Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNK:A2725:A2727
Extra
PDB:
ATOM 1 O3' A A2724 100.059 -85.496 122.404 1.00 69.38 O
ATOM 2 P G A2725 100.164 -86.262 123.810 1.00 79.83 P
ATOM 3 OP1 G A2725 98.795 -86.266 124.369 1.00 82.49 O
ATOM 4 OP2 G A2725 101.281 -85.649 124.588 1.00 70.83 O
ATOM 5 O5' G A2725 100.533 -87.768 123.422 1.00 71.59 O
ATOM 6 C5' G A2725 99.708 -88.540 122.542 1.00 66.62 C
ATOM 7 C4' G A2725 100.505 -89.692 121.959 1.00 62.32 C
ATOM 8 O4' G A2725 101.648 -89.148 121.249 1.00 66.29 O
ATOM 9 C3' G A2725 101.123 -90.637 122.975 1.00 65.46 C
ATOM 10 O3' G A2725 100.241 -91.668 123.399 1.00 71.50 O
ATOM 11 C2' G A2725 102.331 -91.183 122.230 1.00 69.09 C
ATOM 12 O2' G A2725 101.967 -92.175 121.302 1.00 73.16 O
ATOM 13 C1' G A2725 102.795 -89.954 121.465 1.00 65.62 C
ATOM 14 N9 G A2725 103.747 -89.177 122.250 1.00 65.03 N
ATOM 15 C8 G A2725 103.555 -87.909 122.737 1.00 71.15 C
ATOM 16 N7 G A2725 104.575 -87.454 123.400 1.00 72.49 N
ATOM 17 C5 G A2725 105.503 -88.480 123.348 1.00 69.04 C
ATOM 18 C6 G A2725 106.809 -88.548 123.870 1.00 73.98 C
ATOM 19 O6 G A2725 107.436 -87.677 124.488 1.00 80.68 O
ATOM 20 N1 G A2725 107.405 -89.774 123.602 1.00 74.22 N
ATOM 21 C2 G A2725 106.821 -90.797 122.907 1.00 72.85 C
ATOM 22 N2 G A2725 107.572 -91.898 122.765 1.00 67.02 N
ATOM 23 N3 G A2725 105.599 -90.742 122.394 1.00 72.15 N
ATOM 24 C4 G A2725 105.003 -89.558 122.652 1.00 67.29 C
ATOM 25 P A A2726 100.616 -92.544 124.704 1.00 74.63 P
ATOM 26 OP1 A A2726 99.457 -93.450 124.913 1.00 77.25 O
ATOM 27 OP2 A A2726 101.089 -91.660 125.817 1.00 62.42 O
ATOM 28 O5' A A2726 101.855 -93.433 124.241 1.00 70.01 O
TER
ATOM 1 O3' A B2726 105.159 -94.900 122.907 1.00 63.18 O
ATOM 2 P C B2727 105.316 -94.563 121.356 1.00 66.42 P
ATOM 3 OP1 C B2727 106.718 -94.126 121.157 1.00 68.92 O
ATOM 4 OP2 C B2727 104.201 -93.646 121.034 1.00 69.52 O
ATOM 5 O5' C B2727 105.047 -95.940 120.591 1.00 70.29 O
ATOM 6 C5' C B2727 106.053 -96.940 120.480 1.00 68.56 C
ATOM 7 C4' C B2727 105.575 -98.076 119.608 1.00 75.15 C
ATOM 8 O4' C B2727 104.346 -98.625 120.156 1.00 73.09 O
ATOM 9 C3' C B2727 105.183 -97.716 118.184 1.00 79.58 C
ATOM 10 O3' C B2727 106.289 -97.572 117.316 1.00 84.71 O
ATOM 11 C2' C B2727 104.244 -98.852 117.789 1.00 80.01 C
ATOM 12 O2' C B2727 104.851-100.074 117.384 1.00 78.95 O
