Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A561:A562
Extra
PDB:
ATOM 1 O3' G A 560 -83.422 -92.822 0.785 1.00 0.01 O
ATOM 2 P U A 561 -83.276 -91.510 -0.097 1.00 0.01 P
ATOM 3 OP1 U A 561 -84.575 -90.856 -0.102 1.00 0.01 O
ATOM 4 OP2 U A 561 -82.689 -91.930 -1.373 1.00 0.01 O
ATOM 5 O5' U A 561 -82.234 -90.634 0.712 1.00 0.01 O
ATOM 6 C5' U A 561 -80.940 -91.133 0.986 1.00 0.01 C
ATOM 7 C4' U A 561 -80.007 -90.021 1.281 1.00 0.01 C
ATOM 8 O4' U A 561 -80.132 -89.051 0.250 1.00 0.01 O
ATOM 9 C3' U A 561 -80.294 -89.279 2.561 1.00 0.01 C
ATOM 10 O3' U A 561 -79.611 -89.847 3.651 1.00 0.01 O
ATOM 11 C2' U A 561 -79.889 -87.841 2.269 1.00 0.01 C
ATOM 12 O2' U A 561 -78.525 -87.619 2.603 1.00 0.01 O
ATOM 13 C1' U A 561 -80.057 -87.752 0.756 1.00 0.01 C
ATOM 14 N1 U A 561 -81.283 -87.065 0.330 1.00 0.01 N
ATOM 15 C2 U A 561 -81.168 -86.139 -0.630 1.00 0.01 C
ATOM 16 O2 U A 561 -80.092 -85.810 -1.024 1.00 0.01 O
ATOM 17 N3 U A 561 -82.320 -85.594 -1.070 1.00 0.01 N
ATOM 18 C4 U A 561 -83.582 -85.890 -0.686 1.00 0.01 C
ATOM 19 O4 U A 561 -84.548 -85.331 -1.174 1.00 0.01 O
ATOM 20 C5 U A 561 -83.637 -86.892 0.282 1.00 0.01 C
ATOM 21 C6 U A 561 -82.516 -87.459 0.716 1.00 0.01 C
ATOM 22 P A A 562 -80.281 -89.863 5.085 1.00 0.01 P
ATOM 23 OP1 A A 562 -81.074 -91.082 5.195 1.00 0.01 O
ATOM 24 OP2 A A 562 -80.949 -88.558 5.247 1.00 0.01 O
ATOM 25 O5' A A 562 -79.042 -89.974 6.034 1.00 0.01 O
TER
ATOM 1 O3' U B 561 -79.611 -89.847 3.651 1.00 0.01 O
ATOM 2 P A B 562 -80.281 -89.863 5.085 1.00 0.01 P
ATOM 3 OP1 A B 562 -81.074 -91.082 5.195 1.00 0.01 O
ATOM 4 OP2 A B 562 -80.949 -88.558 5.247 1.00 0.01 O
ATOM 5 O5' A B 562 -79.042 -89.974 6.034 1.00 0.01 O
ATOM 6 C5' A B 562 -77.953 -89.096 5.900 1.00 0.01 C
ATOM 7 C4' A B 562 -76.898 -89.403 6.910 1.00 0.01 C
ATOM 8 O4' A B 562 -75.660 -88.777 6.528 1.00 0.01 O
ATOM 9 C3' A B 562 -77.143 -88.877 8.291 1.00 0.01 C
ATOM 10 O3' A B 562 -78.047 -89.659 9.024 1.00 0.01 O
ATOM 11 C2' A B 562 -75.761 -88.895 8.859 1.00 0.01 C
ATOM 12 O2' A B 562 -75.380 -90.231 9.135 1.00 0.01 O
ATOM 13 C1' A B 562 -74.955 -88.407 7.668 1.00 0.01 C
ATOM 14 N9 A B 562 -74.775 -86.944 7.651 1.00 0.01 N
ATOM 15 C8 A B 562 -75.296 -86.053 6.762 1.00 0.01 C
ATOM 16 N7 A B 562 -74.952 -84.806 6.931 1.00 0.01 N
ATOM 17 C5 A B 562 -74.124 -84.904 8.029 1.00 0.01 C
ATOM 18 C6 A B 562 -73.412 -83.926 8.729 1.00 0.01 C
ATOM 19 N6 A B 562 -73.461 -82.653 8.411 1.00 0.01 N
ATOM 20 N1 A B 562 -72.666 -84.291 9.766 1.00 0.01 N
ATOM 21 C2 A B 562 -72.664 -85.593 10.069 1.00 0.01 C
ATOM 22 N3 A B 562 -73.283 -86.609 9.492 1.00 0.01 N
ATOM 23 C4 A B 562 -74.002 -86.197 8.465 1.00 0.01 C
