Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0318:0319
Extra
PDB:
ATOM 1 O3' A A 317 19.315 129.025 26.937 1.00 52.91 O
ATOM 2 P C A 318 20.086 128.602 28.290 1.00 52.43 P
ATOM 3 OP1 C A 318 20.087 129.798 29.168 1.00 50.18 O
ATOM 4 OP2 C A 318 21.376 127.949 27.911 1.00 50.72 O
ATOM 5 O5' C A 318 19.160 127.523 29.006 1.00 52.32 O
ATOM 6 C5' C A 318 17.921 127.898 29.633 1.00 51.03 C
ATOM 7 C4' C A 318 17.745 127.136 30.924 1.00 50.51 C
ATOM 8 O4' C A 318 16.435 127.435 31.476 1.00 50.88 O
ATOM 9 C3' C A 318 17.796 125.618 30.798 1.00 50.38 C
ATOM 10 O3' C A 318 18.258 125.086 32.035 1.00 52.18 O
ATOM 11 C2' C A 318 16.326 125.257 30.644 1.00 49.54 C
ATOM 12 O2' C A 318 16.026 123.935 31.028 1.00 47.99 O
ATOM 13 C1' C A 318 15.703 126.237 31.626 1.00 50.06 C
ATOM 14 N1 C A 318 14.278 126.522 31.423 1.00 52.11 N
ATOM 15 C2 C A 318 13.851 127.178 30.249 1.00 53.98 C
ATOM 16 O2 C A 318 14.689 127.464 29.368 1.00 53.73 O
ATOM 17 N3 C A 318 12.535 127.478 30.110 1.00 55.37 N
ATOM 18 C4 C A 318 11.665 127.146 31.075 1.00 56.19 C
ATOM 19 N4 C A 318 10.382 127.493 30.918 1.00 56.26 N
ATOM 20 C5 C A 318 12.072 126.454 32.251 1.00 54.79 C
ATOM 21 C6 C A 318 13.373 126.167 32.382 1.00 52.99 C
ATOM 22 P A A 319 19.747 124.500 32.161 1.00 52.45 P
ATOM 23 OP1 A A 319 20.337 124.382 30.805 1.00 52.30 O
ATOM 24 OP2 A A 319 19.684 123.303 33.033 1.00 51.52 O
ATOM 25 O5' A A 319 20.515 125.646 32.958 1.00 51.95 O
TER
ATOM 1 O3' C B 318 18.258 125.086 32.035 1.00 52.18 O
ATOM 2 P A B 319 19.747 124.500 32.161 1.00 52.45 P
ATOM 3 OP1 A B 319 20.337 124.382 30.805 1.00 52.30 O
ATOM 4 OP2 A B 319 19.684 123.303 33.033 1.00 51.52 O
ATOM 5 O5' A B 319 20.515 125.646 32.958 1.00 51.95 O
ATOM 6 C5' A B 319 21.296 126.631 32.266 1.00 49.60 C
ATOM 7 C4' A B 319 22.740 126.533 32.685 1.00 48.15 C
ATOM 8 O4' A B 319 23.578 126.854 31.547 1.00 50.01 O
ATOM 9 C3' A B 319 23.212 127.471 33.786 1.00 46.70 C
ATOM 10 O3' A B 319 22.956 127.006 35.101 1.00 46.20 O
ATOM 11 C2' A B 319 24.702 127.500 33.519 1.00 48.42 C
ATOM 12 O2' A B 319 25.316 126.312 33.975 1.00 48.17 O
ATOM 13 C1' A B 319 24.724 127.561 31.987 1.00 50.00 C
ATOM 14 N9 A B 319 24.614 128.948 31.515 1.00 51.05 N
ATOM 15 C8 A B 319 23.478 129.618 31.129 1.00 50.37 C
ATOM 16 N7 A B 319 23.680 130.881 30.847 1.00 50.71 N
ATOM 17 C5 A B 319 25.041 131.054 31.042 1.00 50.29 C
ATOM 18 C6 A B 319 25.872 132.180 30.938 1.00 49.70 C
ATOM 19 N6 A B 319 25.433 133.397 30.622 1.00 48.91 N
ATOM 20 N1 A B 319 27.186 132.014 31.189 1.00 50.46 N
ATOM 21 C2 A B 319 27.624 130.798 31.535 1.00 51.10 C
ATOM 22 N3 A B 319 26.941 129.669 31.684 1.00 50.67 N
ATOM 23 C4 A B 319 25.636 129.866 31.423 1.00 50.98 C
