Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A962:A978
Extra
PDB:
ATOM 1 O3' C A 961 -111.765 -83.990 14.487 1.00 0.01 O
ATOM 2 P G A 962 -110.274 -84.544 14.658 1.00 0.01 P
ATOM 3 OP1 G A 962 -110.375 -85.863 15.321 1.00 0.01 O
ATOM 4 OP2 G A 962 -109.491 -83.479 15.294 1.00 0.01 O
ATOM 5 O5' G A 962 -109.789 -84.740 13.172 1.00 0.01 O
ATOM 6 C5' G A 962 -109.944 -85.968 12.507 1.00 0.01 C
ATOM 7 C4' G A 962 -109.082 -86.013 11.277 1.00 0.01 C
ATOM 8 O4' G A 962 -109.228 -84.797 10.525 1.00 0.01 O
ATOM 9 C3' G A 962 -107.603 -86.084 11.520 1.00 0.01 C
ATOM 10 O3' G A 962 -107.193 -87.369 11.800 1.00 0.01 O
ATOM 11 C2' G A 962 -107.037 -85.559 10.236 1.00 0.01 C
ATOM 12 O2' G A 962 -107.183 -86.524 9.211 1.00 0.01 O
ATOM 13 C1' G A 962 -107.993 -84.441 9.951 1.00 0.01 C
ATOM 14 N9 G A 962 -107.565 -83.170 10.531 1.00 0.01 N
ATOM 15 C8 G A 962 -108.119 -82.562 11.630 1.00 0.01 C
ATOM 16 N7 G A 962 -107.588 -81.419 11.886 1.00 0.01 N
ATOM 17 C5 G A 962 -106.631 -81.245 10.886 1.00 0.01 C
ATOM 18 C6 G A 962 -105.718 -80.163 10.626 1.00 0.01 C
ATOM 19 O6 G A 962 -105.559 -79.099 11.225 1.00 0.01 O
ATOM 20 N1 G A 962 -104.927 -80.399 9.511 1.00 0.01 N
ATOM 21 C2 G A 962 -105.015 -81.530 8.736 1.00 0.01 C
ATOM 22 N2 G A 962 -104.161 -81.550 7.707 1.00 0.01 N
ATOM 23 N3 G A 962 -105.866 -82.543 8.945 1.00 0.01 N
ATOM 24 C4 G A 962 -106.629 -82.331 10.030 1.00 0.01 C
ATOM 25 P U A 963 -106.119 -87.609 12.914 1.00 0.01 P
ATOM 26 OP1 U A 963 -106.202 -89.052 13.267 1.00 0.01 O
ATOM 27 OP2 U A 963 -106.341 -86.603 13.958 1.00 0.01 O
ATOM 28 O5' U A 963 -104.772 -87.295 12.144 1.00 0.01 O
TER
ATOM 1 O3' A B 977 -101.753 -83.489 6.263 1.00 0.01 O
ATOM 2 P C B 978 -102.751 -84.543 5.691 1.00 0.01 P
ATOM 3 OP1 C B 978 -104.048 -84.306 6.354 1.00 0.01 O
ATOM 4 OP2 C B 978 -102.111 -85.842 5.823 1.00 0.01 O
ATOM 5 O5' C B 978 -102.833 -84.151 4.165 1.00 0.01 O
ATOM 6 C5' C B 978 -104.014 -83.614 3.605 1.00 0.01 C
ATOM 7 C4' C B 978 -104.268 -84.193 2.246 1.00 0.01 C
ATOM 8 O4' C B 978 -103.054 -84.145 1.475 1.00 0.01 O
ATOM 9 C3' C B 978 -104.658 -85.653 2.224 1.00 0.01 C
ATOM 10 O3' C B 978 -106.017 -85.847 2.469 1.00 0.01 O
ATOM 11 C2' C B 978 -104.236 -86.093 0.855 1.00 0.01 C
ATOM 12 O2' C B 978 -105.192 -85.706 -0.103 1.00 0.01 O
ATOM 13 C1' C B 978 -102.975 -85.266 0.643 1.00 0.01 C
ATOM 14 N1 C B 978 -101.763 -86.009 0.979 1.00 0.01 N
ATOM 15 C2 C B 978 -101.439 -87.038 0.155 1.00 0.01 C
ATOM 16 O2 C B 978 -102.184 -87.255 -0.771 1.00 0.01 O
ATOM 17 N3 C B 978 -100.375 -87.776 0.349 1.00 0.01 N
ATOM 18 C4 C B 978 -99.611 -87.500 1.371 1.00 0.01 C
ATOM 19 N4 C B 978 -98.543 -88.276 1.531 1.00 0.01 N
ATOM 20 C5 C B 978 -99.884 -86.432 2.262 1.00 0.01 C
ATOM 21 C6 C B 978 -100.978 -85.710 2.031 1.00 0.01 C
ATOM 22 P C B 979 -106.492 -87.054 3.387 1.00 0.01 P
