ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0606:0526

Extra

PDB:
ATOM 1 O3' C A 605 26.438 111.445 102.693 1.00 44.33 O
ATOM 2 P G A 606 27.829 112.036 103.254 1.00 44.53 P
ATOM 3 OP1 G A 606 28.754 110.886 103.369 1.00 43.91 O
ATOM 4 OP2 G A 606 27.542 112.865 104.451 1.00 43.52 O
ATOM 5 O5' G A 606 28.321 113.029 102.101 1.00 42.88 O
ATOM 6 C5' G A 606 28.567 112.556 100.756 1.00 40.67 C
ATOM 7 C4' G A 606 28.883 113.715 99.844 1.00 39.16 C
ATOM 8 O4' G A 606 27.709 114.547 99.694 1.00 38.90 O
ATOM 9 C3' G A 606 29.943 114.668 100.365 1.00 40.56 C
ATOM 10 O3' G A 606 31.251 114.188 100.088 1.00 44.95 O
ATOM 11 C2' G A 606 29.636 115.953 99.612 1.00 38.38 C
ATOM 12 O2' G A 606 30.211 115.997 98.322 1.00 38.11 O
ATOM 13 C1' G A 606 28.104 115.904 99.545 1.00 37.65 C
ATOM 14 N9 G A 606 27.497 116.702 100.606 1.00 35.30 N
ATOM 15 C8 G A 606 27.133 116.294 101.868 1.00 34.38 C
ATOM 16 N7 G A 606 26.722 117.278 102.626 1.00 33.53 N
ATOM 17 C5 G A 606 26.792 118.394 101.806 1.00 33.77 C
ATOM 18 C6 G A 606 26.480 119.752 102.070 1.00 34.21 C
ATOM 19 O6 G A 606 26.080 120.270 103.119 1.00 38.54 O
ATOM 20 N1 G A 606 26.679 120.543 100.955 1.00 33.29 N
ATOM 21 C2 G A 606 27.121 120.098 99.742 1.00 35.34 C
ATOM 22 N2 G A 606 27.248 121.036 98.795 1.00 38.88 N
ATOM 23 N3 G A 606 27.420 118.838 99.476 1.00 34.32 N
ATOM 24 C4 G A 606 27.237 118.048 100.547 1.00 34.36 C
ATOM 25 P U A 607 32.447 114.470 101.123 1.00 45.51 P
ATOM 26 OP1 U A 607 33.244 113.223 101.146 1.00 43.18 O
ATOM 27 OP2 U A 607 31.917 115.029 102.391 1.00 44.54 O
ATOM 28 O5' U A 607 33.315 115.601 100.410 1.00 45.44 O
TER

ATOM 1 O3' G B 525 30.319 121.656 95.454 1.00 41.28 O
ATOM 2 P C B 526 28.749 122.006 95.418 1.00 36.26 P
ATOM 3 OP1 C B 526 28.053 121.089 96.328 1.00 38.29 O
ATOM 4 OP2 C B 526 28.367 122.055 94.004 1.00 36.57 O
ATOM 5 O5' C B 526 28.660 123.489 95.990 1.00 37.53 O
ATOM 6 C5' C B 526 27.457 123.978 96.620 1.00 40.04 C
ATOM 7 C4' C B 526 27.125 125.371 96.119 1.00 42.09 C
ATOM 8 O4' C B 526 28.126 126.347 96.510 1.00 42.61 O
ATOM 9 C3' C B 526 27.013 125.526 94.618 1.00 42.72 C
ATOM 10 O3' C B 526 26.160 126.632 94.346 1.00 45.55 O
ATOM 11 C2' C B 526 28.454 125.821 94.224 1.00 41.76 C
ATOM 12 O2' C B 526 28.537 126.497 92.991 1.00 40.89 O
ATOM 13 C1' C B 526 28.942 126.685 95.397 1.00 41.94 C
ATOM 14 N1 C B 526 30.349 126.412 95.782 1.00 43.03 N
ATOM 15 C2 C B 526 31.388 126.638 94.853 1.00 41.07 C
ATOM 16 O2 C B 526 31.125 127.120 93.752 1.00 42.27 O
ATOM 17 N3 C B 526 32.652 126.325 95.190 1.00 41.17 N
ATOM 18 C4 C B 526 32.918 125.826 96.395 1.00 42.66 C
ATOM 19 N4 C B 526 34.190 125.514 96.672 1.00 41.69 N
ATOM 20 C5 C B 526 31.895 125.619 97.371 1.00 42.75 C
ATOM 21 C6 C B 526 30.641 125.920 97.026 1.00 41.69 C
ATOM 22 P G B 527 24.610 126.384 94.006 1.00 46.28 P
ATOM 23 OP1 G B 527 24.088 127.617 93.363 1.00 48.03 O
ATOM 24 OP2 G B 527 23.933 125.844 95.208 1.00 46.23 O
ATOM 25 O5' G B 527 24.652 125.239 92.910 1.00 44.44 O
TER

Atoms:
OP1: (28.754,110.886,103.369)
OP2: (27.542,112.865,104.451)
C3': (29.943,114.668,100.365)
C1': (28.104,115.904,99.545)
C5': (28.567,112.556,100.756)
O6: (26.080,120.270,103.119)
O4': (27.709,114.547,99.694)
C8: (27.133,116.294,101.868)
C2: (27.121,120.098,99.742)
C6: (26.480,119.752,102.070)
C5: (26.792,118.394,101.806)
C4: (27.237,118.048,100.547)
P: (27.829,112.036,103.254)
C4': (28.883,113.715,99.844)
C2': (29.636,115.953,99.612)
O2': (30.211,115.997,98.322)
N1: (26.679,120.543,100.955)
N2: (27.248,121.036,98.795)
N3: (27.420,118.838,99.476)
N7: (26.722,117.278,102.626)
N9: (27.497,116.702,100.606)
O5': (28.321,113.029,102.101)
O3': (31.251,114.188,100.088)
C2: (31.388,126.638,94.853)
OP1: (28.053,121.089,96.328)
OP2: (28.367,122.055,94.004)
C4: (32.918,125.826,96.395)
O5': (28.660,123.489,95.990)
C3': (27.013,125.526,94.618)
C1': (28.942,126.685,95.397)
O4': (28.126,126.347,96.510)
C5': (27.457,123.978,96.620)
P: (28.749,122.006,95.418)
O2: (31.125,127.120,93.752)
C4': (27.125,125.371,96.119)
C2': (28.454,125.821,94.224)
O2': (28.537,126.497,92.991)
N1: (30.349,126.412,95.782)
N3: (32.652,126.325,95.190)
N4: (34.190,125.514,96.672)
C6: (30.641,125.920,97.026)
C5: (31.895,125.619,97.371)
O3': (26.160,126.632,94.346)
Image (generated by PyMOL):
PyMOL image
show in jmol