Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0709:0924
Extra
PDB:
ATOM 1 O3' A A 708 28.428 66.237 51.026 1.00 52.33 O
ATOM 2 P G A 709 29.825 66.223 51.811 1.00 52.74 P
ATOM 3 OP1 G A 709 30.901 66.652 50.883 1.00 51.76 O
ATOM 4 OP2 G A 709 29.937 64.915 52.502 1.00 52.09 O
ATOM 5 O5' G A 709 29.641 67.381 52.892 1.00 53.19 O
ATOM 6 C5' G A 709 29.602 68.765 52.484 1.00 51.88 C
ATOM 7 C4' G A 709 29.341 69.673 53.668 1.00 51.23 C
ATOM 8 O4' G A 709 28.019 69.407 54.199 1.00 51.87 O
ATOM 9 C3' G A 709 30.243 69.526 54.884 1.00 50.76 C
ATOM 10 O3' G A 709 31.492 70.176 54.751 1.00 50.57 O
ATOM 11 C2' G A 709 29.399 70.173 55.966 1.00 51.60 C
ATOM 12 O2' G A 709 29.411 71.586 55.915 1.00 51.72 O
ATOM 13 C1' G A 709 28.017 69.629 55.603 1.00 52.45 C
ATOM 14 N9 G A 709 27.854 68.345 56.273 1.00 53.25 N
ATOM 15 C8 G A 709 27.924 67.087 55.718 1.00 54.04 C
ATOM 16 N7 G A 709 27.861 66.135 56.606 1.00 54.60 N
ATOM 17 C5 G A 709 27.717 66.805 57.815 1.00 53.97 C
ATOM 18 C6 G A 709 27.631 66.308 59.131 1.00 53.29 C
ATOM 19 O6 G A 709 27.683 65.137 59.513 1.00 52.72 O
ATOM 20 N1 G A 709 27.481 67.337 60.056 1.00 53.54 N
ATOM 21 C2 G A 709 27.430 68.675 59.750 1.00 52.78 C
ATOM 22 N2 G A 709 27.262 69.516 60.771 1.00 52.07 N
ATOM 23 N3 G A 709 27.532 69.150 58.529 1.00 52.55 N
ATOM 24 C4 G A 709 27.674 68.167 57.617 1.00 53.33 C
ATOM 25 P G A 710 32.836 69.372 55.092 1.00 51.11 P
ATOM 26 OP1 G A 710 33.963 70.296 54.848 1.00 53.24 O
ATOM 27 OP2 G A 710 32.797 68.063 54.394 1.00 51.02 O
ATOM 28 O5' G A 710 32.742 69.078 56.651 1.00 51.09 O
TER
ATOM 1 O3' C B 923 29.799 74.186 61.032 1.00 43.02 O
ATOM 2 P C B 924 28.529 73.387 61.599 1.00 43.64 P
ATOM 3 OP1 C B 924 28.041 72.535 60.490 1.00 44.64 O
ATOM 4 OP2 C B 924 27.594 74.338 62.268 1.00 42.39 O
ATOM 5 O5' C B 924 29.153 72.450 62.722 1.00 42.99 O
ATOM 6 C5' C B 924 30.173 71.494 62.407 1.00 43.26 C
ATOM 7 C4' C B 924 30.626 70.797 63.665 1.00 45.07 C
ATOM 8 O4' C B 924 31.150 71.785 64.587 1.00 46.71 O
ATOM 9 C3' C B 924 29.533 70.106 64.466 1.00 45.39 C
ATOM 10 O3' C B 924 29.284 68.811 63.927 1.00 45.77 O
ATOM 11 C2' C B 924 30.145 70.039 65.863 1.00 45.07 C
ATOM 12 O2' C B 924 31.087 68.991 65.990 1.00 44.70 O
ATOM 13 C1' C B 924 30.919 71.359 65.922 1.00 44.52 C
ATOM 14 N1 C B 924 30.314 72.470 66.691 1.00 41.66 N
ATOM 15 C2 C B 924 30.354 72.432 68.090 1.00 40.59 C
ATOM 16 O2 C B 924 30.843 71.444 68.655 1.00 42.57 O
ATOM 17 N3 C B 924 29.853 73.468 68.791 1.00 38.48 N
ATOM 18 C4 C B 924 29.308 74.499 68.156 1.00 37.69 C
ATOM 19 N4 C B 924 28.823 75.495 68.885 1.00 38.70 N
ATOM 20 C5 C B 924 29.233 74.556 66.741 1.00 39.52 C
ATOM 21 C6 C B 924 29.742 73.532 66.053 1.00 40.64 C
