Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21251:21252
Extra
PDB:
ATOM 1 O3' G A1250 -66.117 -36.125 33.391 1.00 79.94 O
ATOM 2 P U A1251 -67.458 -36.783 33.937 1.00 73.56 P
ATOM 3 OP1 U A1251 -67.645 -38.062 33.190 1.00 73.84 O
ATOM 4 OP2 U A1251 -68.477 -35.767 33.824 1.00 73.85 O
ATOM 5 O5' U A1251 -67.128 -37.084 35.463 1.00 73.18 O
ATOM 6 C5' U A1251 -66.206 -36.290 36.182 1.00 72.73 C
ATOM 7 C4' U A1251 -65.073 -37.110 36.767 1.00 72.35 C
ATOM 8 O4' U A1251 -65.589 -38.051 37.756 1.00 72.40 O
ATOM 9 C3' U A1251 -64.262 -37.960 35.781 1.00 72.37 C
ATOM 10 O3' U A1251 -62.930 -38.097 36.331 1.00 71.94 O
ATOM 11 C2' U A1251 -64.993 -39.304 35.900 1.00 72.65 C
ATOM 12 O2' U A1251 -64.300 -40.417 35.391 1.00 72.65 O
ATOM 13 C1' U A1251 -65.141 -39.354 37.411 1.00 72.44 C
ATOM 14 N1 U A1251 -66.090 -40.368 37.960 1.00 72.71 N
ATOM 15 C2 U A1251 -67.445 -40.141 37.815 1.00 73.11 C
ATOM 16 O2 U A1251 -67.861 -39.194 37.192 1.00 73.25 O
ATOM 17 N3 U A1251 -68.308 -41.051 38.373 1.00 73.36 N
ATOM 18 C4 U A1251 -67.926 -42.168 39.085 1.00 73.27 C
ATOM 19 O4 U A1251 -68.844 -42.888 39.513 1.00 73.56 O
ATOM 20 C5 U A1251 -66.491 -42.358 39.234 1.00 72.85 C
ATOM 21 C6 U A1251 -65.656 -41.459 38.695 1.00 72.60 C
ATOM 22 P G A1252 -61.594 -37.749 35.485 1.00 73.27 P
ATOM 23 OP1 G A1252 -61.699 -38.452 34.185 1.00 73.60 O
ATOM 24 OP2 G A1252 -60.447 -38.060 36.373 1.00 72.87 O
ATOM 25 O5' G A1252 -61.693 -36.180 35.240 1.00 73.23 O
TER
ATOM 1 O3' U B1251 -62.930 -38.097 36.331 1.00 71.94 O
ATOM 2 P G B1252 -61.594 -37.749 35.485 1.00 73.27 P
ATOM 3 OP1 G B1252 -61.699 -38.452 34.185 1.00 73.60 O
ATOM 4 OP2 G B1252 -60.447 -38.060 36.373 1.00 72.87 O
ATOM 5 O5' G B1252 -61.693 -36.180 35.240 1.00 73.23 O
ATOM 6 C5' G B1252 -61.859 -35.287 36.316 1.00 73.01 C
ATOM 7 C4' G B1252 -60.701 -34.334 36.420 1.00 72.65 C
ATOM 8 O4' G B1252 -60.729 -33.407 35.304 1.00 72.82 O
ATOM 9 C3' G B1252 -60.680 -33.464 37.668 1.00 72.36 C
ATOM 10 O3' G B1252 -60.051 -34.116 38.754 1.00 72.06 O
ATOM 11 C2' G B1252 -59.950 -32.216 37.209 1.00 72.20 C
ATOM 12 O2' G B1252 -58.544 -32.415 37.274 1.00 71.88 O
ATOM 13 C1' G B1252 -60.370 -32.121 35.733 1.00 72.59 C
ATOM 14 N9 G B1252 -61.537 -31.245 35.537 1.00 72.88 N
ATOM 15 C8 G B1252 -62.709 -31.648 34.937 1.00 73.33 C
ATOM 16 N7 G B1252 -63.601 -30.696 34.888 1.00 73.55 N
ATOM 17 C5 G B1252 -62.976 -29.588 35.493 1.00 73.22 C
ATOM 18 C6 G B1252 -63.420 -28.240 35.744 1.00 73.26 C
ATOM 19 O6 G B1252 -64.501 -27.698 35.482 1.00 73.62 O
ATOM 20 N1 G B1252 -62.469 -27.461 36.387 1.00 72.85 N
ATOM 21 C2 G B1252 -61.228 -27.900 36.750 1.00 72.45 C
ATOM 22 N2 G B1252 -60.422 -27.008 37.366 1.00 72.10 N
ATOM 23 N3 G B1252 -60.809 -29.142 36.517 1.00 72.43 N
ATOM 24 C4 G B1252 -61.704 -29.928 35.892 1.00 72.81 C
