Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A308:A122
Extra
PDB:
ATOM 1 O3' A A 307 -11.162 40.245 99.899 1.00 16.46 O
ATOM 2 P G A 308 -10.555 41.085 101.115 1.00 14.11 P
ATOM 3 OP1 G A 308 -9.717 40.171 101.926 1.00 14.11 O
ATOM 4 OP2 G A 308 -11.690 41.762 101.767 1.00 14.11 O
ATOM 5 O5' G A 308 -9.626 42.154 100.379 1.00 14.11 O
ATOM 6 C5' G A 308 -8.362 41.775 99.848 1.00 14.11 C
ATOM 7 C4' G A 308 -7.487 42.970 99.570 1.00 14.11 C
ATOM 8 O4' G A 308 -8.121 43.821 98.576 1.00 14.11 O
ATOM 9 C3' G A 308 -7.248 43.903 100.739 1.00 14.11 C
ATOM 10 O3' G A 308 -6.239 43.460 101.609 1.00 14.11 O
ATOM 11 C2' G A 308 -6.933 45.220 100.053 1.00 14.11 C
ATOM 12 O2' G A 308 -5.621 45.213 99.514 1.00 14.11 O
ATOM 13 C1' G A 308 -7.923 45.179 98.907 1.00 14.11 C
ATOM 14 N9 G A 308 -9.220 45.732 99.296 1.00 13.84 N
ATOM 15 C8 G A 308 -10.334 44.964 99.506 1.00 13.84 C
ATOM 16 N7 G A 308 -11.377 45.666 99.826 1.00 13.84 N
ATOM 17 C5 G A 308 -10.904 46.971 99.829 1.00 13.84 C
ATOM 18 C6 G A 308 -11.594 48.152 100.102 1.00 13.84 C
ATOM 19 O6 G A 308 -12.782 48.229 100.406 1.00 13.84 O
ATOM 20 N1 G A 308 -10.765 49.264 99.992 1.00 13.84 N
ATOM 21 C2 G A 308 -9.436 49.229 99.656 1.00 13.84 C
ATOM 22 N2 G A 308 -8.792 50.400 99.594 1.00 13.84 N
ATOM 23 N3 G A 308 -8.774 48.121 99.393 1.00 13.84 N
ATOM 24 C4 G A 308 -9.572 47.039 99.504 1.00 13.84 C
ATOM 25 P C A 309 -6.432 43.681 103.176 1.00 17.08 P
ATOM 26 OP1 C A 309 -5.423 42.836 103.876 1.00 17.08 O
ATOM 27 OP2 C A 309 -7.875 43.459 103.455 1.00 17.08 O
ATOM 28 O5' C A 309 -6.072 45.222 103.349 1.00 17.08 O
TER
ATOM 1 O3' U B 121 -6.046 51.978 99.995 1.00 9.31 O
ATOM 2 P C B 122 -5.042 51.026 99.175 1.00 11.86 P
ATOM 3 OP1 C B 122 -5.819 49.801 98.782 1.00 11.86 O
ATOM 4 OP2 C B 122 -3.827 50.863 99.992 1.00 11.86 O
ATOM 5 O5' C B 122 -4.708 51.891 97.891 1.00 11.86 O
ATOM 6 C5' C B 122 -5.460 51.716 96.710 1.00 11.86 C
ATOM 7 C4' C B 122 -5.105 52.734 95.679 1.00 11.86 C
ATOM 8 O4' C B 122 -5.053 54.049 96.280 1.00 11.86 O
ATOM 9 C3' C B 122 -3.740 52.599 95.047 1.00 11.86 C
ATOM 10 O3' C B 122 -3.660 51.541 94.102 1.00 11.86 O
ATOM 11 C2' C B 122 -3.564 53.979 94.448 1.00 11.86 C
ATOM 12 O2' C B 122 -4.393 54.131 93.309 1.00 11.86 O
ATOM 13 C1' C B 122 -4.139 54.842 95.562 1.00 11.86 C
ATOM 14 N1 C B 122 -3.111 55.306 96.475 1.00 12.10 N
ATOM 15 C2 C B 122 -2.328 56.364 96.027 1.00 12.10 C
ATOM 16 O2 C B 122 -2.554 56.790 94.894 1.00 12.10 O
ATOM 17 N3 C B 122 -1.368 56.885 96.821 1.00 12.10 N
ATOM 18 C4 C B 122 -1.196 56.351 98.036 1.00 12.10 C
ATOM 19 N4 C B 122 -0.233 56.865 98.808 1.00 12.10 N
ATOM 20 C5 C B 122 -1.995 55.263 98.523 1.00 12.10 C
ATOM 21 C6 C B 122 -2.946 54.768 97.715 1.00 12.10 C
