Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A874:A790
Extra
PDB:
ATOM 1 O3' A A 873 -19.584 110.157 105.053 1.00 23.58 O
ATOM 2 P G A 874 -20.033 108.681 104.600 1.00 58.31 P
ATOM 3 OP1 G A 874 -20.955 108.839 103.454 1.00 29.04 O
ATOM 4 OP2 G A 874 -20.472 107.921 105.798 1.00 31.16 O
ATOM 5 O5' G A 874 -18.682 108.028 104.073 1.00 10.48 O
ATOM 6 C5' G A 874 -18.655 107.134 102.951 1.00 9.19 C
ATOM 7 C4' G A 874 -17.463 107.455 102.091 1.00 8.17 C
ATOM 8 O4' G A 874 -16.401 107.932 102.943 1.00 8.33 O
ATOM 9 C3' G A 874 -16.859 106.301 101.310 1.00 6.51 C
ATOM 10 O3' G A 874 -17.526 106.089 100.061 1.00 7.82 O
ATOM 11 C2' G A 874 -15.403 106.732 101.154 1.00 7.15 C
ATOM 12 O2' G A 874 -15.192 107.638 100.091 1.00 7.34 O
ATOM 13 C1' G A 874 -15.155 107.476 102.465 1.00 6.34 C
ATOM 14 N9 G A 874 -14.574 106.633 103.500 1.00 0.79 N
ATOM 15 C8 G A 874 -15.212 106.129 104.606 1.00 0.79 C
ATOM 16 N7 G A 874 -14.430 105.396 105.351 1.00 0.79 N
ATOM 17 C5 G A 874 -13.207 105.420 104.699 1.00 0.79 C
ATOM 18 C6 G A 874 -11.994 104.807 105.031 1.00 0.79 C
ATOM 19 O6 G A 874 -11.744 104.095 105.988 1.00 0.79 O
ATOM 20 N1 G A 874 -11.005 105.082 104.107 1.00 0.79 N
ATOM 21 C2 G A 874 -11.174 105.842 102.992 1.00 0.79 C
ATOM 22 N2 G A 874 -10.111 105.963 102.203 1.00 0.79 N
ATOM 23 N3 G A 874 -12.305 106.434 102.666 1.00 0.79 N
ATOM 24 C4 G A 874 -13.276 106.179 103.560 1.00 0.79 C
ATOM 25 P G A 875 -17.509 104.623 99.384 1.00 33.52 P
ATOM 26 OP1 G A 875 -18.369 104.670 98.161 1.00 27.99 O
ATOM 27 OP2 G A 875 -17.809 103.648 100.443 1.00 26.44 O
ATOM 28 O5' G A 875 -15.999 104.441 98.925 1.00 1.19 O
TER
ATOM 1 O3' C B 789 -9.609 109.424 99.836 1.00 0.79 O
ATOM 2 P C B 790 -9.309 108.068 99.020 1.00 1.23 P
ATOM 3 OP1 C B 790 -10.401 107.137 99.390 1.00 3.15 O
ATOM 4 OP2 C B 790 -7.876 107.684 99.241 1.00 2.64 O
ATOM 5 O5' C B 790 -9.469 108.453 97.479 1.00 11.01 O
ATOM 6 C5' C B 790 -10.776 108.638 96.889 1.00 11.01 C
ATOM 7 C4' C B 790 -10.671 108.674 95.378 1.00 11.01 C
ATOM 8 O4' C B 790 -9.942 109.859 94.949 1.00 11.01 O
ATOM 9 C3' C B 790 -9.964 107.488 94.733 1.00 11.01 C
ATOM 10 O3' C B 790 -10.583 107.265 93.464 1.00 11.01 O
ATOM 11 C2' C B 790 -8.572 108.036 94.469 1.00 11.01 C
ATOM 12 O2' C B 790 -7.964 107.350 93.403 1.00 11.01 O
ATOM 13 C1' C B 790 -8.898 109.481 94.087 1.00 11.01 C
ATOM 14 N1 C B 790 -7.814 110.471 94.186 1.00 35.77 N
ATOM 15 C2 C B 790 -7.820 111.586 93.331 1.00 37.45 C
ATOM 16 O2 C B 790 -8.744 111.725 92.523 1.00 40.48 O
ATOM 17 N3 C B 790 -6.818 112.487 93.413 1.00 36.24 N
ATOM 18 C4 C B 790 -5.844 112.319 94.308 1.00 36.42 C
ATOM 19 N4 C B 790 -4.877 113.240 94.373 1.00 40.22 N
ATOM 20 C5 C B 790 -5.814 111.201 95.186 1.00 35.05 C
ATOM 21 C6 C B 790 -6.810 110.311 95.093 1.00 34.49 C