ATOM 23 OP1 C B 979 -107.918 -86.851 3.669 1.00 0.01 O
ATOM 24 OP2 C B 979 -105.558 -87.168 4.507 1.00 0.01 O
ATOM 25 O5' C B 979 -106.306 -88.276 2.421 1.00 0.01 O
TER
ATOM 2 P G A 962 -110.274 -84.544 14.658 1.00 0.01 P
ATOM 3 OP1 G A 962 -110.375 -85.863 15.321 1.00 0.01 O
ATOM 4 OP2 G A 962 -109.491 -83.479 15.294 1.00 0.01 O
ATOM 5 O5' G A 962 -109.789 -84.740 13.172 1.00 0.01 O
ATOM 6 C5' G A 962 -109.944 -85.968 12.507 1.00 0.01 C
ATOM 7 C4' G A 962 -109.082 -86.013 11.277 1.00 0.01 C
ATOM 8 O4' G A 962 -109.228 -84.797 10.525 1.00 0.01 O
ATOM 9 C3' G A 962 -107.603 -86.084 11.520 1.00 0.01 C
ATOM 10 O3' G A 962 -107.193 -87.369 11.800 1.00 0.01 O
ATOM 11 C2' G A 962 -107.037 -85.559 10.236 1.00 0.01 C
ATOM 12 O2' G A 962 -107.183 -86.524 9.211 1.00 0.01 O
ATOM 13 C1' G A 962 -107.993 -84.441 9.951 1.00 0.01 C
ATOM 14 N9 G A 962 -107.565 -83.170 10.531 1.00 0.01 N
ATOM 15 C8 G A 962 -108.119 -82.562 11.630 1.00 0.01 C
ATOM 16 N7 G A 962 -107.588 -81.419 11.886 1.00 0.01 N
ATOM 17 C5 G A 962 -106.631 -81.245 10.886 1.00 0.01 C
ATOM 18 C6 G A 962 -105.718 -80.163 10.626 1.00 0.01 C
ATOM 19 O6 G A 962 -105.559 -79.099 11.225 1.00 0.01 O
ATOM 20 N1 G A 962 -104.927 -80.399 9.511 1.00 0.01 N
ATOM 21 C2 G A 962 -105.015 -81.530 8.736 1.00 0.01 C
ATOM 22 N2 G A 962 -104.161 -81.550 7.707 1.00 0.01 N
ATOM 23 N3 G A 962 -105.866 -82.543 8.945 1.00 0.01 N
ATOM 24 C4 G A 962 -106.629 -82.331 10.030 1.00 0.01 C
ATOM 25 P U A 963 -106.119 -87.609 12.914 1.00 0.01 P
ATOM 26 OP1 U A 963 -106.202 -89.052 13.267 1.00 0.01 O
ATOM 27 OP2 U A 963 -106.341 -86.603 13.958 1.00 0.01 O
ATOM 28 O5' U A 963 -104.772 -87.295 12.144 1.00 0.01 O
TER
ATOM 1 O3' A B 977 -101.753 -83.489 6.263 1.00 0.01 O
ATOM 2 P C B 978 -102.751 -84.543 5.691 1.00 0.01 P
ATOM 3 OP1 C B 978 -104.048 -84.306 6.354 1.00 0.01 O
ATOM 4 OP2 C B 978 -102.111 -85.842 5.823 1.00 0.01 O
ATOM 5 O5' C B 978 -102.833 -84.151 4.165 1.00 0.01 O
ATOM 6 C5' C B 978 -104.014 -83.614 3.605 1.00 0.01 C
ATOM 7 C4' C B 978 -104.268 -84.193 2.246 1.00 0.01 C
ATOM 8 O4' C B 978 -103.054 -84.145 1.475 1.00 0.01 O
ATOM 9 C3' C B 978 -104.658 -85.653 2.224 1.00 0.01 C
ATOM 10 O3' C B 978 -106.017 -85.847 2.469 1.00 0.01 O
ATOM 11 C2' C B 978 -104.236 -86.093 0.855 1.00 0.01 C
ATOM 12 O2' C B 978 -105.192 -85.706 -0.103 1.00 0.01 O
ATOM 13 C1' C B 978 -102.975 -85.266 0.643 1.00 0.01 C
ATOM 14 N1 C B 978 -101.763 -86.009 0.979 1.00 0.01 N
ATOM 15 C2 C B 978 -101.439 -87.038 0.155 1.00 0.01 C
ATOM 16 O2 C B 978 -102.184 -87.255 -0.771 1.00 0.01 O
ATOM 17 N3 C B 978 -100.375 -87.776 0.349 1.00 0.01 N
ATOM 18 C4 C B 978 -99.611 -87.500 1.371 1.00 0.01 C
ATOM 19 N4 C B 978 -98.543 -88.276 1.531 1.00 0.01 N
ATOM 20 C5 C B 978 -99.884 -86.432 2.262 1.00 0.01 C
ATOM 21 C6 C B 978 -100.978 -85.710 2.031 1.00 0.01 C
