Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1937:12390
Extra
PDB:
ATOM 1 O3' A A 936 37.821 -52.492 32.979 1.00 45.60 O
ATOM 2 P G A 937 36.450 -51.926 32.379 1.00 46.22 P
ATOM 3 OP1 G A 937 35.374 -52.298 33.332 1.00 46.16 O
ATOM 4 OP2 G A 937 36.356 -52.379 30.950 1.00 46.69 O
ATOM 5 O5' G A 937 36.669 -50.369 32.438 1.00 45.77 O
ATOM 6 C5' G A 937 36.400 -49.679 33.634 1.00 45.33 C
ATOM 7 C4' G A 937 36.436 -48.216 33.419 1.00 44.99 C
ATOM 8 O4' G A 937 37.721 -47.873 32.822 1.00 44.99 O
ATOM 9 C3' G A 937 35.351 -47.688 32.478 1.00 45.11 C
ATOM 10 O3' G A 937 34.529 -46.722 33.153 1.00 44.76 O
ATOM 11 C2' G A 937 36.151 -47.029 31.337 1.00 45.18 C
ATOM 12 O2' G A 937 35.627 -45.822 30.839 1.00 45.02 O
ATOM 13 C1' G A 937 37.536 -46.817 31.943 1.00 44.93 C
ATOM 14 N9 G A 937 38.578 -46.801 30.916 1.00 45.13 N
ATOM 15 C8 G A 937 38.878 -47.767 30.026 1.00 45.58 C
ATOM 16 N7 G A 937 39.709 -47.376 29.101 1.00 45.68 N
ATOM 17 C5 G A 937 39.920 -46.053 29.348 1.00 45.28 C
ATOM 18 C6 G A 937 40.721 -45.098 28.671 1.00 45.20 C
ATOM 19 O6 G A 937 41.428 -45.235 27.672 1.00 45.46 O
ATOM 20 N1 G A 937 40.677 -43.850 29.259 1.00 44.76 N
ATOM 21 C2 G A 937 39.928 -43.562 30.366 1.00 44.45 C
ATOM 22 N2 G A 937 39.999 -42.302 30.810 1.00 44.06 N
ATOM 23 N3 G A 937 39.175 -44.447 30.992 1.00 44.53 N
ATOM 24 C4 G A 937 39.214 -45.677 30.443 1.00 44.95 C
ATOM 25 P G A 938 33.089 -47.140 33.786 1.00 42.64 P
ATOM 26 OP1 G A 938 33.170 -46.939 35.268 1.00 42.27 O
ATOM 27 OP2 G A 938 32.767 -48.484 33.282 1.00 43.11 O
ATOM 28 O5' G A 938 32.100 -46.088 33.142 1.00 42.58 O
TER
ATOM 1 O3' A B2389 37.144 -41.814 33.980 1.00 45.27 O
ATOM 2 P C B2390 38.645 -41.434 34.483 1.00 40.27 P
ATOM 3 OP1 C B2390 38.492 -40.224 35.357 1.00 39.84 O
ATOM 4 OP2 C B2390 39.508 -41.327 33.277 1.00 40.48 O
ATOM 5 O5' C B2390 39.066 -42.695 35.370 1.00 40.35 O
ATOM 6 C5' C B2390 38.606 -43.987 35.086 1.00 40.72 C
ATOM 7 C4' C B2390 39.345 -45.017 35.898 1.00 40.77 C
ATOM 8 O4' C B2390 40.757 -44.911 35.625 1.00 40.77 O
ATOM 9 C3' C B2390 39.255 -44.862 37.406 1.00 40.44 C
ATOM 10 O3' C B2390 38.116 -45.456 37.948 1.00 40.51 O
ATOM 11 C2' C B2390 40.524 -45.497 37.912 1.00 40.47 C
ATOM 12 O2' C B2390 40.380 -46.903 37.985 1.00 40.80 O
ATOM 13 C1' C B2390 41.503 -45.159 36.802 1.00 40.59 C
ATOM 14 N1 C B2390 42.254 -43.969 37.127 1.00 40.24 N
ATOM 15 C2 C B2390 43.151 -43.978 38.223 1.00 40.02 C
ATOM 16 O2 C B2390 43.358 -45.020 38.932 1.00 40.14 O
ATOM 17 N3 C B2390 43.785 -42.831 38.525 1.00 39.71 N
ATOM 18 C4 C B2390 43.538 -41.763 37.792 1.00 39.61 C
ATOM 19 N4 C B2390 44.175 -40.630 38.110 1.00 39.30 N
ATOM 20 C5 C B2390 42.629 -41.743 36.698 1.00 39.82 C
ATOM 21 C6 C B2390 42.009 -42.872 36.393 1.00 40.13 C