ATOM 22 P U B 791 -10.691 105.785 92.847 1.00 2.10 P
ATOM 23 OP1 U B 791 -10.410 104.812 93.926 1.00 8.10 O
ATOM 24 OP2 U B 791 -9.905 105.722 91.593 1.00 5.35 O
ATOM 25 O5' U B 791 -12.240 105.703 92.518 1.00 23.53 O
TER
ATOM 2 P G A 874 -20.033 108.681 104.600 1.00 58.31 P
ATOM 3 OP1 G A 874 -20.955 108.839 103.454 1.00 29.04 O
ATOM 4 OP2 G A 874 -20.472 107.921 105.798 1.00 31.16 O
ATOM 5 O5' G A 874 -18.682 108.028 104.073 1.00 10.48 O
ATOM 6 C5' G A 874 -18.655 107.134 102.951 1.00 9.19 C
ATOM 7 C4' G A 874 -17.463 107.455 102.091 1.00 8.17 C
ATOM 8 O4' G A 874 -16.401 107.932 102.943 1.00 8.33 O
ATOM 9 C3' G A 874 -16.859 106.301 101.310 1.00 6.51 C
ATOM 10 O3' G A 874 -17.526 106.089 100.061 1.00 7.82 O
ATOM 11 C2' G A 874 -15.403 106.732 101.154 1.00 7.15 C
ATOM 12 O2' G A 874 -15.192 107.638 100.091 1.00 7.34 O
ATOM 13 C1' G A 874 -15.155 107.476 102.465 1.00 6.34 C
ATOM 14 N9 G A 874 -14.574 106.633 103.500 1.00 0.79 N
ATOM 15 C8 G A 874 -15.212 106.129 104.606 1.00 0.79 C
ATOM 16 N7 G A 874 -14.430 105.396 105.351 1.00 0.79 N
ATOM 17 C5 G A 874 -13.207 105.420 104.699 1.00 0.79 C
ATOM 18 C6 G A 874 -11.994 104.807 105.031 1.00 0.79 C
ATOM 19 O6 G A 874 -11.744 104.095 105.988 1.00 0.79 O
ATOM 20 N1 G A 874 -11.005 105.082 104.107 1.00 0.79 N
ATOM 21 C2 G A 874 -11.174 105.842 102.992 1.00 0.79 C
ATOM 22 N2 G A 874 -10.111 105.963 102.203 1.00 0.79 N
ATOM 23 N3 G A 874 -12.305 106.434 102.666 1.00 0.79 N
ATOM 24 C4 G A 874 -13.276 106.179 103.560 1.00 0.79 C
ATOM 25 P G A 875 -17.509 104.623 99.384 1.00 33.52 P
ATOM 26 OP1 G A 875 -18.369 104.670 98.161 1.00 27.99 O
ATOM 27 OP2 G A 875 -17.809 103.648 100.443 1.00 26.44 O
ATOM 28 O5' G A 875 -15.999 104.441 98.925 1.00 1.19 O
TER
ATOM 1 O3' C B 789 -9.609 109.424 99.836 1.00 0.79 O
ATOM 2 P C B 790 -9.309 108.068 99.020 1.00 1.23 P
ATOM 3 OP1 C B 790 -10.401 107.137 99.390 1.00 3.15 O
ATOM 4 OP2 C B 790 -7.876 107.684 99.241 1.00 2.64 O
ATOM 5 O5' C B 790 -9.469 108.453 97.479 1.00 11.01 O
ATOM 6 C5' C B 790 -10.776 108.638 96.889 1.00 11.01 C
ATOM 7 C4' C B 790 -10.671 108.674 95.378 1.00 11.01 C
ATOM 8 O4' C B 790 -9.942 109.859 94.949 1.00 11.01 O
ATOM 9 C3' C B 790 -9.964 107.488 94.733 1.00 11.01 C
ATOM 10 O3' C B 790 -10.583 107.265 93.464 1.00 11.01 O
ATOM 11 C2' C B 790 -8.572 108.036 94.469 1.00 11.01 C
ATOM 12 O2' C B 790 -7.964 107.350 93.403 1.00 11.01 O
ATOM 13 C1' C B 790 -8.898 109.481 94.087 1.00 11.01 C
ATOM 14 N1 C B 790 -7.814 110.471 94.186 1.00 35.77 N
ATOM 15 C2 C B 790 -7.820 111.586 93.331 1.00 37.45 C
ATOM 16 O2 C B 790 -8.744 111.725 92.523 1.00 40.48 O
ATOM 17 N3 C B 790 -6.818 112.487 93.413 1.00 36.24 N
ATOM 18 C4 C B 790 -5.844 112.319 94.308 1.00 36.42 C
ATOM 19 N4 C B 790 -4.877 113.240 94.373 1.00 40.22 N
ATOM 20 C5 C B 790 -5.814 111.201 95.186 1.00 35.05 C