ATOM 22 P U B 123 -2.375 50.564 94.079 1.00 16.58 P
ATOM 23 OP1 U B 123 -2.820 49.286 93.486 1.00 16.58 O
ATOM 24 OP2 U B 123 -1.793 50.555 95.429 1.00 16.58 O
ATOM 25 O5' U B 123 -1.391 51.301 93.093 1.00 16.58 O
TER
ATOM 2 P G A 308 -10.555 41.085 101.115 1.00 14.11 P
ATOM 3 OP1 G A 308 -9.717 40.171 101.926 1.00 14.11 O
ATOM 4 OP2 G A 308 -11.690 41.762 101.767 1.00 14.11 O
ATOM 5 O5' G A 308 -9.626 42.154 100.379 1.00 14.11 O
ATOM 6 C5' G A 308 -8.362 41.775 99.848 1.00 14.11 C
ATOM 7 C4' G A 308 -7.487 42.970 99.570 1.00 14.11 C
ATOM 8 O4' G A 308 -8.121 43.821 98.576 1.00 14.11 O
ATOM 9 C3' G A 308 -7.248 43.903 100.739 1.00 14.11 C
ATOM 10 O3' G A 308 -6.239 43.460 101.609 1.00 14.11 O
ATOM 11 C2' G A 308 -6.933 45.220 100.053 1.00 14.11 C
ATOM 12 O2' G A 308 -5.621 45.213 99.514 1.00 14.11 O
ATOM 13 C1' G A 308 -7.923 45.179 98.907 1.00 14.11 C
ATOM 14 N9 G A 308 -9.220 45.732 99.296 1.00 13.84 N
ATOM 15 C8 G A 308 -10.334 44.964 99.506 1.00 13.84 C
ATOM 16 N7 G A 308 -11.377 45.666 99.826 1.00 13.84 N
ATOM 17 C5 G A 308 -10.904 46.971 99.829 1.00 13.84 C
ATOM 18 C6 G A 308 -11.594 48.152 100.102 1.00 13.84 C
ATOM 19 O6 G A 308 -12.782 48.229 100.406 1.00 13.84 O
ATOM 20 N1 G A 308 -10.765 49.264 99.992 1.00 13.84 N
ATOM 21 C2 G A 308 -9.436 49.229 99.656 1.00 13.84 C
ATOM 22 N2 G A 308 -8.792 50.400 99.594 1.00 13.84 N
ATOM 23 N3 G A 308 -8.774 48.121 99.393 1.00 13.84 N
ATOM 24 C4 G A 308 -9.572 47.039 99.504 1.00 13.84 C
ATOM 25 P C A 309 -6.432 43.681 103.176 1.00 17.08 P
ATOM 26 OP1 C A 309 -5.423 42.836 103.876 1.00 17.08 O
ATOM 27 OP2 C A 309 -7.875 43.459 103.455 1.00 17.08 O
ATOM 28 O5' C A 309 -6.072 45.222 103.349 1.00 17.08 O
TER
ATOM 1 O3' U B 121 -6.046 51.978 99.995 1.00 9.31 O
ATOM 2 P C B 122 -5.042 51.026 99.175 1.00 11.86 P
ATOM 3 OP1 C B 122 -5.819 49.801 98.782 1.00 11.86 O
ATOM 4 OP2 C B 122 -3.827 50.863 99.992 1.00 11.86 O
ATOM 5 O5' C B 122 -4.708 51.891 97.891 1.00 11.86 O
ATOM 6 C5' C B 122 -5.460 51.716 96.710 1.00 11.86 C
ATOM 7 C4' C B 122 -5.105 52.734 95.679 1.00 11.86 C
ATOM 8 O4' C B 122 -5.053 54.049 96.280 1.00 11.86 O
ATOM 9 C3' C B 122 -3.740 52.599 95.047 1.00 11.86 C
ATOM 10 O3' C B 122 -3.660 51.541 94.102 1.00 11.86 O
ATOM 11 C2' C B 122 -3.564 53.979 94.448 1.00 11.86 C
ATOM 12 O2' C B 122 -4.393 54.131 93.309 1.00 11.86 O
ATOM 13 C1' C B 122 -4.139 54.842 95.562 1.00 11.86 C
ATOM 14 N1 C B 122 -3.111 55.306 96.475 1.00 12.10 N
ATOM 15 C2 C B 122 -2.328 56.364 96.027 1.00 12.10 C
ATOM 16 O2 C B 122 -2.554 56.790 94.894 1.00 12.10 O
ATOM 17 N3 C B 122 -1.368 56.885 96.821 1.00 12.10 N
ATOM 18 C4 C B 122 -1.196 56.351 98.036 1.00 12.10 C
ATOM 19 N4 C B 122 -0.233 56.865 98.808 1.00 12.10 N