ATOM 22 P G B2391 37.122 -44.568 38.775 1.00 44.28 P
ATOM 23 OP1 G B2391 35.950 -45.386 39.133 1.00 44.45 O
ATOM 24 OP2 G B2391 36.926 -43.433 37.971 1.00 44.18 O
ATOM 25 O5' G B2391 37.970 -44.211 40.069 1.00 43.94 O
TER
ATOM 2 P G A 937 36.450 -51.926 32.379 1.00 46.22 P
ATOM 3 OP1 G A 937 35.374 -52.298 33.332 1.00 46.16 O
ATOM 4 OP2 G A 937 36.356 -52.379 30.950 1.00 46.69 O
ATOM 5 O5' G A 937 36.669 -50.369 32.438 1.00 45.77 O
ATOM 6 C5' G A 937 36.400 -49.679 33.634 1.00 45.33 C
ATOM 7 C4' G A 937 36.436 -48.216 33.419 1.00 44.99 C
ATOM 8 O4' G A 937 37.721 -47.873 32.822 1.00 44.99 O
ATOM 9 C3' G A 937 35.351 -47.688 32.478 1.00 45.11 C
ATOM 10 O3' G A 937 34.529 -46.722 33.153 1.00 44.76 O
ATOM 11 C2' G A 937 36.151 -47.029 31.337 1.00 45.18 C
ATOM 12 O2' G A 937 35.627 -45.822 30.839 1.00 45.02 O
ATOM 13 C1' G A 937 37.536 -46.817 31.943 1.00 44.93 C
ATOM 14 N9 G A 937 38.578 -46.801 30.916 1.00 45.13 N
ATOM 15 C8 G A 937 38.878 -47.767 30.026 1.00 45.58 C
ATOM 16 N7 G A 937 39.709 -47.376 29.101 1.00 45.68 N
ATOM 17 C5 G A 937 39.920 -46.053 29.348 1.00 45.28 C
ATOM 18 C6 G A 937 40.721 -45.098 28.671 1.00 45.20 C
ATOM 19 O6 G A 937 41.428 -45.235 27.672 1.00 45.46 O
ATOM 20 N1 G A 937 40.677 -43.850 29.259 1.00 44.76 N
ATOM 21 C2 G A 937 39.928 -43.562 30.366 1.00 44.45 C
ATOM 22 N2 G A 937 39.999 -42.302 30.810 1.00 44.06 N
ATOM 23 N3 G A 937 39.175 -44.447 30.992 1.00 44.53 N
ATOM 24 C4 G A 937 39.214 -45.677 30.443 1.00 44.95 C
ATOM 25 P G A 938 33.089 -47.140 33.786 1.00 42.64 P
ATOM 26 OP1 G A 938 33.170 -46.939 35.268 1.00 42.27 O
ATOM 27 OP2 G A 938 32.767 -48.484 33.282 1.00 43.11 O
ATOM 28 O5' G A 938 32.100 -46.088 33.142 1.00 42.58 O
TER
ATOM 1 O3' A B2389 37.144 -41.814 33.980 1.00 45.27 O
ATOM 2 P C B2390 38.645 -41.434 34.483 1.00 40.27 P
ATOM 3 OP1 C B2390 38.492 -40.224 35.357 1.00 39.84 O
ATOM 4 OP2 C B2390 39.508 -41.327 33.277 1.00 40.48 O
ATOM 5 O5' C B2390 39.066 -42.695 35.370 1.00 40.35 O
ATOM 6 C5' C B2390 38.606 -43.987 35.086 1.00 40.72 C
ATOM 7 C4' C B2390 39.345 -45.017 35.898 1.00 40.77 C
ATOM 8 O4' C B2390 40.757 -44.911 35.625 1.00 40.77 O
ATOM 9 C3' C B2390 39.255 -44.862 37.406 1.00 40.44 C
ATOM 10 O3' C B2390 38.116 -45.456 37.948 1.00 40.51 O
ATOM 11 C2' C B2390 40.524 -45.497 37.912 1.00 40.47 C
ATOM 12 O2' C B2390 40.380 -46.903 37.985 1.00 40.80 O
ATOM 13 C1' C B2390 41.503 -45.159 36.802 1.00 40.59 C
ATOM 14 N1 C B2390 42.254 -43.969 37.127 1.00 40.24 N
ATOM 15 C2 C B2390 43.151 -43.978 38.223 1.00 40.02 C
ATOM 16 O2 C B2390 43.358 -45.020 38.932 1.00 40.14 O
ATOM 17 N3 C B2390 43.785 -42.831 38.525 1.00 39.71 N
ATOM 18 C4 C B2390 43.538 -41.763 37.792 1.00 39.61 C
ATOM 19 N4 C B2390 44.175 -40.630 38.110 1.00 39.30 N