ATOM 22 P G B 925 27.774 68.291 63.745 1.00 46.05 P
ATOM 23 OP1 G B 925 27.813 67.209 62.738 1.00 45.06 O
ATOM 24 OP2 G B 925 26.868 69.458 63.544 1.00 44.67 O
ATOM 25 O5' G B 925 27.407 67.655 65.149 1.00 43.20 O
TER
ATOM 2 P G A 709 29.825 66.223 51.811 1.00 52.74 P
ATOM 3 OP1 G A 709 30.901 66.652 50.883 1.00 51.76 O
ATOM 4 OP2 G A 709 29.937 64.915 52.502 1.00 52.09 O
ATOM 5 O5' G A 709 29.641 67.381 52.892 1.00 53.19 O
ATOM 6 C5' G A 709 29.602 68.765 52.484 1.00 51.88 C
ATOM 7 C4' G A 709 29.341 69.673 53.668 1.00 51.23 C
ATOM 8 O4' G A 709 28.019 69.407 54.199 1.00 51.87 O
ATOM 9 C3' G A 709 30.243 69.526 54.884 1.00 50.76 C
ATOM 10 O3' G A 709 31.492 70.176 54.751 1.00 50.57 O
ATOM 11 C2' G A 709 29.399 70.173 55.966 1.00 51.60 C
ATOM 12 O2' G A 709 29.411 71.586 55.915 1.00 51.72 O
ATOM 13 C1' G A 709 28.017 69.629 55.603 1.00 52.45 C
ATOM 14 N9 G A 709 27.854 68.345 56.273 1.00 53.25 N
ATOM 15 C8 G A 709 27.924 67.087 55.718 1.00 54.04 C
ATOM 16 N7 G A 709 27.861 66.135 56.606 1.00 54.60 N
ATOM 17 C5 G A 709 27.717 66.805 57.815 1.00 53.97 C
ATOM 18 C6 G A 709 27.631 66.308 59.131 1.00 53.29 C
ATOM 19 O6 G A 709 27.683 65.137 59.513 1.00 52.72 O
ATOM 20 N1 G A 709 27.481 67.337 60.056 1.00 53.54 N
ATOM 21 C2 G A 709 27.430 68.675 59.750 1.00 52.78 C
ATOM 22 N2 G A 709 27.262 69.516 60.771 1.00 52.07 N
ATOM 23 N3 G A 709 27.532 69.150 58.529 1.00 52.55 N
ATOM 24 C4 G A 709 27.674 68.167 57.617 1.00 53.33 C
ATOM 25 P G A 710 32.836 69.372 55.092 1.00 51.11 P
ATOM 26 OP1 G A 710 33.963 70.296 54.848 1.00 53.24 O
ATOM 27 OP2 G A 710 32.797 68.063 54.394 1.00 51.02 O
ATOM 28 O5' G A 710 32.742 69.078 56.651 1.00 51.09 O
TER
ATOM 1 O3' C B 923 29.799 74.186 61.032 1.00 43.02 O
ATOM 2 P C B 924 28.529 73.387 61.599 1.00 43.64 P
ATOM 3 OP1 C B 924 28.041 72.535 60.490 1.00 44.64 O
ATOM 4 OP2 C B 924 27.594 74.338 62.268 1.00 42.39 O
ATOM 5 O5' C B 924 29.153 72.450 62.722 1.00 42.99 O
ATOM 6 C5' C B 924 30.173 71.494 62.407 1.00 43.26 C
ATOM 7 C4' C B 924 30.626 70.797 63.665 1.00 45.07 C
ATOM 8 O4' C B 924 31.150 71.785 64.587 1.00 46.71 O
ATOM 9 C3' C B 924 29.533 70.106 64.466 1.00 45.39 C
ATOM 10 O3' C B 924 29.284 68.811 63.927 1.00 45.77 O
ATOM 11 C2' C B 924 30.145 70.039 65.863 1.00 45.07 C
ATOM 12 O2' C B 924 31.087 68.991 65.990 1.00 44.70 O
ATOM 13 C1' C B 924 30.919 71.359 65.922 1.00 44.52 C
ATOM 14 N1 C B 924 30.314 72.470 66.691 1.00 41.66 N
ATOM 15 C2 C B 924 30.354 72.432 68.090 1.00 40.59 C
ATOM 16 O2 C B 924 30.843 71.444 68.655 1.00 42.57 O
ATOM 17 N3 C B 924 29.853 73.468 68.791 1.00 38.48 N
ATOM 18 C4 C B 924 29.308 74.499 68.156 1.00 37.69 C
ATOM 19 N4 C B 924 28.823 75.495 68.885 1.00 38.70 N