ATOM 20 C5 C B 122 -1.995 55.263 98.523 1.00 12.10 C
ATOM 21 C6 C B 122 -2.946 54.768 97.715 1.00 12.10 C
ATOM 22 P U B 123 -2.375 50.564 94.079 1.00 16.58 P
ATOM 23 OP1 U B 123 -2.820 49.286 93.486 1.00 16.58 O
ATOM 24 OP2 U B 123 -1.793 50.555 95.429 1.00 16.58 O
ATOM 25 O5' U B 123 -1.391 51.301 93.093 1.00 16.58 O
TER
Atoms:
OP1: (-9.717,40.171,101.926)
OP2: (-11.690,41.762,101.767)
C3': (-7.248,43.903,100.739)
C1': (-7.923,45.179,98.907)
C5': (-8.362,41.775,99.848)
O6: (-12.782,48.229,100.406)
O4': (-8.121,43.821,98.576)
C8: (-10.334,44.964,99.506)
C2: (-9.436,49.229,99.656)
C6: (-11.594,48.152,100.102)
C5: (-10.904,46.971,99.829)
C4: (-9.572,47.039,99.504)
P: (-10.555,41.085,101.115)
C4': (-7.487,42.970,99.570)
C2': (-6.933,45.220,100.053)
O2': (-5.621,45.213,99.514)
N1: (-10.765,49.264,99.992)
N2: (-8.792,50.400,99.594)
N3: (-8.774,48.121,99.393)
N7: (-11.377,45.666,99.826)
N9: (-9.220,45.732,99.296)
O5': (-9.626,42.154,100.379)
O3': (-6.239,43.460,101.609)
OP2: (-11.690,41.762,101.767)
C3': (-7.248,43.903,100.739)
C1': (-7.923,45.179,98.907)
C5': (-8.362,41.775,99.848)
O6: (-12.782,48.229,100.406)
O4': (-8.121,43.821,98.576)
C8: (-10.334,44.964,99.506)
C2: (-9.436,49.229,99.656)
C6: (-11.594,48.152,100.102)
C5: (-10.904,46.971,99.829)
C4: (-9.572,47.039,99.504)
P: (-10.555,41.085,101.115)
C4': (-7.487,42.970,99.570)
C2': (-6.933,45.220,100.053)
O2': (-5.621,45.213,99.514)
N1: (-10.765,49.264,99.992)
N2: (-8.792,50.400,99.594)
N3: (-8.774,48.121,99.393)
N7: (-11.377,45.666,99.826)
N9: (-9.220,45.732,99.296)
O5': (-9.626,42.154,100.379)
O3': (-6.239,43.460,101.609)
C2: (-2.328,56.364,96.027)
OP1: (-5.819,49.801,98.782)
OP2: (-3.827,50.863,99.992)
C4: (-1.196,56.351,98.036)
O5': (-4.708,51.891,97.891)
C3': (-3.740,52.599,95.047)
C1': (-4.139,54.842,95.562)
O4': (-5.053,54.049,96.280)
C5': (-5.460,51.716,96.710)
P: (-5.042,51.026,99.175)
O2: (-2.554,56.790,94.894)
C4': (-5.105,52.734,95.679)
C2': (-3.564,53.979,94.448)
O2': (-4.393,54.131,93.309)
N1: (-3.111,55.306,96.475)
N3: (-1.368,56.885,96.821)
N4: (-0.233,56.865,98.808)
C6: (-2.946,54.768,97.715)
C5: (-1.995,55.263,98.523)
O3': (-3.660,51.541,94.102)
OP1: (-5.819,49.801,98.782)
OP2: (-3.827,50.863,99.992)
C4: (-1.196,56.351,98.036)
O5': (-4.708,51.891,97.891)
C3': (-3.740,52.599,95.047)
C1': (-4.139,54.842,95.562)
O4': (-5.053,54.049,96.280)
C5': (-5.460,51.716,96.710)
P: (-5.042,51.026,99.175)
O2: (-2.554,56.790,94.894)
C4': (-5.105,52.734,95.679)
C2': (-3.564,53.979,94.448)
O2': (-4.393,54.131,93.309)
N1: (-3.111,55.306,96.475)
N3: (-1.368,56.885,96.821)
N4: (-0.233,56.865,98.808)
C6: (-2.946,54.768,97.715)
C5: (-1.995,55.263,98.523)
O3': (-3.660,51.541,94.102)
Image (generated by PyMOL):