Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12550:12551
Extra
PDB:
ATOM 1 O3' C A2549 28.451 -35.146 67.556 1.00 42.34 O
ATOM 2 P C A2550 29.111 -36.053 66.439 1.00 42.21 P
ATOM 3 OP1 C A2550 30.478 -35.898 66.602 1.00 42.11 O
ATOM 4 OP2 C A2550 28.522 -35.681 65.135 1.00 42.20 O
ATOM 5 O5' C A2550 28.665 -37.509 66.834 1.00 42.47 O
ATOM 6 C5' C A2550 29.325 -38.246 67.823 1.00 42.56 C
ATOM 7 C4' C A2550 28.967 -39.705 67.687 1.00 42.85 C
ATOM 8 O4' C A2550 27.521 -39.850 67.630 1.00 42.95 O
ATOM 9 C3' C A2550 29.494 -40.393 66.426 1.00 42.97 C
ATOM 10 O3' C A2550 30.743 -40.997 66.651 1.00 43.03 O
ATOM 11 C2' C A2550 28.451 -41.430 66.106 1.00 43.23 C
ATOM 12 O2' C A2550 28.763 -42.614 66.808 1.00 43.45 O
ATOM 13 C1' C A2550 27.171 -40.833 66.696 1.00 43.17 C
ATOM 14 N1 C A2550 26.265 -40.235 65.670 1.00 43.13 N
ATOM 15 C2 C A2550 25.315 -41.104 65.105 1.00 43.38 C
ATOM 16 O2 C A2550 25.336 -42.282 65.434 1.00 43.60 O
ATOM 17 N3 C A2550 24.375 -40.682 64.224 1.00 43.39 N
ATOM 18 C4 C A2550 24.355 -39.394 63.877 1.00 43.15 C
ATOM 19 N4 C A2550 23.435 -39.047 62.955 1.00 43.19 N
ATOM 20 C5 C A2550 25.331 -38.479 64.455 1.00 42.90 C
ATOM 21 C6 C A2550 26.251 -38.911 65.326 1.00 42.89 C
ATOM 22 P A A2551 32.081 -40.291 66.185 1.00 41.95 P
ATOM 23 OP1 A A2551 31.888 -38.889 66.381 1.00 41.69 O
ATOM 24 OP2 A A2551 32.384 -40.775 64.818 1.00 42.06 O
ATOM 25 O5' A A2551 33.163 -40.882 67.204 1.00 42.02 O
TER
ATOM 1 O3' C B2550 30.743 -40.997 66.651 1.00 43.03 O
ATOM 2 P A B2551 32.081 -40.291 66.185 1.00 41.95 P
ATOM 3 OP1 A B2551 31.888 -38.889 66.381 1.00 41.69 O
ATOM 4 OP2 A B2551 32.384 -40.775 64.818 1.00 42.06 O
ATOM 5 O5' A B2551 33.163 -40.882 67.204 1.00 42.02 O
ATOM 6 C5' A B2551 32.952 -40.922 68.610 1.00 42.03 C
ATOM 7 C4' A B2551 34.242 -40.611 69.332 1.00 41.94 C
ATOM 8 O4' A B2551 35.246 -41.583 68.930 1.00 42.11 O
ATOM 9 C3' A B2551 34.849 -39.226 69.023 1.00 41.66 C
ATOM 10 O3' A B2551 34.533 -38.255 70.006 1.00 41.50 O
ATOM 11 C2' A B2551 36.347 -39.474 68.975 1.00 41.68 C
ATOM 12 O2' A B2551 36.927 -39.270 70.269 1.00 41.65 O
ATOM 13 C1' A B2551 36.460 -40.952 68.610 1.00 41.96 C
ATOM 14 N9 A B2551 36.715 -41.131 67.174 1.00 41.99 N
ATOM 15 C8 A B2551 35.969 -40.579 66.194 1.00 41.90 C
ATOM 16 N7 A B2551 36.351 -40.866 64.988 1.00 41.97 N
ATOM 17 C5 A B2551 37.445 -41.648 65.181 1.00 42.11 C
ATOM 18 C6 A B2551 38.294 -42.254 64.243 1.00 42.25 C
ATOM 19 N6 A B2551 38.068 -42.092 62.947 1.00 42.25 N
ATOM 20 N1 A B2551 39.343 -42.995 64.685 1.00 42.39 N
ATOM 21 C2 A B2551 39.443 -43.071 66.017 1.00 42.38 C
ATOM 22 N3 A B2551 38.714 -42.540 67.019 1.00 42.27 N
ATOM 23 C4 A B2551 37.701 -41.824 66.526 1.00 42.13 C