ATOM 20 C5 C B2390 42.629 -41.743 36.698 1.00 39.82 C
ATOM 21 C6 C B2390 42.009 -42.872 36.393 1.00 40.13 C
ATOM 22 P G B2391 37.122 -44.568 38.775 1.00 44.28 P
ATOM 23 OP1 G B2391 35.950 -45.386 39.133 1.00 44.45 O
ATOM 24 OP2 G B2391 36.926 -43.433 37.971 1.00 44.18 O
ATOM 25 O5' G B2391 37.970 -44.211 40.069 1.00 43.94 O
TER
Atoms:
OP1: (35.374,-52.298,33.332)
OP2: (36.356,-52.379,30.950)
C3': (35.351,-47.688,32.478)
C1': (37.536,-46.817,31.943)
C5': (36.400,-49.679,33.634)
O6: (41.428,-45.235,27.672)
O4': (37.721,-47.873,32.822)
C8: (38.878,-47.767,30.026)
C2: (39.928,-43.562,30.366)
C6: (40.721,-45.098,28.671)
C5: (39.920,-46.053,29.348)
C4: (39.214,-45.677,30.443)
P: (36.450,-51.926,32.379)
C4': (36.436,-48.216,33.419)
C2': (36.151,-47.029,31.337)
O2': (35.627,-45.822,30.839)
N1: (40.677,-43.850,29.259)
N2: (39.999,-42.302,30.810)
N3: (39.175,-44.447,30.992)
N7: (39.709,-47.376,29.101)
N9: (38.578,-46.801,30.916)
O5': (36.669,-50.369,32.438)
O3': (34.529,-46.722,33.153)
OP2: (36.356,-52.379,30.950)
C3': (35.351,-47.688,32.478)
C1': (37.536,-46.817,31.943)
C5': (36.400,-49.679,33.634)
O6: (41.428,-45.235,27.672)
O4': (37.721,-47.873,32.822)
C8: (38.878,-47.767,30.026)
C2: (39.928,-43.562,30.366)
C6: (40.721,-45.098,28.671)
C5: (39.920,-46.053,29.348)
C4: (39.214,-45.677,30.443)
P: (36.450,-51.926,32.379)
C4': (36.436,-48.216,33.419)
C2': (36.151,-47.029,31.337)
O2': (35.627,-45.822,30.839)
N1: (40.677,-43.850,29.259)
N2: (39.999,-42.302,30.810)
N3: (39.175,-44.447,30.992)
N7: (39.709,-47.376,29.101)
N9: (38.578,-46.801,30.916)
O5': (36.669,-50.369,32.438)
O3': (34.529,-46.722,33.153)
C2: (43.151,-43.978,38.223)
OP1: (38.492,-40.224,35.357)
OP2: (39.508,-41.327,33.277)
C4: (43.538,-41.763,37.792)
O5': (39.066,-42.695,35.370)
C3': (39.255,-44.862,37.406)
C1': (41.503,-45.159,36.802)
O4': (40.757,-44.911,35.625)
C5': (38.606,-43.987,35.086)
P: (38.645,-41.434,34.483)
O2: (43.358,-45.020,38.932)
C4': (39.345,-45.017,35.898)
C2': (40.524,-45.497,37.912)
O2': (40.380,-46.903,37.985)
N1: (42.254,-43.969,37.127)
N3: (43.785,-42.831,38.525)
N4: (44.175,-40.630,38.110)
C6: (42.009,-42.872,36.393)
C5: (42.629,-41.743,36.698)
O3': (38.116,-45.456,37.948)
OP1: (38.492,-40.224,35.357)
OP2: (39.508,-41.327,33.277)
C4: (43.538,-41.763,37.792)
O5': (39.066,-42.695,35.370)
C3': (39.255,-44.862,37.406)
C1': (41.503,-45.159,36.802)
O4': (40.757,-44.911,35.625)
C5': (38.606,-43.987,35.086)
P: (38.645,-41.434,34.483)
O2: (43.358,-45.020,38.932)
C4': (39.345,-45.017,35.898)
C2': (40.524,-45.497,37.912)
O2': (40.380,-46.903,37.985)
N1: (42.254,-43.969,37.127)
N3: (43.785,-42.831,38.525)
N4: (44.175,-40.630,38.110)
C6: (42.009,-42.872,36.393)
C5: (42.629,-41.743,36.698)
O3': (38.116,-45.456,37.948)
Image (generated by PyMOL):