ATOM 25 P G B1253 -60.435 -33.750 40.274 1.00 75.55 P
ATOM 26 OP1 G B1253 -59.529 -34.526 41.149 1.00 75.27 O
ATOM 27 OP2 G B1253 -61.891 -33.939 40.425 1.00 75.90 O
ATOM 28 O5' G B1253 -60.075 -32.202 40.361 1.00 75.35 O
TER
ATOM 2 P U A1251 -67.458 -36.783 33.937 1.00 73.56 P
ATOM 3 OP1 U A1251 -67.645 -38.062 33.190 1.00 73.84 O
ATOM 4 OP2 U A1251 -68.477 -35.767 33.824 1.00 73.85 O
ATOM 5 O5' U A1251 -67.128 -37.084 35.463 1.00 73.18 O
ATOM 6 C5' U A1251 -66.206 -36.290 36.182 1.00 72.73 C
ATOM 7 C4' U A1251 -65.073 -37.110 36.767 1.00 72.35 C
ATOM 8 O4' U A1251 -65.589 -38.051 37.756 1.00 72.40 O
ATOM 9 C3' U A1251 -64.262 -37.960 35.781 1.00 72.37 C
ATOM 10 O3' U A1251 -62.930 -38.097 36.331 1.00 71.94 O
ATOM 11 C2' U A1251 -64.993 -39.304 35.900 1.00 72.65 C
ATOM 12 O2' U A1251 -64.300 -40.417 35.391 1.00 72.65 O
ATOM 13 C1' U A1251 -65.141 -39.354 37.411 1.00 72.44 C
ATOM 14 N1 U A1251 -66.090 -40.368 37.960 1.00 72.71 N
ATOM 15 C2 U A1251 -67.445 -40.141 37.815 1.00 73.11 C
ATOM 16 O2 U A1251 -67.861 -39.194 37.192 1.00 73.25 O
ATOM 17 N3 U A1251 -68.308 -41.051 38.373 1.00 73.36 N
ATOM 18 C4 U A1251 -67.926 -42.168 39.085 1.00 73.27 C
ATOM 19 O4 U A1251 -68.844 -42.888 39.513 1.00 73.56 O
ATOM 20 C5 U A1251 -66.491 -42.358 39.234 1.00 72.85 C
ATOM 21 C6 U A1251 -65.656 -41.459 38.695 1.00 72.60 C
ATOM 22 P G A1252 -61.594 -37.749 35.485 1.00 73.27 P
ATOM 23 OP1 G A1252 -61.699 -38.452 34.185 1.00 73.60 O
ATOM 24 OP2 G A1252 -60.447 -38.060 36.373 1.00 72.87 O
ATOM 25 O5' G A1252 -61.693 -36.180 35.240 1.00 73.23 O
TER
ATOM 1 O3' U B1251 -62.930 -38.097 36.331 1.00 71.94 O
ATOM 2 P G B1252 -61.594 -37.749 35.485 1.00 73.27 P
ATOM 3 OP1 G B1252 -61.699 -38.452 34.185 1.00 73.60 O
ATOM 4 OP2 G B1252 -60.447 -38.060 36.373 1.00 72.87 O
ATOM 5 O5' G B1252 -61.693 -36.180 35.240 1.00 73.23 O
ATOM 6 C5' G B1252 -61.859 -35.287 36.316 1.00 73.01 C
ATOM 7 C4' G B1252 -60.701 -34.334 36.420 1.00 72.65 C
ATOM 8 O4' G B1252 -60.729 -33.407 35.304 1.00 72.82 O
ATOM 9 C3' G B1252 -60.680 -33.464 37.668 1.00 72.36 C
ATOM 10 O3' G B1252 -60.051 -34.116 38.754 1.00 72.06 O
ATOM 11 C2' G B1252 -59.950 -32.216 37.209 1.00 72.20 C
ATOM 12 O2' G B1252 -58.544 -32.415 37.274 1.00 71.88 O
ATOM 13 C1' G B1252 -60.370 -32.121 35.733 1.00 72.59 C
ATOM 14 N9 G B1252 -61.537 -31.245 35.537 1.00 72.88 N
ATOM 15 C8 G B1252 -62.709 -31.648 34.937 1.00 73.33 C
ATOM 16 N7 G B1252 -63.601 -30.696 34.888 1.00 73.55 N
ATOM 17 C5 G B1252 -62.976 -29.588 35.493 1.00 73.22 C
ATOM 18 C6 G B1252 -63.420 -28.240 35.744 1.00 73.26 C
ATOM 19 O6 G B1252 -64.501 -27.698 35.482 1.00 73.62 O
ATOM 20 N1 G B1252 -62.469 -27.461 36.387 1.00 72.85 N
ATOM 21 C2 G B1252 -61.228 -27.900 36.750 1.00 72.45 C
ATOM 22 N2 G B1252 -60.422 -27.008 37.366 1.00 72.10 N
ATOM 23 N3 G B1252 -60.809 -29.142 36.517 1.00 72.43 N