ATOM 21 C6 C B 790 -6.810 110.311 95.093 1.00 34.49 C
ATOM 22 P U B 791 -10.691 105.785 92.847 1.00 2.10 P
ATOM 23 OP1 U B 791 -10.410 104.812 93.926 1.00 8.10 O
ATOM 24 OP2 U B 791 -9.905 105.722 91.593 1.00 5.35 O
ATOM 25 O5' U B 791 -12.240 105.703 92.518 1.00 23.53 O
TER
Atoms:
OP1: (-20.955,108.839,103.454)
OP2: (-20.472,107.921,105.798)
C3': (-16.859,106.301,101.310)
C1': (-15.155,107.476,102.465)
C5': (-18.655,107.134,102.951)
O6: (-11.744,104.095,105.988)
O4': (-16.401,107.932,102.943)
C8: (-15.212,106.129,104.606)
C2: (-11.174,105.842,102.992)
C6: (-11.994,104.807,105.031)
C5: (-13.207,105.420,104.699)
C4: (-13.276,106.179,103.560)
P: (-20.033,108.681,104.600)
C4': (-17.463,107.455,102.091)
C2': (-15.403,106.732,101.154)
O2': (-15.192,107.638,100.091)
N1: (-11.005,105.082,104.107)
N2: (-10.111,105.963,102.203)
N3: (-12.305,106.434,102.666)
N7: (-14.430,105.396,105.351)
N9: (-14.574,106.633,103.500)
O5': (-18.682,108.028,104.073)
O3': (-17.526,106.089,100.061)
OP2: (-20.472,107.921,105.798)
C3': (-16.859,106.301,101.310)
C1': (-15.155,107.476,102.465)
C5': (-18.655,107.134,102.951)
O6: (-11.744,104.095,105.988)
O4': (-16.401,107.932,102.943)
C8: (-15.212,106.129,104.606)
C2: (-11.174,105.842,102.992)
C6: (-11.994,104.807,105.031)
C5: (-13.207,105.420,104.699)
C4: (-13.276,106.179,103.560)
P: (-20.033,108.681,104.600)
C4': (-17.463,107.455,102.091)
C2': (-15.403,106.732,101.154)
O2': (-15.192,107.638,100.091)
N1: (-11.005,105.082,104.107)
N2: (-10.111,105.963,102.203)
N3: (-12.305,106.434,102.666)
N7: (-14.430,105.396,105.351)
N9: (-14.574,106.633,103.500)
O5': (-18.682,108.028,104.073)
O3': (-17.526,106.089,100.061)
C2: (-7.820,111.586,93.331)
OP1: (-10.401,107.137,99.390)
OP2: (-7.876,107.684,99.241)
C4: (-5.844,112.319,94.308)
O5': (-9.469,108.453,97.479)
C3': (-9.964,107.488,94.733)
C1': (-8.898,109.481,94.087)
O4': (-9.942,109.859,94.949)
C5': (-10.776,108.638,96.889)
P: (-9.309,108.068,99.020)
O2: (-8.744,111.725,92.523)
C4': (-10.671,108.674,95.378)
C2': (-8.572,108.036,94.469)
O2': (-7.964,107.350,93.403)
N1: (-7.814,110.471,94.186)
N3: (-6.818,112.487,93.413)
N4: (-4.877,113.240,94.373)
C6: (-6.810,110.311,95.093)
C5: (-5.814,111.201,95.186)
O3': (-10.583,107.265,93.464)
OP1: (-10.401,107.137,99.390)
OP2: (-7.876,107.684,99.241)
C4: (-5.844,112.319,94.308)
O5': (-9.469,108.453,97.479)
C3': (-9.964,107.488,94.733)
C1': (-8.898,109.481,94.087)
O4': (-9.942,109.859,94.949)
C5': (-10.776,108.638,96.889)
P: (-9.309,108.068,99.020)
O2: (-8.744,111.725,92.523)
C4': (-10.671,108.674,95.378)
C2': (-8.572,108.036,94.469)
O2': (-7.964,107.350,93.403)
N1: (-7.814,110.471,94.186)
N3: (-6.818,112.487,93.413)
N4: (-4.877,113.240,94.373)
C6: (-6.810,110.311,95.093)
C5: (-5.814,111.201,95.186)
O3': (-10.583,107.265,93.464)
Image (generated by PyMOL):