ATOM 22 P C B 979 -106.492 -87.054 3.387 1.00 0.01 P
ATOM 23 OP1 C B 979 -107.918 -86.851 3.669 1.00 0.01 O
ATOM 24 OP2 C B 979 -105.558 -87.168 4.507 1.00 0.01 O
ATOM 25 O5' C B 979 -106.306 -88.276 2.421 1.00 0.01 O
TER
Atoms:
OP1: (-110.375,-85.863,15.321)
OP2: (-109.491,-83.479,15.294)
C3': (-107.603,-86.084,11.520)
C1': (-107.993,-84.441,9.951)
C5': (-109.944,-85.968,12.507)
O6: (-105.559,-79.099,11.225)
O4': (-109.228,-84.797,10.525)
C8: (-108.119,-82.562,11.630)
C2: (-105.015,-81.530,8.736)
C6: (-105.718,-80.163,10.626)
C5: (-106.631,-81.245,10.886)
C4: (-106.629,-82.331,10.030)
P: (-110.274,-84.544,14.658)
C4': (-109.082,-86.013,11.277)
C2': (-107.037,-85.559,10.236)
O2': (-107.183,-86.524,9.211)
N1: (-104.927,-80.399,9.511)
N2: (-104.161,-81.550,7.707)
N3: (-105.866,-82.543,8.945)
N7: (-107.588,-81.419,11.886)
N9: (-107.565,-83.170,10.531)
O5': (-109.789,-84.740,13.172)
O3': (-107.193,-87.369,11.800)
OP2: (-109.491,-83.479,15.294)
C3': (-107.603,-86.084,11.520)
C1': (-107.993,-84.441,9.951)
C5': (-109.944,-85.968,12.507)
O6: (-105.559,-79.099,11.225)
O4': (-109.228,-84.797,10.525)
C8: (-108.119,-82.562,11.630)
C2: (-105.015,-81.530,8.736)
C6: (-105.718,-80.163,10.626)
C5: (-106.631,-81.245,10.886)
C4: (-106.629,-82.331,10.030)
P: (-110.274,-84.544,14.658)
C4': (-109.082,-86.013,11.277)
C2': (-107.037,-85.559,10.236)
O2': (-107.183,-86.524,9.211)
N1: (-104.927,-80.399,9.511)
N2: (-104.161,-81.550,7.707)
N3: (-105.866,-82.543,8.945)
N7: (-107.588,-81.419,11.886)
N9: (-107.565,-83.170,10.531)
O5': (-109.789,-84.740,13.172)
O3': (-107.193,-87.369,11.800)
C2: (-101.439,-87.038,0.155)
OP1: (-104.048,-84.306,6.354)
OP2: (-102.111,-85.842,5.823)
C4: (-99.611,-87.500,1.371)
O5': (-102.833,-84.151,4.165)
C3': (-104.658,-85.653,2.224)
C1': (-102.975,-85.266,0.643)
O4': (-103.054,-84.145,1.475)
C5': (-104.014,-83.614,3.605)
P: (-102.751,-84.543,5.691)
O2: (-102.184,-87.255,-0.771)
C4': (-104.268,-84.193,2.246)
C2': (-104.236,-86.093,0.855)
O2': (-105.192,-85.706,-0.103)
N1: (-101.763,-86.009,0.979)
N3: (-100.375,-87.776,0.349)
N4: (-98.543,-88.276,1.531)
C6: (-100.978,-85.710,2.031)
C5: (-99.884,-86.432,2.262)
O3': (-106.017,-85.847,2.469)
OP1: (-104.048,-84.306,6.354)
OP2: (-102.111,-85.842,5.823)
C4: (-99.611,-87.500,1.371)
O5': (-102.833,-84.151,4.165)
C3': (-104.658,-85.653,2.224)
C1': (-102.975,-85.266,0.643)
O4': (-103.054,-84.145,1.475)
C5': (-104.014,-83.614,3.605)
P: (-102.751,-84.543,5.691)
O2: (-102.184,-87.255,-0.771)
C4': (-104.268,-84.193,2.246)
C2': (-104.236,-86.093,0.855)
O2': (-105.192,-85.706,-0.103)
N1: (-101.763,-86.009,0.979)
N3: (-100.375,-87.776,0.349)
N4: (-98.543,-88.276,1.531)
C6: (-100.978,-85.710,2.031)
C5: (-99.884,-86.432,2.262)
O3': (-106.017,-85.847,2.469)
Image (generated by PyMOL):