ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1F:A580:A581

Extra

PDB:
ATOM 1 O3' G A 579 -42.541 123.546 203.397 1.00 70.94 O
ATOM 2 P U A 580 -42.493 122.653 202.079 1.00 48.16 P
ATOM 3 OP1 U A 580 -43.845 122.647 201.489 1.00 67.73 O
ATOM 4 OP2 U A 580 -41.837 121.369 202.436 1.00 50.37 O
ATOM 5 O5' U A 580 -41.523 123.472 201.104 1.00 57.03 O
ATOM 6 C5' U A 580 -40.184 123.738 201.500 1.00 60.70 C
ATOM 7 C4' U A 580 -39.344 124.013 200.275 1.00 49.08 C
ATOM 8 O4' U A 580 -39.546 122.923 199.339 1.00 39.25 O
ATOM 9 C3' U A 580 -39.723 125.303 199.559 1.00 58.06 C
ATOM 10 O3' U A 580 -38.578 126.136 199.281 1.00 52.37 O
ATOM 11 C2' U A 580 -40.411 124.799 198.290 1.00 53.72 C
ATOM 12 O2' U A 580 -40.177 125.651 197.186 1.00 69.04 O
ATOM 13 C1' U A 580 -39.744 123.453 198.055 1.00 46.22 C
ATOM 14 N1 U A 580 -40.622 122.522 197.339 1.00 48.60 N
ATOM 15 C2 U A 580 -40.202 121.931 196.164 1.00 54.93 C
ATOM 16 O2 U A 580 -39.112 122.129 195.663 1.00 56.71 O
ATOM 17 N3 U A 580 -41.114 121.085 195.592 1.00 50.92 N
ATOM 18 C4 U A 580 -42.369 120.792 196.075 1.00 48.17 C
ATOM 19 O4 U A 580 -43.078 120.019 195.459 1.00 54.06 O
ATOM 20 C5 U A 580 -42.737 121.447 197.298 1.00 55.73 C
ATOM 21 C6 U A 580 -41.864 122.273 197.875 1.00 51.15 C
ATOM 22 P G A 581 -38.663 127.718 199.544 1.00 47.13 P
ATOM 23 OP1 G A 581 -38.975 127.879 200.985 1.00 60.60 O
ATOM 24 OP2 G A 581 -39.482 128.390 198.489 1.00 44.44 O
ATOM 25 O5' G A 581 -37.165 128.200 199.359 1.00 55.06 O
TER

ATOM 1 O3' U B 580 -38.578 126.136 199.281 1.00 52.37 O
ATOM 2 P G B 581 -38.663 127.718 199.544 1.00 47.13 P
ATOM 3 OP1 G B 581 -38.975 127.879 200.985 1.00 60.60 O
ATOM 4 OP2 G B 581 -39.482 128.390 198.489 1.00 44.44 O
ATOM 5 O5' G B 581 -37.165 128.200 199.359 1.00 55.06 O
ATOM 6 C5' G B 581 -36.335 127.715 198.343 1.00 45.94 C
ATOM 7 C4' G B 581 -34.964 128.196 198.763 1.00 44.39 C
ATOM 8 O4' G B 581 -33.930 127.407 198.150 1.00 46.20 O
ATOM 9 C3' G B 581 -34.593 129.612 198.358 1.00 42.14 C
ATOM 10 O3' G B 581 -35.292 130.561 199.157 1.00 39.35 O
ATOM 11 C2' G B 581 -33.108 129.572 198.690 1.00 54.05 C
ATOM 12 O2' G B 581 -32.854 129.615 200.086 1.00 52.97 O
ATOM 13 C1' G B 581 -32.748 128.186 198.157 1.00 53.47 C
ATOM 14 N9 G B 581 -32.208 128.115 196.807 1.00 49.87 N
ATOM 15 C8 G B 581 -32.418 127.071 195.946 1.00 50.12 C
ATOM 16 N7 G B 581 -31.833 127.220 194.800 1.00 51.18 N
ATOM 17 C5 G B 581 -31.194 128.445 194.913 1.00 47.62 C
ATOM 18 C6 G B 581 -30.402 129.125 193.970 1.00 53.80 C
ATOM 19 O6 G B 581 -30.110 128.756 192.832 1.00 67.23 O
ATOM 20 N1 G B 581 -29.936 130.342 194.450 1.00 51.99 N
ATOM 21 C2 G B 581 -30.205 130.836 195.702 1.00 51.47 C
ATOM 22 N2 G B 581 -29.653 132.030 195.977 1.00 49.59 N
ATOM 23 N3 G B 581 -30.953 130.205 196.609 1.00 52.34 N
ATOM 24 C4 G B 581 -31.412 129.016 196.143 1.00 48.50 C
ATOM 25 P C B 582 -36.303 131.611 198.477 1.00 40.78 P
ATOM 26 OP1 C B 582 -37.268 132.001 199.528 1.00 42.87 O
ATOM 27 OP2 C B 582 -36.858 131.052 197.226 1.00 62.97 O
ATOM 28 O5' C B 582 -35.332 132.818 198.054 1.00 42.28 O
TER

Atoms:
C4: (-42.369,120.792,196.075)
N3: (-41.114,121.085,195.592)
OP1: (-43.845,122.647,201.489)
OP2: (-41.837,121.369,202.436)
C2: (-40.202,121.931,196.164)
C1': (-39.744,123.453,198.055)
C3': (-39.723,125.303,199.559)
O5': (-41.523,123.472,201.104)
O4': (-39.546,122.923,199.339)
C5': (-40.184,123.738,201.500)
P: (-42.493,122.653,202.079)
C4': (-39.344,124.013,200.275)
C2': (-40.411,124.799,198.290)
O2': (-40.177,125.651,197.186)
N1: (-40.622,122.522,197.339)
O4: (-43.078,120.019,195.459)
O2: (-39.112,122.129,195.663)
C6: (-41.864,122.273,197.875)
C5: (-42.737,121.447,197.298)
O3': (-38.578,126.136,199.281)
OP1: (-38.975,127.879,200.985)
OP2: (-39.482,128.390,198.489)
C3': (-34.593,129.612,198.358)
C1': (-32.748,128.186,198.157)
C5': (-36.335,127.715,198.343)
O6: (-30.110,128.756,192.832)
O4': (-33.930,127.407,198.150)
C8: (-32.418,127.071,195.946)
C2: (-30.205,130.836,195.702)
C6: (-30.402,129.125,193.970)
C5: (-31.194,128.445,194.913)
C4: (-31.412,129.016,196.143)
P: (-38.663,127.718,199.544)
C4': (-34.964,128.196,198.763)
C2': (-33.108,129.572,198.690)
O2': (-32.854,129.615,200.086)
N1: (-29.936,130.342,194.450)
N2: (-29.653,132.030,195.977)
N3: (-30.953,130.205,196.609)
N7: (-31.833,127.220,194.800)
N9: (-32.208,128.115,196.807)
O5': (-37.165,128.200,199.359)
O3': (-35.292,130.561,199.157)
Image (generated by PyMOL):
PyMOL image
show in jmol