Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0318:0319
Extra
PDB:
ATOM 1 O3' A A 317 19.234 129.060 27.025 1.00 46.74 O
ATOM 2 P C A 318 20.052 128.690 28.362 1.00 46.69 P
ATOM 3 OP1 C A 318 20.073 129.936 29.172 1.00 43.90 O
ATOM 4 OP2 C A 318 21.338 128.031 27.981 1.00 41.31 O
ATOM 5 O5' C A 318 19.143 127.620 29.121 1.00 45.84 O
ATOM 6 C5' C A 318 17.894 127.992 29.737 1.00 43.48 C
ATOM 7 C4' C A 318 17.688 127.193 31.003 1.00 44.14 C
ATOM 8 O4' C A 318 16.367 127.475 31.544 1.00 44.03 O
ATOM 9 C3' C A 318 17.742 125.675 30.832 1.00 45.15 C
ATOM 10 O3' C A 318 18.170 125.092 32.060 1.00 47.60 O
ATOM 11 C2' C A 318 16.276 125.323 30.647 1.00 43.74 C
ATOM 12 O2' C A 318 15.974 123.993 30.987 1.00 43.98 O
ATOM 13 C1' C A 318 15.646 126.266 31.660 1.00 45.65 C
ATOM 14 N1 C A 318 14.214 126.527 31.472 1.00 49.52 N
ATOM 15 C2 C A 318 13.755 127.173 30.302 1.00 51.99 C
ATOM 16 O2 C A 318 14.572 127.501 29.420 1.00 52.62 O
ATOM 17 N3 C A 318 12.433 127.418 30.169 1.00 54.24 N
ATOM 18 C4 C A 318 11.583 127.049 31.133 1.00 55.19 C
ATOM 19 N4 C A 318 10.290 127.330 30.970 1.00 56.49 N
ATOM 20 C5 C A 318 12.022 126.383 32.314 1.00 54.29 C
ATOM 21 C6 C A 318 13.330 126.146 32.440 1.00 50.35 C
ATOM 22 P A A 319 19.637 124.453 32.189 1.00 48.27 P
ATOM 23 OP1 A A 319 20.282 124.385 30.862 1.00 50.36 O
ATOM 24 OP2 A A 319 19.515 123.216 32.990 1.00 52.14 O
ATOM 25 O5' A A 319 20.403 125.527 33.084 1.00 49.16 O
TER
ATOM 1 O3' C B 318 18.170 125.092 32.060 1.00 47.60 O
ATOM 2 P A B 319 19.637 124.453 32.189 1.00 48.27 P
ATOM 3 OP1 A B 319 20.282 124.385 30.862 1.00 50.36 O
ATOM 4 OP2 A B 319 19.515 123.216 32.990 1.00 52.14 O
ATOM 5 O5' A B 319 20.403 125.527 33.084 1.00 49.16 O
ATOM 6 C5' A B 319 21.089 126.640 32.491 1.00 43.06 C
ATOM 7 C4' A B 319 22.560 126.550 32.797 1.00 42.16 C
ATOM 8 O4' A B 319 23.303 126.885 31.600 1.00 44.72 O
ATOM 9 C3' A B 319 23.137 127.466 33.867 1.00 41.34 C
ATOM 10 O3' A B 319 22.958 127.009 35.203 1.00 41.46 O
ATOM 11 C2' A B 319 24.606 127.456 33.487 1.00 42.63 C
ATOM 12 O2' A B 319 25.232 126.245 33.854 1.00 42.57 O
ATOM 13 C1' A B 319 24.512 127.532 31.959 1.00 43.74 C
ATOM 14 N9 A B 319 24.430 128.923 31.508 1.00 43.01 N
ATOM 15 C8 A B 319 23.320 129.591 31.058 1.00 40.99 C
ATOM 16 N7 A B 319 23.534 130.855 30.799 1.00 42.87 N
ATOM 17 C5 A B 319 24.881 131.031 31.078 1.00 41.99 C
ATOM 18 C6 A B 319 25.715 132.156 31.019 1.00 41.81 C
ATOM 19 N6 A B 319 25.294 133.370 30.652 1.00 39.90 N
ATOM 20 N1 A B 319 27.010 131.995 31.363 1.00 41.69 N
ATOM 21 C2 A B 319 27.423 130.781 31.744 1.00 41.25 C
ATOM 22 N3 A B 319 26.734 129.650 31.846 1.00 40.49 N
ATOM 23 C4 A B 319 25.452 129.846 31.496 1.00 41.99 C
