Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0678:0719
Extra
PDB:
ATOM 1 O3' G A 677 52.077 71.266 47.717 1.00 39.90 O
ATOM 2 P G A 678 53.374 71.953 48.362 1.00 39.51 P
ATOM 3 OP1 G A 678 53.046 72.150 49.796 1.00 38.86 O
ATOM 4 OP2 G A 678 53.787 73.115 47.533 1.00 40.38 O
ATOM 5 O5' G A 678 54.506 70.845 48.213 1.00 38.24 O
ATOM 6 C5' G A 678 54.369 69.580 48.856 1.00 38.23 C
ATOM 7 C4' G A 678 55.440 68.637 48.382 1.00 39.40 C
ATOM 8 O4' G A 678 55.238 68.328 46.982 1.00 40.59 O
ATOM 9 C3' G A 678 56.862 69.162 48.412 1.00 40.24 C
ATOM 10 O3' G A 678 57.421 69.119 49.720 1.00 41.40 O
ATOM 11 C2' G A 678 57.562 68.198 47.468 1.00 38.51 C
ATOM 12 O2' G A 678 57.833 66.971 48.108 1.00 37.76 O
ATOM 13 C1' G A 678 56.486 67.992 46.394 1.00 38.69 C
ATOM 14 N9 G A 678 56.695 68.824 45.211 1.00 38.75 N
ATOM 15 C8 G A 678 56.124 70.043 44.928 1.00 38.90 C
ATOM 16 N7 G A 678 56.571 70.572 43.821 1.00 39.13 N
ATOM 17 C5 G A 678 57.483 69.641 43.338 1.00 40.35 C
ATOM 18 C6 G A 678 58.314 69.672 42.182 1.00 41.68 C
ATOM 19 O6 G A 678 58.428 70.564 41.334 1.00 43.59 O
ATOM 20 N1 G A 678 59.079 68.516 42.070 1.00 41.43 N
ATOM 21 C2 G A 678 59.062 67.470 42.956 1.00 41.27 C
ATOM 22 N2 G A 678 59.880 66.442 42.679 1.00 41.18 N
ATOM 23 N3 G A 678 58.304 67.433 44.037 1.00 41.15 N
ATOM 24 C4 G A 678 57.549 68.546 44.168 1.00 39.64 C
ATOM 25 P G A 679 58.553 70.179 50.130 1.00 43.16 P
ATOM 26 OP1 G A 679 58.960 69.908 51.539 1.00 44.47 O
ATOM 27 OP2 G A 679 58.067 71.524 49.760 1.00 42.58 O
ATOM 28 O5' G A 679 59.776 69.800 49.183 1.00 43.52 O
TER
ATOM 1 O3' U B 718 59.216 63.681 43.902 1.00 43.08 O
ATOM 2 P C B 719 60.610 62.977 44.278 1.00 44.23 P
ATOM 3 OP1 C B 719 61.613 63.415 43.282 1.00 47.35 O
ATOM 4 OP2 C B 719 60.372 61.532 44.484 1.00 47.31 O
ATOM 5 O5' C B 719 61.004 63.609 45.684 1.00 46.17 O
ATOM 6 C5' C B 719 61.416 64.986 45.797 1.00 45.22 C
ATOM 7 C4' C B 719 61.816 65.291 47.219 1.00 44.62 C
ATOM 8 O4' C B 719 60.652 65.277 48.085 1.00 44.22 O
ATOM 9 C3' C B 719 62.751 64.274 47.843 1.00 44.49 C
ATOM 10 O3' C B 719 64.089 64.502 47.450 1.00 44.81 O
ATOM 11 C2' C B 719 62.521 64.485 49.331 1.00 45.09 C
ATOM 12 O2' C B 719 63.202 65.612 49.832 1.00 45.02 O
ATOM 13 C1' C B 719 61.017 64.766 49.359 1.00 46.28 C
ATOM 14 N1 C B 719 60.198 63.574 49.647 1.00 48.54 N
ATOM 15 C2 C B 719 59.845 63.301 50.976 1.00 48.91 C
ATOM 16 O2 C B 719 60.249 64.048 51.873 1.00 50.11 O
ATOM 17 N3 C B 719 59.077 62.228 51.248 1.00 48.62 N
ATOM 18 C4 C B 719 58.672 61.432 50.262 1.00 48.75 C
ATOM 19 N4 C B 719 57.924 60.384 50.583 1.00 49.27 N
ATOM 20 C5 C B 719 59.021 61.676 48.902 1.00 50.16 C
ATOM 21 C6 C B 719 59.779 62.746 48.642 1.00 49.24 C