ATOM 24 P G B 320 22.537 128.050 36.255 1.00 46.70 P
ATOM 25 OP1 G B 320 22.582 127.306 37.537 1.00 45.22 O
ATOM 26 OP2 G B 320 21.293 128.753 35.855 1.00 46.10 O
ATOM 27 O5' G B 320 23.702 129.132 36.267 1.00 48.19 O
TER
ATOM 2 P C A 318 20.086 128.602 28.290 1.00 52.43 P
ATOM 3 OP1 C A 318 20.087 129.798 29.168 1.00 50.18 O
ATOM 4 OP2 C A 318 21.376 127.949 27.911 1.00 50.72 O
ATOM 5 O5' C A 318 19.160 127.523 29.006 1.00 52.32 O
ATOM 6 C5' C A 318 17.921 127.898 29.633 1.00 51.03 C
ATOM 7 C4' C A 318 17.745 127.136 30.924 1.00 50.51 C
ATOM 8 O4' C A 318 16.435 127.435 31.476 1.00 50.88 O
ATOM 9 C3' C A 318 17.796 125.618 30.798 1.00 50.38 C
ATOM 10 O3' C A 318 18.258 125.086 32.035 1.00 52.18 O
ATOM 11 C2' C A 318 16.326 125.257 30.644 1.00 49.54 C
ATOM 12 O2' C A 318 16.026 123.935 31.028 1.00 47.99 O
ATOM 13 C1' C A 318 15.703 126.237 31.626 1.00 50.06 C
ATOM 14 N1 C A 318 14.278 126.522 31.423 1.00 52.11 N
ATOM 15 C2 C A 318 13.851 127.178 30.249 1.00 53.98 C
ATOM 16 O2 C A 318 14.689 127.464 29.368 1.00 53.73 O
ATOM 17 N3 C A 318 12.535 127.478 30.110 1.00 55.37 N
ATOM 18 C4 C A 318 11.665 127.146 31.075 1.00 56.19 C
ATOM 19 N4 C A 318 10.382 127.493 30.918 1.00 56.26 N
ATOM 20 C5 C A 318 12.072 126.454 32.251 1.00 54.79 C
ATOM 21 C6 C A 318 13.373 126.167 32.382 1.00 52.99 C
ATOM 22 P A A 319 19.747 124.500 32.161 1.00 52.45 P
ATOM 23 OP1 A A 319 20.337 124.382 30.805 1.00 52.30 O
ATOM 24 OP2 A A 319 19.684 123.303 33.033 1.00 51.52 O
ATOM 25 O5' A A 319 20.515 125.646 32.958 1.00 51.95 O
TER
ATOM 1 O3' C B 318 18.258 125.086 32.035 1.00 52.18 O
ATOM 2 P A B 319 19.747 124.500 32.161 1.00 52.45 P
ATOM 3 OP1 A B 319 20.337 124.382 30.805 1.00 52.30 O
ATOM 4 OP2 A B 319 19.684 123.303 33.033 1.00 51.52 O
ATOM 5 O5' A B 319 20.515 125.646 32.958 1.00 51.95 O
ATOM 6 C5' A B 319 21.296 126.631 32.266 1.00 49.60 C
ATOM 7 C4' A B 319 22.740 126.533 32.685 1.00 48.15 C
ATOM 8 O4' A B 319 23.578 126.854 31.547 1.00 50.01 O
ATOM 9 C3' A B 319 23.212 127.471 33.786 1.00 46.70 C
ATOM 10 O3' A B 319 22.956 127.006 35.101 1.00 46.20 O
ATOM 11 C2' A B 319 24.702 127.500 33.519 1.00 48.42 C
ATOM 12 O2' A B 319 25.316 126.312 33.975 1.00 48.17 O
ATOM 13 C1' A B 319 24.724 127.561 31.987 1.00 50.00 C
ATOM 14 N9 A B 319 24.614 128.948 31.515 1.00 51.05 N
ATOM 15 C8 A B 319 23.478 129.618 31.129 1.00 50.37 C
ATOM 16 N7 A B 319 23.680 130.881 30.847 1.00 50.71 N
ATOM 17 C5 A B 319 25.041 131.054 31.042 1.00 50.29 C
ATOM 18 C6 A B 319 25.872 132.180 30.938 1.00 49.70 C
ATOM 19 N6 A B 319 25.433 133.397 30.622 1.00 48.91 N
ATOM 20 N1 A B 319 27.186 132.014 31.189 1.00 50.46 N
ATOM 21 C2 A B 319 27.624 130.798 31.535 1.00 51.10 C