ATOM 24 C4 G B1252 -61.704 -29.928 35.892 1.00 72.81 C
ATOM 25 P G B1253 -60.435 -33.750 40.274 1.00 75.55 P
ATOM 26 OP1 G B1253 -59.529 -34.526 41.149 1.00 75.27 O
ATOM 27 OP2 G B1253 -61.891 -33.939 40.425 1.00 75.90 O
ATOM 28 O5' G B1253 -60.075 -32.202 40.361 1.00 75.35 O
TER
Atoms:
C4: (-67.926,-42.168,39.085)
N3: (-68.308,-41.051,38.373)
OP1: (-67.645,-38.062,33.190)
OP2: (-68.477,-35.767,33.824)
C2: (-67.445,-40.141,37.815)
C1': (-65.141,-39.354,37.411)
C3': (-64.262,-37.960,35.781)
O5': (-67.128,-37.084,35.463)
O4': (-65.589,-38.051,37.756)
C5': (-66.206,-36.290,36.182)
P: (-67.458,-36.783,33.937)
C4': (-65.073,-37.110,36.767)
C2': (-64.993,-39.304,35.900)
O2': (-64.300,-40.417,35.391)
N1: (-66.090,-40.368,37.960)
O4: (-68.844,-42.888,39.513)
O2: (-67.861,-39.194,37.192)
C6: (-65.656,-41.459,38.695)
C5: (-66.491,-42.358,39.234)
O3': (-62.930,-38.097,36.331)
N3: (-68.308,-41.051,38.373)
OP1: (-67.645,-38.062,33.190)
OP2: (-68.477,-35.767,33.824)
C2: (-67.445,-40.141,37.815)
C1': (-65.141,-39.354,37.411)
C3': (-64.262,-37.960,35.781)
O5': (-67.128,-37.084,35.463)
O4': (-65.589,-38.051,37.756)
C5': (-66.206,-36.290,36.182)
P: (-67.458,-36.783,33.937)
C4': (-65.073,-37.110,36.767)
C2': (-64.993,-39.304,35.900)
O2': (-64.300,-40.417,35.391)
N1: (-66.090,-40.368,37.960)
O4: (-68.844,-42.888,39.513)
O2: (-67.861,-39.194,37.192)
C6: (-65.656,-41.459,38.695)
C5: (-66.491,-42.358,39.234)
O3': (-62.930,-38.097,36.331)
OP1: (-61.699,-38.452,34.185)
OP2: (-60.447,-38.060,36.373)
C3': (-60.680,-33.464,37.668)
C1': (-60.370,-32.121,35.733)
C5': (-61.859,-35.287,36.316)
O6: (-64.501,-27.698,35.482)
O4': (-60.729,-33.407,35.304)
C8: (-62.709,-31.648,34.937)
C2: (-61.228,-27.900,36.750)
C6: (-63.420,-28.240,35.744)
C5: (-62.976,-29.588,35.493)
C4: (-61.704,-29.928,35.892)
P: (-61.594,-37.749,35.485)
C4': (-60.701,-34.334,36.420)
C2': (-59.950,-32.216,37.209)
O2': (-58.544,-32.415,37.274)
N1: (-62.469,-27.461,36.387)
N2: (-60.422,-27.008,37.366)
N3: (-60.809,-29.142,36.517)
N7: (-63.601,-30.696,34.888)
N9: (-61.537,-31.245,35.537)
O5': (-61.693,-36.180,35.240)
O3': (-60.051,-34.116,38.754)
OP2: (-60.447,-38.060,36.373)
C3': (-60.680,-33.464,37.668)
C1': (-60.370,-32.121,35.733)
C5': (-61.859,-35.287,36.316)
O6: (-64.501,-27.698,35.482)
O4': (-60.729,-33.407,35.304)
C8: (-62.709,-31.648,34.937)
C2: (-61.228,-27.900,36.750)
C6: (-63.420,-28.240,35.744)
C5: (-62.976,-29.588,35.493)
C4: (-61.704,-29.928,35.892)
P: (-61.594,-37.749,35.485)
C4': (-60.701,-34.334,36.420)
C2': (-59.950,-32.216,37.209)
O2': (-58.544,-32.415,37.274)
N1: (-62.469,-27.461,36.387)
N2: (-60.422,-27.008,37.366)
N3: (-60.809,-29.142,36.517)
N7: (-63.601,-30.696,34.888)
N9: (-61.537,-31.245,35.537)
O5': (-61.693,-36.180,35.240)
O3': (-60.051,-34.116,38.754)
Image (generated by PyMOL):