ATOM 24 P G B2552 33.130 -37.505 70.039 1.00 41.04 P
ATOM 25 OP1 G B2552 32.938 -37.014 68.801 1.00 40.95 O
ATOM 26 OP2 G B2552 33.123 -36.577 71.113 1.00 40.89 O
ATOM 27 O5' G B2552 32.102 -38.674 70.360 1.00 41.28 O
TER
ATOM 2 P C A2550 29.111 -36.053 66.439 1.00 42.21 P
ATOM 3 OP1 C A2550 30.478 -35.898 66.602 1.00 42.11 O
ATOM 4 OP2 C A2550 28.522 -35.681 65.135 1.00 42.20 O
ATOM 5 O5' C A2550 28.665 -37.509 66.834 1.00 42.47 O
ATOM 6 C5' C A2550 29.325 -38.246 67.823 1.00 42.56 C
ATOM 7 C4' C A2550 28.967 -39.705 67.687 1.00 42.85 C
ATOM 8 O4' C A2550 27.521 -39.850 67.630 1.00 42.95 O
ATOM 9 C3' C A2550 29.494 -40.393 66.426 1.00 42.97 C
ATOM 10 O3' C A2550 30.743 -40.997 66.651 1.00 43.03 O
ATOM 11 C2' C A2550 28.451 -41.430 66.106 1.00 43.23 C
ATOM 12 O2' C A2550 28.763 -42.614 66.808 1.00 43.45 O
ATOM 13 C1' C A2550 27.171 -40.833 66.696 1.00 43.17 C
ATOM 14 N1 C A2550 26.265 -40.235 65.670 1.00 43.13 N
ATOM 15 C2 C A2550 25.315 -41.104 65.105 1.00 43.38 C
ATOM 16 O2 C A2550 25.336 -42.282 65.434 1.00 43.60 O
ATOM 17 N3 C A2550 24.375 -40.682 64.224 1.00 43.39 N
ATOM 18 C4 C A2550 24.355 -39.394 63.877 1.00 43.15 C
ATOM 19 N4 C A2550 23.435 -39.047 62.955 1.00 43.19 N
ATOM 20 C5 C A2550 25.331 -38.479 64.455 1.00 42.90 C
ATOM 21 C6 C A2550 26.251 -38.911 65.326 1.00 42.89 C
ATOM 22 P A A2551 32.081 -40.291 66.185 1.00 41.95 P
ATOM 23 OP1 A A2551 31.888 -38.889 66.381 1.00 41.69 O
ATOM 24 OP2 A A2551 32.384 -40.775 64.818 1.00 42.06 O
ATOM 25 O5' A A2551 33.163 -40.882 67.204 1.00 42.02 O
TER
ATOM 1 O3' C B2550 30.743 -40.997 66.651 1.00 43.03 O
ATOM 2 P A B2551 32.081 -40.291 66.185 1.00 41.95 P
ATOM 3 OP1 A B2551 31.888 -38.889 66.381 1.00 41.69 O
ATOM 4 OP2 A B2551 32.384 -40.775 64.818 1.00 42.06 O
ATOM 5 O5' A B2551 33.163 -40.882 67.204 1.00 42.02 O
ATOM 6 C5' A B2551 32.952 -40.922 68.610 1.00 42.03 C
ATOM 7 C4' A B2551 34.242 -40.611 69.332 1.00 41.94 C
ATOM 8 O4' A B2551 35.246 -41.583 68.930 1.00 42.11 O
ATOM 9 C3' A B2551 34.849 -39.226 69.023 1.00 41.66 C
ATOM 10 O3' A B2551 34.533 -38.255 70.006 1.00 41.50 O
ATOM 11 C2' A B2551 36.347 -39.474 68.975 1.00 41.68 C
ATOM 12 O2' A B2551 36.927 -39.270 70.269 1.00 41.65 O
ATOM 13 C1' A B2551 36.460 -40.952 68.610 1.00 41.96 C
ATOM 14 N9 A B2551 36.715 -41.131 67.174 1.00 41.99 N
ATOM 15 C8 A B2551 35.969 -40.579 66.194 1.00 41.90 C
ATOM 16 N7 A B2551 36.351 -40.866 64.988 1.00 41.97 N
ATOM 17 C5 A B2551 37.445 -41.648 65.181 1.00 42.11 C
ATOM 18 C6 A B2551 38.294 -42.254 64.243 1.00 42.25 C
ATOM 19 N6 A B2551 38.068 -42.092 62.947 1.00 42.25 N
ATOM 20 N1 A B2551 39.343 -42.995 64.685 1.00 42.39 N
ATOM 21 C2 A B2551 39.443 -43.071 66.017 1.00 42.38 C