ATOM 22 N3 A B 319 26.941 129.669 31.684 1.00 50.67 N
ATOM 23 C4 A B 319 25.636 129.866 31.423 1.00 50.98 C
ATOM 24 P G B 320 22.537 128.050 36.255 1.00 46.70 P
ATOM 25 OP1 G B 320 22.582 127.306 37.537 1.00 45.22 O
ATOM 26 OP2 G B 320 21.293 128.753 35.855 1.00 46.10 O
ATOM 27 O5' G B 320 23.702 129.132 36.267 1.00 48.19 O
TER
Atoms:
C2: (13.851,127.178,30.249)
OP1: (20.087,129.798,29.168)
OP2: (21.376,127.949,27.911)
C4: (11.665,127.146,31.075)
O5': (19.160,127.523,29.006)
C3': (17.796,125.618,30.798)
C1': (15.703,126.237,31.626)
O4': (16.435,127.435,31.476)
C5': (17.921,127.898,29.633)
P: (20.086,128.602,28.290)
O2: (14.689,127.464,29.368)
C4': (17.745,127.136,30.924)
C2': (16.326,125.257,30.644)
O2': (16.026,123.935,31.028)
N1: (14.278,126.522,31.423)
N3: (12.535,127.478,30.110)
N4: (10.382,127.493,30.918)
C6: (13.373,126.167,32.382)
C5: (12.072,126.454,32.251)
O3': (18.258,125.086,32.035)
OP1: (20.087,129.798,29.168)
OP2: (21.376,127.949,27.911)
C4: (11.665,127.146,31.075)
O5': (19.160,127.523,29.006)
C3': (17.796,125.618,30.798)
C1': (15.703,126.237,31.626)
O4': (16.435,127.435,31.476)
C5': (17.921,127.898,29.633)
P: (20.086,128.602,28.290)
O2: (14.689,127.464,29.368)
C4': (17.745,127.136,30.924)
C2': (16.326,125.257,30.644)
O2': (16.026,123.935,31.028)
N1: (14.278,126.522,31.423)
N3: (12.535,127.478,30.110)
N4: (10.382,127.493,30.918)
C6: (13.373,126.167,32.382)
C5: (12.072,126.454,32.251)
O3': (18.258,125.086,32.035)
OP1: (20.337,124.382,30.805)
OP2: (19.684,123.303,33.033)
C3': (23.212,127.471,33.786)
C1': (24.724,127.561,31.987)
C5': (21.296,126.631,32.266)
O4': (23.578,126.854,31.547)
C8: (23.478,129.618,31.129)
O2': (25.316,126.312,33.975)
C6: (25.872,132.180,30.938)
C5: (25.041,131.054,31.042)
C4: (25.636,129.866,31.423)
P: (19.747,124.500,32.161)
C4': (22.740,126.533,32.685)
C2': (24.702,127.500,33.519)
C2: (27.624,130.798,31.535)
N1: (27.186,132.014,31.189)
N3: (26.941,129.669,31.684)
N6: (25.433,133.397,30.622)
N7: (23.680,130.881,30.847)
N9: (24.614,128.948,31.515)
O5': (20.515,125.646,32.958)
O3': (22.956,127.006,35.101)
OP2: (19.684,123.303,33.033)
C3': (23.212,127.471,33.786)
C1': (24.724,127.561,31.987)
C5': (21.296,126.631,32.266)
O4': (23.578,126.854,31.547)
C8: (23.478,129.618,31.129)
O2': (25.316,126.312,33.975)
C6: (25.872,132.180,30.938)
C5: (25.041,131.054,31.042)
C4: (25.636,129.866,31.423)
P: (19.747,124.500,32.161)
C4': (22.740,126.533,32.685)
C2': (24.702,127.500,33.519)
C2: (27.624,130.798,31.535)
N1: (27.186,132.014,31.189)
N3: (26.941,129.669,31.684)
N6: (25.433,133.397,30.622)
N7: (23.680,130.881,30.847)
N9: (24.614,128.948,31.515)
O5': (20.515,125.646,32.958)
O3': (22.956,127.006,35.101)
Image (generated by PyMOL):