ATOM 24 P G B 320 22.425 128.029 36.339 1.00 45.14 P
ATOM 25 OP1 G B 320 22.394 127.250 37.601 1.00 44.50 O
ATOM 26 OP2 G B 320 21.190 128.722 35.876 1.00 44.64 O
ATOM 27 O5' G B 320 23.557 129.148 36.451 1.00 45.92 O
TER
ATOM 2 P C A 318 20.052 128.690 28.362 1.00 46.69 P
ATOM 3 OP1 C A 318 20.073 129.936 29.172 1.00 43.90 O
ATOM 4 OP2 C A 318 21.338 128.031 27.981 1.00 41.31 O
ATOM 5 O5' C A 318 19.143 127.620 29.121 1.00 45.84 O
ATOM 6 C5' C A 318 17.894 127.992 29.737 1.00 43.48 C
ATOM 7 C4' C A 318 17.688 127.193 31.003 1.00 44.14 C
ATOM 8 O4' C A 318 16.367 127.475 31.544 1.00 44.03 O
ATOM 9 C3' C A 318 17.742 125.675 30.832 1.00 45.15 C
ATOM 10 O3' C A 318 18.170 125.092 32.060 1.00 47.60 O
ATOM 11 C2' C A 318 16.276 125.323 30.647 1.00 43.74 C
ATOM 12 O2' C A 318 15.974 123.993 30.987 1.00 43.98 O
ATOM 13 C1' C A 318 15.646 126.266 31.660 1.00 45.65 C
ATOM 14 N1 C A 318 14.214 126.527 31.472 1.00 49.52 N
ATOM 15 C2 C A 318 13.755 127.173 30.302 1.00 51.99 C
ATOM 16 O2 C A 318 14.572 127.501 29.420 1.00 52.62 O
ATOM 17 N3 C A 318 12.433 127.418 30.169 1.00 54.24 N
ATOM 18 C4 C A 318 11.583 127.049 31.133 1.00 55.19 C
ATOM 19 N4 C A 318 10.290 127.330 30.970 1.00 56.49 N
ATOM 20 C5 C A 318 12.022 126.383 32.314 1.00 54.29 C
ATOM 21 C6 C A 318 13.330 126.146 32.440 1.00 50.35 C
ATOM 22 P A A 319 19.637 124.453 32.189 1.00 48.27 P
ATOM 23 OP1 A A 319 20.282 124.385 30.862 1.00 50.36 O
ATOM 24 OP2 A A 319 19.515 123.216 32.990 1.00 52.14 O
ATOM 25 O5' A A 319 20.403 125.527 33.084 1.00 49.16 O
TER
ATOM 1 O3' C B 318 18.170 125.092 32.060 1.00 47.60 O
ATOM 2 P A B 319 19.637 124.453 32.189 1.00 48.27 P
ATOM 3 OP1 A B 319 20.282 124.385 30.862 1.00 50.36 O
ATOM 4 OP2 A B 319 19.515 123.216 32.990 1.00 52.14 O
ATOM 5 O5' A B 319 20.403 125.527 33.084 1.00 49.16 O
ATOM 6 C5' A B 319 21.089 126.640 32.491 1.00 43.06 C
ATOM 7 C4' A B 319 22.560 126.550 32.797 1.00 42.16 C
ATOM 8 O4' A B 319 23.303 126.885 31.600 1.00 44.72 O
ATOM 9 C3' A B 319 23.137 127.466 33.867 1.00 41.34 C
ATOM 10 O3' A B 319 22.958 127.009 35.203 1.00 41.46 O
ATOM 11 C2' A B 319 24.606 127.456 33.487 1.00 42.63 C
ATOM 12 O2' A B 319 25.232 126.245 33.854 1.00 42.57 O
ATOM 13 C1' A B 319 24.512 127.532 31.959 1.00 43.74 C
ATOM 14 N9 A B 319 24.430 128.923 31.508 1.00 43.01 N
ATOM 15 C8 A B 319 23.320 129.591 31.058 1.00 40.99 C
ATOM 16 N7 A B 319 23.534 130.855 30.799 1.00 42.87 N
ATOM 17 C5 A B 319 24.881 131.031 31.078 1.00 41.99 C
ATOM 18 C6 A B 319 25.715 132.156 31.019 1.00 41.81 C
ATOM 19 N6 A B 319 25.294 133.370 30.652 1.00 39.90 N
ATOM 20 N1 A B 319 27.010 131.995 31.363 1.00 41.69 N
ATOM 21 C2 A B 319 27.423 130.781 31.744 1.00 41.25 C