ATOM 22 N3 A B2551 38.714 -42.540 67.019 1.00 42.27 N
ATOM 23 C4 A B2551 37.701 -41.824 66.526 1.00 42.13 C
ATOM 24 P G B2552 33.130 -37.505 70.039 1.00 41.04 P
ATOM 25 OP1 G B2552 32.938 -37.014 68.801 1.00 40.95 O
ATOM 26 OP2 G B2552 33.123 -36.577 71.113 1.00 40.89 O
ATOM 27 O5' G B2552 32.102 -38.674 70.360 1.00 41.28 O
TER
Atoms:
C2: (25.315,-41.104,65.105)
OP1: (30.478,-35.898,66.602)
OP2: (28.522,-35.681,65.135)
C4: (24.355,-39.394,63.877)
O5': (28.665,-37.509,66.834)
C3': (29.494,-40.393,66.426)
C1': (27.171,-40.833,66.696)
O4': (27.521,-39.850,67.630)
C5': (29.325,-38.246,67.823)
P: (29.111,-36.053,66.439)
O2: (25.336,-42.282,65.434)
C4': (28.967,-39.705,67.687)
C2': (28.451,-41.430,66.106)
O2': (28.763,-42.614,66.808)
N1: (26.265,-40.235,65.670)
N3: (24.375,-40.682,64.224)
N4: (23.435,-39.047,62.955)
C6: (26.251,-38.911,65.326)
C5: (25.331,-38.479,64.455)
O3': (30.743,-40.997,66.651)
OP1: (30.478,-35.898,66.602)
OP2: (28.522,-35.681,65.135)
C4: (24.355,-39.394,63.877)
O5': (28.665,-37.509,66.834)
C3': (29.494,-40.393,66.426)
C1': (27.171,-40.833,66.696)
O4': (27.521,-39.850,67.630)
C5': (29.325,-38.246,67.823)
P: (29.111,-36.053,66.439)
O2: (25.336,-42.282,65.434)
C4': (28.967,-39.705,67.687)
C2': (28.451,-41.430,66.106)
O2': (28.763,-42.614,66.808)
N1: (26.265,-40.235,65.670)
N3: (24.375,-40.682,64.224)
N4: (23.435,-39.047,62.955)
C6: (26.251,-38.911,65.326)
C5: (25.331,-38.479,64.455)
O3': (30.743,-40.997,66.651)
OP1: (31.888,-38.889,66.381)
OP2: (32.384,-40.775,64.818)
C3': (34.849,-39.226,69.023)
C1': (36.460,-40.952,68.610)
C5': (32.952,-40.922,68.610)
O4': (35.246,-41.583,68.930)
C8: (35.969,-40.579,66.194)
O2': (36.927,-39.270,70.269)
C6: (38.294,-42.254,64.243)
C5: (37.445,-41.648,65.181)
C4: (37.701,-41.824,66.526)
P: (32.081,-40.291,66.185)
C4': (34.242,-40.611,69.332)
C2': (36.347,-39.474,68.975)
C2: (39.443,-43.071,66.017)
N1: (39.343,-42.995,64.685)
N3: (38.714,-42.540,67.019)
N6: (38.068,-42.092,62.947)
N7: (36.351,-40.866,64.988)
N9: (36.715,-41.131,67.174)
O5': (33.163,-40.882,67.204)
O3': (34.533,-38.255,70.006)
OP2: (32.384,-40.775,64.818)
C3': (34.849,-39.226,69.023)
C1': (36.460,-40.952,68.610)
C5': (32.952,-40.922,68.610)
O4': (35.246,-41.583,68.930)
C8: (35.969,-40.579,66.194)
O2': (36.927,-39.270,70.269)
C6: (38.294,-42.254,64.243)
C5: (37.445,-41.648,65.181)
C4: (37.701,-41.824,66.526)
P: (32.081,-40.291,66.185)
C4': (34.242,-40.611,69.332)
C2': (36.347,-39.474,68.975)
C2: (39.443,-43.071,66.017)
N1: (39.343,-42.995,64.685)
N3: (38.714,-42.540,67.019)
N6: (38.068,-42.092,62.947)
N7: (36.351,-40.866,64.988)
N9: (36.715,-41.131,67.174)
O5': (33.163,-40.882,67.204)
O3': (34.533,-38.255,70.006)
Image (generated by PyMOL):