278)
C2': (34.045,-44.608,22.007)
C2: (31.069,-43.087,25.499)
N1: (30.567,-43.902,26.438)
N3: (31.563,-43.388,24.299)
N6: (30.090,-46.057,27.115)
N7: (31.183,-46.946,24.340)
N9: (31.898,-45.394,22.937)
O5': (33.501,-48.498,20.867)
O3': (35.968,-46.021,21.310)
OP2: (32.508,-50.580,21.906)
C3': (34.567,-45.962,21.526)
C1': (32.545,-44.795,21.758)
C5': (33.632,-47.594,19.796)
O4': (32.419,-45.700,20.665)
C8: (31.686,-46.727,23.156)
O2': (34.506,-43.557,21.173)
C6: (30.576,-45.239,26.186)
C5: (31.063,-45.685,24.934)
C4: (31.510,-44.712,24.066)
P: (32.964,-49.985,20.609)
C4': (33.734,-46.185,20.278)
C2': (34.045,-44.608,22.007)
C2: (31.069,-43.087,25.499)
N1: (30.567,-43.902,26.438)
N3: (31.563,-43.388,24.299)
N6: (30.090,-46.057,27.115)
N7: (31.183,-46.946,24.340)
N9: (31.898,-45.394,22.937)
O5': (33.501,-48.498,20.867)
O3': (35.968,-46.021,21.310)
Image (generated by PyMOL):