ATOM 22 P U B 720 65.117 63.280 47.417 1.00 46.65 P
ATOM 23 OP1 U B 720 66.437 63.766 46.957 1.00 46.11 O
ATOM 24 OP2 U B 720 64.457 62.168 46.695 1.00 47.72 O
ATOM 25 O5' U B 720 65.266 62.890 48.950 1.00 46.57 O
TER
ATOM 2 P G A 678 53.374 71.953 48.362 1.00 39.51 P
ATOM 3 OP1 G A 678 53.046 72.150 49.796 1.00 38.86 O
ATOM 4 OP2 G A 678 53.787 73.115 47.533 1.00 40.38 O
ATOM 5 O5' G A 678 54.506 70.845 48.213 1.00 38.24 O
ATOM 6 C5' G A 678 54.369 69.580 48.856 1.00 38.23 C
ATOM 7 C4' G A 678 55.440 68.637 48.382 1.00 39.40 C
ATOM 8 O4' G A 678 55.238 68.328 46.982 1.00 40.59 O
ATOM 9 C3' G A 678 56.862 69.162 48.412 1.00 40.24 C
ATOM 10 O3' G A 678 57.421 69.119 49.720 1.00 41.40 O
ATOM 11 C2' G A 678 57.562 68.198 47.468 1.00 38.51 C
ATOM 12 O2' G A 678 57.833 66.971 48.108 1.00 37.76 O
ATOM 13 C1' G A 678 56.486 67.992 46.394 1.00 38.69 C
ATOM 14 N9 G A 678 56.695 68.824 45.211 1.00 38.75 N
ATOM 15 C8 G A 678 56.124 70.043 44.928 1.00 38.90 C
ATOM 16 N7 G A 678 56.571 70.572 43.821 1.00 39.13 N
ATOM 17 C5 G A 678 57.483 69.641 43.338 1.00 40.35 C
ATOM 18 C6 G A 678 58.314 69.672 42.182 1.00 41.68 C
ATOM 19 O6 G A 678 58.428 70.564 41.334 1.00 43.59 O
ATOM 20 N1 G A 678 59.079 68.516 42.070 1.00 41.43 N
ATOM 21 C2 G A 678 59.062 67.470 42.956 1.00 41.27 C
ATOM 22 N2 G A 678 59.880 66.442 42.679 1.00 41.18 N
ATOM 23 N3 G A 678 58.304 67.433 44.037 1.00 41.15 N
ATOM 24 C4 G A 678 57.549 68.546 44.168 1.00 39.64 C
ATOM 25 P G A 679 58.553 70.179 50.130 1.00 43.16 P
ATOM 26 OP1 G A 679 58.960 69.908 51.539 1.00 44.47 O
ATOM 27 OP2 G A 679 58.067 71.524 49.760 1.00 42.58 O
ATOM 28 O5' G A 679 59.776 69.800 49.183 1.00 43.52 O
TER
ATOM 1 O3' U B 718 59.216 63.681 43.902 1.00 43.08 O
ATOM 2 P C B 719 60.610 62.977 44.278 1.00 44.23 P
ATOM 3 OP1 C B 719 61.613 63.415 43.282 1.00 47.35 O
ATOM 4 OP2 C B 719 60.372 61.532 44.484 1.00 47.31 O
ATOM 5 O5' C B 719 61.004 63.609 45.684 1.00 46.17 O
ATOM 6 C5' C B 719 61.416 64.986 45.797 1.00 45.22 C
ATOM 7 C4' C B 719 61.816 65.291 47.219 1.00 44.62 C
ATOM 8 O4' C B 719 60.652 65.277 48.085 1.00 44.22 O
ATOM 9 C3' C B 719 62.751 64.274 47.843 1.00 44.49 C
ATOM 10 O3' C B 719 64.089 64.502 47.450 1.00 44.81 O
ATOM 11 C2' C B 719 62.521 64.485 49.331 1.00 45.09 C
ATOM 12 O2' C B 719 63.202 65.612 49.832 1.00 45.02 O
ATOM 13 C1' C B 719 61.017 64.766 49.359 1.00 46.28 C
ATOM 14 N1 C B 719 60.198 63.574 49.647 1.00 48.54 N
ATOM 15 C2 C B 719 59.845 63.301 50.976 1.00 48.91 C
ATOM 16 O2 C B 719 60.249 64.048 51.873 1.00 50.11 O
ATOM 17 N3 C B 719 59.077 62.228 51.248 1.00 48.62 N
ATOM 18 C4 C B 719 58.672 61.432 50.262 1.00 48.75 C
ATOM 19 N4 C B 719 57.924 60.384 50.583 1.00 49.27 N