ATOM 22 N3 A B 319 26.734 129.650 31.846 1.00 40.49 N
ATOM 23 C4 A B 319 25.452 129.846 31.496 1.00 41.99 C
ATOM 24 P G B 320 22.425 128.029 36.339 1.00 45.14 P
ATOM 25 OP1 G B 320 22.394 127.250 37.601 1.00 44.50 O
ATOM 26 OP2 G B 320 21.190 128.722 35.876 1.00 44.64 O
ATOM 27 O5' G B 320 23.557 129.148 36.451 1.00 45.92 O
TER
Atoms:
C2: (13.755,127.173,30.302)
OP1: (20.073,129.936,29.172)
OP2: (21.338,128.031,27.981)
C4: (11.583,127.049,31.133)
O5': (19.143,127.620,29.121)
C3': (17.742,125.675,30.832)
C1': (15.646,126.266,31.660)
O4': (16.367,127.475,31.544)
C5': (17.894,127.992,29.737)
P: (20.052,128.690,28.362)
O2: (14.572,127.501,29.420)
C4': (17.688,127.193,31.003)
C2': (16.276,125.323,30.647)
O2': (15.974,123.993,30.987)
N1: (14.214,126.527,31.472)
N3: (12.433,127.418,30.169)
N4: (10.290,127.330,30.970)
C6: (13.330,126.146,32.440)
C5: (12.022,126.383,32.314)
O3': (18.170,125.092,32.060)
OP1: (20.073,129.936,29.172)
OP2: (21.338,128.031,27.981)
C4: (11.583,127.049,31.133)
O5': (19.143,127.620,29.121)
C3': (17.742,125.675,30.832)
C1': (15.646,126.266,31.660)
O4': (16.367,127.475,31.544)
C5': (17.894,127.992,29.737)
P: (20.052,128.690,28.362)
O2: (14.572,127.501,29.420)
C4': (17.688,127.193,31.003)
C2': (16.276,125.323,30.647)
O2': (15.974,123.993,30.987)
N1: (14.214,126.527,31.472)
N3: (12.433,127.418,30.169)
N4: (10.290,127.330,30.970)
C6: (13.330,126.146,32.440)
C5: (12.022,126.383,32.314)
O3': (18.170,125.092,32.060)
OP1: (20.282,124.385,30.862)
OP2: (19.515,123.216,32.990)
C3': (23.137,127.466,33.867)
C1': (24.512,127.532,31.959)
C5': (21.089,126.640,32.491)
O4': (23.303,126.885,31.600)
C8: (23.320,129.591,31.058)
O2': (25.232,126.245,33.854)
C6: (25.715,132.156,31.019)
C5: (24.881,131.031,31.078)
C4: (25.452,129.846,31.496)
P: (19.637,124.453,32.189)
C4': (22.560,126.550,32.797)
C2': (24.606,127.456,33.487)
C2: (27.423,130.781,31.744)
N1: (27.010,131.995,31.363)
N3: (26.734,129.650,31.846)
N6: (25.294,133.370,30.652)
N7: (23.534,130.855,30.799)
N9: (24.430,128.923,31.508)
O5': (20.403,125.527,33.084)
O3': (22.958,127.009,35.203)
OP2: (19.515,123.216,32.990)
C3': (23.137,127.466,33.867)
C1': (24.512,127.532,31.959)
C5': (21.089,126.640,32.491)
O4': (23.303,126.885,31.600)
C8: (23.320,129.591,31.058)
O2': (25.232,126.245,33.854)
C6: (25.715,132.156,31.019)
C5: (24.881,131.031,31.078)
C4: (25.452,129.846,31.496)
P: (19.637,124.453,32.189)
C4': (22.560,126.550,32.797)
C2': (24.606,127.456,33.487)
C2: (27.423,130.781,31.744)
N1: (27.010,131.995,31.363)
N3: (26.734,129.650,31.846)
N6: (25.294,133.370,30.652)
N7: (23.534,130.855,30.799)
N9: (24.430,128.923,31.508)
O5': (20.403,125.527,33.084)
O3': (22.958,127.009,35.203)
Image (generated by PyMOL):