Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1973:A1778
Extra
PDB:
ATOM 1 O3' G A1972 -14.906 112.250 139.349 1.00 2.95 O
ATOM 2 P A A1973 -14.030 112.653 140.616 1.00 3.08 P
ATOM 3 OP1 A A1973 -14.166 114.128 140.786 1.00 3.08 O
ATOM 4 OP2 A A1973 -12.674 112.086 140.405 1.00 3.08 O
ATOM 5 O5' A A1973 -14.756 111.879 141.811 1.00 3.08 O
ATOM 6 C5' A A1973 -14.486 110.511 142.070 1.00 3.08 C
ATOM 7 C4' A A1973 -15.143 110.063 143.354 1.00 3.08 C
ATOM 8 O4' A A1973 -14.377 110.536 144.495 1.00 3.08 O
ATOM 9 C3' A A1973 -16.557 110.583 143.594 1.00 3.08 C
ATOM 10 O3' A A1973 -17.537 109.741 143.039 1.00 3.08 O
ATOM 11 C2' A A1973 -16.643 110.638 145.107 1.00 3.08 C
ATOM 12 O2' A A1973 -16.891 109.350 145.641 1.00 3.08 O
ATOM 13 C1' A A1973 -15.237 111.047 145.480 1.00 3.08 C
ATOM 14 N9 A A1973 -15.095 112.497 145.483 1.00 3.00 N
ATOM 15 C8 A A1973 -15.901 113.422 144.895 1.00 3.00 C
ATOM 16 N7 A A1973 -15.475 114.645 145.088 1.00 3.00 N
ATOM 17 C5 A A1973 -14.313 114.498 145.825 1.00 3.00 C
ATOM 18 C6 A A1973 -13.383 115.397 146.337 1.00 3.00 C
ATOM 19 N6 A A1973 -13.407 116.724 146.218 1.00 3.00 N
ATOM 20 N1 A A1973 -12.373 114.875 147.017 1.00 3.00 N
ATOM 21 C2 A A1973 -12.305 113.563 147.173 1.00 3.00 C
ATOM 22 N3 A A1973 -13.099 112.611 146.736 1.00 3.00 N
ATOM 23 C4 A A1973 -14.087 113.172 146.070 1.00 3.00 C
ATOM 24 P U A1974 -18.185 110.045 141.612 1.00 0.01 P
ATOM 25 OP1 U A1974 -18.033 108.816 140.811 1.00 0.01 O
ATOM 26 OP2 U A1974 -17.589 111.324 141.108 1.00 0.01 O
ATOM 27 O5' U A1974 -19.712 110.259 141.959 1.00 0.01 O
TER
ATOM 1 O3' A B1777 -18.547 116.667 144.201 1.00 0.01 O
ATOM 2 P A B1778 -19.359 115.377 143.734 1.00 2.73 P
ATOM 3 OP1 A B1778 -19.903 114.755 144.936 1.00 2.73 O
ATOM 4 OP2 A B1778 -18.472 114.587 142.870 1.00 2.73 O
ATOM 5 O5' A B1778 -20.540 115.983 142.886 1.00 2.73 O
ATOM 6 C5' A B1778 -20.298 116.485 141.597 1.00 2.73 C
ATOM 7 C4' A B1778 -21.573 116.811 140.896 1.00 2.73 C
ATOM 8 O4' A B1778 -22.291 117.800 141.650 1.00 2.73 O
ATOM 9 C3' A B1778 -21.424 117.431 139.526 1.00 2.73 C
ATOM 10 O3' A B1778 -21.214 116.471 138.536 1.00 2.73 O
ATOM 11 C2' A B1778 -22.721 118.202 139.350 1.00 2.73 C
ATOM 12 O2' A B1778 -23.779 117.332 138.941 1.00 2.73 O
ATOM 13 C1' A B1778 -22.984 118.667 140.778 1.00 2.73 C
ATOM 14 N9 A B1778 -22.490 120.017 141.019 1.00 2.45 N
ATOM 15 C8 A B1778 -21.201 120.419 141.223 1.00 2.45 C
ATOM 16 N7 A B1778 -21.102 121.705 141.451 1.00 2.45 N
ATOM 17 C5 A B1778 -22.408 122.143 141.412 1.00 2.45 C
ATOM 18 C6 A B1778 -22.971 123.390 141.572 1.00 2.45 C
ATOM 19 N6 A B1778 -22.273 124.479 141.821 1.00 2.45 N
ATOM 20 N1 A B1778 -24.296 123.474 141.465 1.00 2.45 N
ATOM 21 C2 A B1778 -24.996 122.364 141.210 1.00 2.45 C
ATOM 22 N3 A B1778 -24.583 121.116 141.025 1.00 2.45 N
ATOM 23 C4 A B1778 -23.268 121.101 141.153 1.00 2.45 C
ATOM 24 P A B1779 -20.778 116.926 137.089 1.00 0.01 P