ATOM 20 C5 C B 924 29.233 74.556 66.741 1.00 39.52 C
ATOM 21 C6 C B 924 29.742 73.532 66.053 1.00 40.64 C
ATOM 22 P G B 925 27.774 68.291 63.745 1.00 46.05 P
ATOM 23 OP1 G B 925 27.813 67.209 62.738 1.00 45.06 O
ATOM 24 OP2 G B 925 26.868 69.458 63.544 1.00 44.67 O
ATOM 25 O5' G B 925 27.407 67.655 65.149 1.00 43.20 O
TER
Atoms:
OP1: (30.901,66.652,50.883)
OP2: (29.937,64.915,52.502)
C3': (30.243,69.526,54.884)
C1': (28.017,69.629,55.603)
C5': (29.602,68.765,52.484)
O6: (27.683,65.137,59.513)
O4': (28.019,69.407,54.199)
C8: (27.924,67.087,55.718)
C2: (27.430,68.675,59.750)
C6: (27.631,66.308,59.131)
C5: (27.717,66.805,57.815)
C4: (27.674,68.167,57.617)
P: (29.825,66.223,51.811)
C4': (29.341,69.673,53.668)
C2': (29.399,70.173,55.966)
O2': (29.411,71.586,55.915)
N1: (27.481,67.337,60.056)
N2: (27.262,69.516,60.771)
N3: (27.532,69.150,58.529)
N7: (27.861,66.135,56.606)
N9: (27.854,68.345,56.273)
O5': (29.641,67.381,52.892)
O3': (31.492,70.176,54.751)
OP2: (29.937,64.915,52.502)
C3': (30.243,69.526,54.884)
C1': (28.017,69.629,55.603)
C5': (29.602,68.765,52.484)
O6: (27.683,65.137,59.513)
O4': (28.019,69.407,54.199)
C8: (27.924,67.087,55.718)
C2: (27.430,68.675,59.750)
C6: (27.631,66.308,59.131)
C5: (27.717,66.805,57.815)
C4: (27.674,68.167,57.617)
P: (29.825,66.223,51.811)
C4': (29.341,69.673,53.668)
C2': (29.399,70.173,55.966)
O2': (29.411,71.586,55.915)
N1: (27.481,67.337,60.056)
N2: (27.262,69.516,60.771)
N3: (27.532,69.150,58.529)
N7: (27.861,66.135,56.606)
N9: (27.854,68.345,56.273)
O5': (29.641,67.381,52.892)
O3': (31.492,70.176,54.751)
C2: (30.354,72.432,68.090)
OP1: (28.041,72.535,60.490)
OP2: (27.594,74.338,62.268)
C4: (29.308,74.499,68.156)
O5': (29.153,72.450,62.722)
C3': (29.533,70.106,64.466)
C1': (30.919,71.359,65.922)
O4': (31.150,71.785,64.587)
C5': (30.173,71.494,62.407)
P: (28.529,73.387,61.599)
O2: (30.843,71.444,68.655)
C4': (30.626,70.797,63.665)
C2': (30.145,70.039,65.863)
O2': (31.087,68.991,65.990)
N1: (30.314,72.470,66.691)
N3: (29.853,73.468,68.791)
N4: (28.823,75.495,68.885)
C6: (29.742,73.532,66.053)
C5: (29.233,74.556,66.741)
O3': (29.284,68.811,63.927)
OP1: (28.041,72.535,60.490)
OP2: (27.594,74.338,62.268)
C4: (29.308,74.499,68.156)
O5': (29.153,72.450,62.722)
C3': (29.533,70.106,64.466)
C1': (30.919,71.359,65.922)
O4': (31.150,71.785,64.587)
C5': (30.173,71.494,62.407)
P: (28.529,73.387,61.599)
O2: (30.843,71.444,68.655)
C4': (30.626,70.797,63.665)
C2': (30.145,70.039,65.863)
O2': (31.087,68.991,65.990)
N1: (30.314,72.470,66.691)
N3: (29.853,73.468,68.791)
N4: (28.823,75.495,68.885)
C6: (29.742,73.532,66.053)
C5: (29.233,74.556,66.741)
O3': (29.284,68.811,63.927)
Image (generated by PyMOL):