ATOM 24 P C B 563 -79.100 -88.951 9.964 1.00 0.01 P
ATOM 25 OP1 C B 563 -79.975 -89.976 10.490 1.00 0.01 O
ATOM 26 OP2 C B 563 -79.680 -87.855 9.198 1.00 0.01 O
ATOM 27 O5' C B 563 -78.187 -88.383 11.112 1.00 0.01 O
TER
ATOM 2 P U A 561 -83.276 -91.510 -0.097 1.00 0.01 P
ATOM 3 OP1 U A 561 -84.575 -90.856 -0.102 1.00 0.01 O
ATOM 4 OP2 U A 561 -82.689 -91.930 -1.373 1.00 0.01 O
ATOM 5 O5' U A 561 -82.234 -90.634 0.712 1.00 0.01 O
ATOM 6 C5' U A 561 -80.940 -91.133 0.986 1.00 0.01 C
ATOM 7 C4' U A 561 -80.007 -90.021 1.281 1.00 0.01 C
ATOM 8 O4' U A 561 -80.132 -89.051 0.250 1.00 0.01 O
ATOM 9 C3' U A 561 -80.294 -89.279 2.561 1.00 0.01 C
ATOM 10 O3' U A 561 -79.611 -89.847 3.651 1.00 0.01 O
ATOM 11 C2' U A 561 -79.889 -87.841 2.269 1.00 0.01 C
ATOM 12 O2' U A 561 -78.525 -87.619 2.603 1.00 0.01 O
ATOM 13 C1' U A 561 -80.057 -87.752 0.756 1.00 0.01 C
ATOM 14 N1 U A 561 -81.283 -87.065 0.330 1.00 0.01 N
ATOM 15 C2 U A 561 -81.168 -86.139 -0.630 1.00 0.01 C
ATOM 16 O2 U A 561 -80.092 -85.810 -1.024 1.00 0.01 O
ATOM 17 N3 U A 561 -82.320 -85.594 -1.070 1.00 0.01 N
ATOM 18 C4 U A 561 -83.582 -85.890 -0.686 1.00 0.01 C
ATOM 19 O4 U A 561 -84.548 -85.331 -1.174 1.00 0.01 O
ATOM 20 C5 U A 561 -83.637 -86.892 0.282 1.00 0.01 C
ATOM 21 C6 U A 561 -82.516 -87.459 0.716 1.00 0.01 C
ATOM 22 P A A 562 -80.281 -89.863 5.085 1.00 0.01 P
ATOM 23 OP1 A A 562 -81.074 -91.082 5.195 1.00 0.01 O
ATOM 24 OP2 A A 562 -80.949 -88.558 5.247 1.00 0.01 O
ATOM 25 O5' A A 562 -79.042 -89.974 6.034 1.00 0.01 O
TER
ATOM 1 O3' U B 561 -79.611 -89.847 3.651 1.00 0.01 O
ATOM 2 P A B 562 -80.281 -89.863 5.085 1.00 0.01 P
ATOM 3 OP1 A B 562 -81.074 -91.082 5.195 1.00 0.01 O
ATOM 4 OP2 A B 562 -80.949 -88.558 5.247 1.00 0.01 O
ATOM 5 O5' A B 562 -79.042 -89.974 6.034 1.00 0.01 O
ATOM 6 C5' A B 562 -77.953 -89.096 5.900 1.00 0.01 C
ATOM 7 C4' A B 562 -76.898 -89.403 6.910 1.00 0.01 C
ATOM 8 O4' A B 562 -75.660 -88.777 6.528 1.00 0.01 O
ATOM 9 C3' A B 562 -77.143 -88.877 8.291 1.00 0.01 C
ATOM 10 O3' A B 562 -78.047 -89.659 9.024 1.00 0.01 O
ATOM 11 C2' A B 562 -75.761 -88.895 8.859 1.00 0.01 C
ATOM 12 O2' A B 562 -75.380 -90.231 9.135 1.00 0.01 O
ATOM 13 C1' A B 562 -74.955 -88.407 7.668 1.00 0.01 C
ATOM 14 N9 A B 562 -74.775 -86.944 7.651 1.00 0.01 N
ATOM 15 C8 A B 562 -75.296 -86.053 6.762 1.00 0.01 C
ATOM 16 N7 A B 562 -74.952 -84.806 6.931 1.00 0.01 N
ATOM 17 C5 A B 562 -74.124 -84.904 8.029 1.00 0.01 C
ATOM 18 C6 A B 562 -73.412 -83.926 8.729 1.00 0.01 C
ATOM 19 N6 A B 562 -73.461 -82.653 8.411 1.00 0.01 N
ATOM 20 N1 A B 562 -72.666 -84.291 9.766 1.00 0.01 N
ATOM 21 C2 A B 562 -72.664 -85.593 10.069 1.00 0.01 C
ATOM 22 N3 A B 562 -73.283 -86.609 9.492 1.00 0.01 N