ATOM 25 OP1 A B1779 -19.960 115.832 136.529 1.00 0.01 O
ATOM 26 OP2 A B1779 -20.183 118.258 137.213 1.00 0.01 O
ATOM 27 O5' A B1779 -22.171 117.018 136.341 1.00 0.01 O
TER
ATOM 2 P A A1973 -14.030 112.653 140.616 1.00 3.08 P
ATOM 3 OP1 A A1973 -14.166 114.128 140.786 1.00 3.08 O
ATOM 4 OP2 A A1973 -12.674 112.086 140.405 1.00 3.08 O
ATOM 5 O5' A A1973 -14.756 111.879 141.811 1.00 3.08 O
ATOM 6 C5' A A1973 -14.486 110.511 142.070 1.00 3.08 C
ATOM 7 C4' A A1973 -15.143 110.063 143.354 1.00 3.08 C
ATOM 8 O4' A A1973 -14.377 110.536 144.495 1.00 3.08 O
ATOM 9 C3' A A1973 -16.557 110.583 143.594 1.00 3.08 C
ATOM 10 O3' A A1973 -17.537 109.741 143.039 1.00 3.08 O
ATOM 11 C2' A A1973 -16.643 110.638 145.107 1.00 3.08 C
ATOM 12 O2' A A1973 -16.891 109.350 145.641 1.00 3.08 O
ATOM 13 C1' A A1973 -15.237 111.047 145.480 1.00 3.08 C
ATOM 14 N9 A A1973 -15.095 112.497 145.483 1.00 3.00 N
ATOM 15 C8 A A1973 -15.901 113.422 144.895 1.00 3.00 C
ATOM 16 N7 A A1973 -15.475 114.645 145.088 1.00 3.00 N
ATOM 17 C5 A A1973 -14.313 114.498 145.825 1.00 3.00 C
ATOM 18 C6 A A1973 -13.383 115.397 146.337 1.00 3.00 C
ATOM 19 N6 A A1973 -13.407 116.724 146.218 1.00 3.00 N
ATOM 20 N1 A A1973 -12.373 114.875 147.017 1.00 3.00 N
ATOM 21 C2 A A1973 -12.305 113.563 147.173 1.00 3.00 C
ATOM 22 N3 A A1973 -13.099 112.611 146.736 1.00 3.00 N
ATOM 23 C4 A A1973 -14.087 113.172 146.070 1.00 3.00 C
ATOM 24 P U A1974 -18.185 110.045 141.612 1.00 0.01 P
ATOM 25 OP1 U A1974 -18.033 108.816 140.811 1.00 0.01 O
ATOM 26 OP2 U A1974 -17.589 111.324 141.108 1.00 0.01 O
ATOM 27 O5' U A1974 -19.712 110.259 141.959 1.00 0.01 O
TER
ATOM 1 O3' A B1777 -18.547 116.667 144.201 1.00 0.01 O
ATOM 2 P A B1778 -19.359 115.377 143.734 1.00 2.73 P
ATOM 3 OP1 A B1778 -19.903 114.755 144.936 1.00 2.73 O
ATOM 4 OP2 A B1778 -18.472 114.587 142.870 1.00 2.73 O
ATOM 5 O5' A B1778 -20.540 115.983 142.886 1.00 2.73 O
ATOM 6 C5' A B1778 -20.298 116.485 141.597 1.00 2.73 C
ATOM 7 C4' A B1778 -21.573 116.811 140.896 1.00 2.73 C
ATOM 8 O4' A B1778 -22.291 117.800 141.650 1.00 2.73 O
ATOM 9 C3' A B1778 -21.424 117.431 139.526 1.00 2.73 C
ATOM 10 O3' A B1778 -21.214 116.471 138.536 1.00 2.73 O
ATOM 11 C2' A B1778 -22.721 118.202 139.350 1.00 2.73 C
ATOM 12 O2' A B1778 -23.779 117.332 138.941 1.00 2.73 O
ATOM 13 C1' A B1778 -22.984 118.667 140.778 1.00 2.73 C
ATOM 14 N9 A B1778 -22.490 120.017 141.019 1.00 2.45 N
ATOM 15 C8 A B1778 -21.201 120.419 141.223 1.00 2.45 C
ATOM 16 N7 A B1778 -21.102 121.705 141.451 1.00 2.45 N
ATOM 17 C5 A B1778 -22.408 122.143 141.412 1.00 2.45 C
ATOM 18 C6 A B1778 -22.971 123.390 141.572 1.00 2.45 C
ATOM 19 N6 A B1778 -22.273 124.479 141.821 1.00 2.45 N
ATOM 20 N1 A B1778 -24.296 123.474 141.465 1.00 2.45 N
ATOM 21 C2 A B1778 -24.996 122.364 141.210 1.00 2.45 C
ATOM 22 N3 A B1778 -24.583 121.116 141.025 1.00 2.45 N
ATOM 23 C4 A B1778 -23.268 121.101 141.153 1.00 2.45 C