ATOM 20 C5 C B 719 59.021 61.676 48.902 1.00 50.16 C
ATOM 21 C6 C B 719 59.779 62.746 48.642 1.00 49.24 C
ATOM 22 P U B 720 65.117 63.280 47.417 1.00 46.65 P
ATOM 23 OP1 U B 720 66.437 63.766 46.957 1.00 46.11 O
ATOM 24 OP2 U B 720 64.457 62.168 46.695 1.00 47.72 O
ATOM 25 O5' U B 720 65.266 62.890 48.950 1.00 46.57 O
TER
Atoms:
OP1: (53.046,72.150,49.796)
OP2: (53.787,73.115,47.533)
C3': (56.862,69.162,48.412)
C1': (56.486,67.992,46.394)
C5': (54.369,69.580,48.856)
O6: (58.428,70.564,41.334)
O4': (55.238,68.328,46.982)
C8: (56.124,70.043,44.928)
C2: (59.062,67.470,42.956)
C6: (58.314,69.672,42.182)
C5: (57.483,69.641,43.338)
C4: (57.549,68.546,44.168)
P: (53.374,71.953,48.362)
C4': (55.440,68.637,48.382)
C2': (57.562,68.198,47.468)
O2': (57.833,66.971,48.108)
N1: (59.079,68.516,42.070)
N2: (59.880,66.442,42.679)
N3: (58.304,67.433,44.037)
N7: (56.571,70.572,43.821)
N9: (56.695,68.824,45.211)
O5': (54.506,70.845,48.213)
O3': (57.421,69.119,49.720)
OP2: (53.787,73.115,47.533)
C3': (56.862,69.162,48.412)
C1': (56.486,67.992,46.394)
C5': (54.369,69.580,48.856)
O6: (58.428,70.564,41.334)
O4': (55.238,68.328,46.982)
C8: (56.124,70.043,44.928)
C2: (59.062,67.470,42.956)
C6: (58.314,69.672,42.182)
C5: (57.483,69.641,43.338)
C4: (57.549,68.546,44.168)
P: (53.374,71.953,48.362)
C4': (55.440,68.637,48.382)
C2': (57.562,68.198,47.468)
O2': (57.833,66.971,48.108)
N1: (59.079,68.516,42.070)
N2: (59.880,66.442,42.679)
N3: (58.304,67.433,44.037)
N7: (56.571,70.572,43.821)
N9: (56.695,68.824,45.211)
O5': (54.506,70.845,48.213)
O3': (57.421,69.119,49.720)
C2: (59.845,63.301,50.976)
OP1: (61.613,63.415,43.282)
OP2: (60.372,61.532,44.484)
C4: (58.672,61.432,50.262)
O5': (61.004,63.609,45.684)
C3': (62.751,64.274,47.843)
C1': (61.017,64.766,49.359)
O4': (60.652,65.277,48.085)
C5': (61.416,64.986,45.797)
P: (60.610,62.977,44.278)
O2: (60.249,64.048,51.873)
C4': (61.816,65.291,47.219)
C2': (62.521,64.485,49.331)
O2': (63.202,65.612,49.832)
N1: (60.198,63.574,49.647)
N3: (59.077,62.228,51.248)
N4: (57.924,60.384,50.583)
C6: (59.779,62.746,48.642)
C5: (59.021,61.676,48.902)
O3': (64.089,64.502,47.450)
OP1: (61.613,63.415,43.282)
OP2: (60.372,61.532,44.484)
C4: (58.672,61.432,50.262)
O5': (61.004,63.609,45.684)
C3': (62.751,64.274,47.843)
C1': (61.017,64.766,49.359)
O4': (60.652,65.277,48.085)
C5': (61.416,64.986,45.797)
P: (60.610,62.977,44.278)
O2: (60.249,64.048,51.873)
C4': (61.816,65.291,47.219)
C2': (62.521,64.485,49.331)
O2': (63.202,65.612,49.832)
N1: (60.198,63.574,49.647)
N3: (59.077,62.228,51.248)
N4: (57.924,60.384,50.583)
C6: (59.779,62.746,48.642)
C5: (59.021,61.676,48.902)
O3': (64.089,64.502,47.450)
Image (generated by PyMOL):