ATOM 23 C4 A B 562 -74.002 -86.197 8.465 1.00 0.01 C
ATOM 24 P C B 563 -79.100 -88.951 9.964 1.00 0.01 P
ATOM 25 OP1 C B 563 -79.975 -89.976 10.490 1.00 0.01 O
ATOM 26 OP2 C B 563 -79.680 -87.855 9.198 1.00 0.01 O
ATOM 27 O5' C B 563 -78.187 -88.383 11.112 1.00 0.01 O
TER
Atoms:
C4: (-83.582,-85.890,-0.686)
N3: (-82.320,-85.594,-1.070)
OP1: (-84.575,-90.856,-0.102)
OP2: (-82.689,-91.930,-1.373)
C2: (-81.168,-86.139,-0.630)
C1': (-80.057,-87.752,0.756)
C3': (-80.294,-89.279,2.561)
O5': (-82.234,-90.634,0.712)
O4': (-80.132,-89.051,0.250)
C5': (-80.940,-91.133,0.986)
P: (-83.276,-91.510,-0.097)
C4': (-80.007,-90.021,1.281)
C2': (-79.889,-87.841,2.269)
O2': (-78.525,-87.619,2.603)
N1: (-81.283,-87.065,0.330)
O4: (-84.548,-85.331,-1.174)
O2: (-80.092,-85.810,-1.024)
C6: (-82.516,-87.459,0.716)
C5: (-83.637,-86.892,0.282)
O3': (-79.611,-89.847,3.651)
N3: (-82.320,-85.594,-1.070)
OP1: (-84.575,-90.856,-0.102)
OP2: (-82.689,-91.930,-1.373)
C2: (-81.168,-86.139,-0.630)
C1': (-80.057,-87.752,0.756)
C3': (-80.294,-89.279,2.561)
O5': (-82.234,-90.634,0.712)
O4': (-80.132,-89.051,0.250)
C5': (-80.940,-91.133,0.986)
P: (-83.276,-91.510,-0.097)
C4': (-80.007,-90.021,1.281)
C2': (-79.889,-87.841,2.269)
O2': (-78.525,-87.619,2.603)
N1: (-81.283,-87.065,0.330)
O4: (-84.548,-85.331,-1.174)
O2: (-80.092,-85.810,-1.024)
C6: (-82.516,-87.459,0.716)
C5: (-83.637,-86.892,0.282)
O3': (-79.611,-89.847,3.651)
OP1: (-81.074,-91.082,5.195)
OP2: (-80.949,-88.558,5.247)
C3': (-77.143,-88.877,8.291)
C1': (-74.955,-88.407,7.668)
C5': (-77.953,-89.096,5.900)
O4': (-75.660,-88.777,6.528)
C8: (-75.296,-86.053,6.762)
O2': (-75.380,-90.231,9.135)
C6: (-73.412,-83.926,8.729)
C5: (-74.124,-84.904,8.029)
C4: (-74.002,-86.197,8.465)
P: (-80.281,-89.863,5.085)
C4': (-76.898,-89.403,6.910)
C2': (-75.761,-88.895,8.859)
C2: (-72.664,-85.593,10.069)
N1: (-72.666,-84.291,9.766)
N3: (-73.283,-86.609,9.492)
N6: (-73.461,-82.653,8.411)
N7: (-74.952,-84.806,6.931)
N9: (-74.775,-86.944,7.651)
O5': (-79.042,-89.974,6.034)
O3': (-78.047,-89.659,9.024)
OP2: (-80.949,-88.558,5.247)
C3': (-77.143,-88.877,8.291)
C1': (-74.955,-88.407,7.668)
C5': (-77.953,-89.096,5.900)
O4': (-75.660,-88.777,6.528)
C8: (-75.296,-86.053,6.762)
O2': (-75.380,-90.231,9.135)
C6: (-73.412,-83.926,8.729)
C5: (-74.124,-84.904,8.029)
C4: (-74.002,-86.197,8.465)
P: (-80.281,-89.863,5.085)
C4': (-76.898,-89.403,6.910)
C2': (-75.761,-88.895,8.859)
C2: (-72.664,-85.593,10.069)
N1: (-72.666,-84.291,9.766)
N3: (-73.283,-86.609,9.492)
N6: (-73.461,-82.653,8.411)
N7: (-74.952,-84.806,6.931)
N9: (-74.775,-86.944,7.651)
O5': (-79.042,-89.974,6.034)
O3': (-78.047,-89.659,9.024)
Image (generated by PyMOL):