ATOM 24 P A B1779 -20.778 116.926 137.089 1.00 0.01 P
ATOM 25 OP1 A B1779 -19.960 115.832 136.529 1.00 0.01 O
ATOM 26 OP2 A B1779 -20.183 118.258 137.213 1.00 0.01 O
ATOM 27 O5' A B1779 -22.171 117.018 136.341 1.00 0.01 O
TER
Atoms:
OP1: (-14.166,114.128,140.786)
OP2: (-12.674,112.086,140.405)
C3': (-16.557,110.583,143.594)
C1': (-15.237,111.047,145.480)
C5': (-14.486,110.511,142.070)
O4': (-14.377,110.536,144.495)
C8: (-15.901,113.422,144.895)
O2': (-16.891,109.350,145.641)
C6: (-13.383,115.397,146.337)
C5: (-14.313,114.498,145.825)
C4: (-14.087,113.172,146.070)
P: (-14.030,112.653,140.616)
C4': (-15.143,110.063,143.354)
C2': (-16.643,110.638,145.107)
C2: (-12.305,113.563,147.173)
N1: (-12.373,114.875,147.017)
N3: (-13.099,112.611,146.736)
N6: (-13.407,116.724,146.218)
N7: (-15.475,114.645,145.088)
N9: (-15.095,112.497,145.483)
O5': (-14.756,111.879,141.811)
O3': (-17.537,109.741,143.039)
OP2: (-12.674,112.086,140.405)
C3': (-16.557,110.583,143.594)
C1': (-15.237,111.047,145.480)
C5': (-14.486,110.511,142.070)
O4': (-14.377,110.536,144.495)
C8: (-15.901,113.422,144.895)
O2': (-16.891,109.350,145.641)
C6: (-13.383,115.397,146.337)
C5: (-14.313,114.498,145.825)
C4: (-14.087,113.172,146.070)
P: (-14.030,112.653,140.616)
C4': (-15.143,110.063,143.354)
C2': (-16.643,110.638,145.107)
C2: (-12.305,113.563,147.173)
N1: (-12.373,114.875,147.017)
N3: (-13.099,112.611,146.736)
N6: (-13.407,116.724,146.218)
N7: (-15.475,114.645,145.088)
N9: (-15.095,112.497,145.483)
O5': (-14.756,111.879,141.811)
O3': (-17.537,109.741,143.039)
OP1: (-19.903,114.755,144.936)
OP2: (-18.472,114.587,142.870)
C3': (-21.424,117.431,139.526)
C1': (-22.984,118.667,140.778)
C5': (-20.298,116.485,141.597)
O4': (-22.291,117.800,141.650)
C8: (-21.201,120.419,141.223)
O2': (-23.779,117.332,138.941)
C6: (-22.971,123.390,141.572)
C5: (-22.408,122.143,141.412)
C4: (-23.268,121.101,141.153)
P: (-19.359,115.377,143.734)
C4': (-21.573,116.811,140.896)
C2': (-22.721,118.202,139.350)
C2: (-24.996,122.364,141.210)
N1: (-24.296,123.474,141.465)
N3: (-24.583,121.116,141.025)
N6: (-22.273,124.479,141.821)
N7: (-21.102,121.705,141.451)
N9: (-22.490,120.017,141.019)
O5': (-20.540,115.983,142.886)
O3': (-21.214,116.471,138.536)
OP2: (-18.472,114.587,142.870)
C3': (-21.424,117.431,139.526)
C1': (-22.984,118.667,140.778)
C5': (-20.298,116.485,141.597)
O4': (-22.291,117.800,141.650)
C8: (-21.201,120.419,141.223)
O2': (-23.779,117.332,138.941)
C6: (-22.971,123.390,141.572)
C5: (-22.408,122.143,141.412)
C4: (-23.268,121.101,141.153)
P: (-19.359,115.377,143.734)
C4': (-21.573,116.811,140.896)
C2': (-22.721,118.202,139.350)
C2: (-24.996,122.364,141.210)
N1: (-24.296,123.474,141.465)
N3: (-24.583,121.116,141.025)
N6: (-22.273,124.479,141.821)
N7: (-21.102,121.705,141.451)
N9: (-22.490,120.017,141.019)
O5': (-20.540,115.983,142.886)
O3': (-21.214,116.471,138.536)
Image (generated by PyMOL):