ATOM 13 C1' C B2727 103.503 -99.076 119.097 1.00 75.99 C
ATOM 14 N1 C B2727 102.249 -98.296 119.098 1.00 82.91 N
ATOM 15 C2 C B2727 101.130 -98.802 118.386 1.00 82.06 C
ATOM 16 O2 C B2727 101.235 -99.886 117.759 1.00 77.26 O
ATOM 17 N3 C B2727 99.973 -98.098 118.406 1.00 77.21 N
ATOM 18 C4 C B2727 99.892 -96.959 119.100 1.00 76.24 C
ATOM 19 N4 C B2727 98.717 -96.333 119.135 1.00 83.09 N
ATOM 20 C5 C B2727 101.013 -96.419 119.802 1.00 74.44 C
ATOM 21 C6 C B2727 102.157 -97.108 119.773 1.00 76.33 C
ATOM 22 P C B2728 106.425 -96.228 116.453 1.00 76.89 P
ATOM 23 OP1 C B2728 107.565 -96.389 115.504 1.00 80.31 O
ATOM 24 OP2 C B2728 106.437 -95.125 117.437 1.00 70.32 O
ATOM 25 O5' C B2728 105.053 -96.127 115.648 1.00 81.69 O
TER
ATOM 2 P G A2725 100.164 -86.262 123.810 1.00 79.83 P
ATOM 3 OP1 G A2725 98.795 -86.266 124.369 1.00 82.49 O
ATOM 4 OP2 G A2725 101.281 -85.649 124.588 1.00 70.83 O
ATOM 5 O5' G A2725 100.533 -87.768 123.422 1.00 71.59 O
ATOM 6 C5' G A2725 99.708 -88.540 122.542 1.00 66.62 C
ATOM 7 C4' G A2725 100.505 -89.692 121.959 1.00 62.32 C
ATOM 8 O4' G A2725 101.648 -89.148 121.249 1.00 66.29 O
ATOM 9 C3' G A2725 101.123 -90.637 122.975 1.00 65.46 C
ATOM 10 O3' G A2725 100.241 -91.668 123.399 1.00 71.50 O
ATOM 11 C2' G A2725 102.331 -91.183 122.230 1.00 69.09 C
ATOM 12 O2' G A2725 101.967 -92.175 121.302 1.00 73.16 O
ATOM 13 C1' G A2725 102.795 -89.954 121.465 1.00 65.62 C
ATOM 14 N9 G A2725 103.747 -89.177 122.250 1.00 65.03 N
ATOM 15 C8 G A2725 103.555 -87.909 122.737 1.00 71.15 C
ATOM 16 N7 G A2725 104.575 -87.454 123.400 1.00 72.49 N
ATOM 17 C5 G A2725 105.503 -88.480 123.348 1.00 69.04 C
ATOM 18 C6 G A2725 106.809 -88.548 123.870 1.00 73.98 C
ATOM 19 O6 G A2725 107.436 -87.677 124.488 1.00 80.68 O
ATOM 20 N1 G A2725 107.405 -89.774 123.602 1.00 74.22 N
ATOM 21 C2 G A2725 106.821 -90.797 122.907 1.00 72.85 C
ATOM 22 N2 G A2725 107.572 -91.898 122.765 1.00 67.02 N
ATOM 23 N3 G A2725 105.599 -90.742 122.394 1.00 72.15 N
ATOM 24 C4 G A2725 105.003 -89.558 122.652 1.00 67.29 C
ATOM 25 P A A2726 100.616 -92.544 124.704 1.00 74.63 P
ATOM 26 OP1 A A2726 99.457 -93.450 124.913 1.00 77.25 O
ATOM 27 OP2 A A2726 101.089 -91.660 125.817 1.00 62.42 O
ATOM 28 O5' A A2726 101.855 -93.433 124.241 1.00 70.01 O
TER
ATOM 1 O3' A B2726 105.159 -94.900 122.907 1.00 63.18 O
ATOM 2 P C B2727 105.316 -94.563 121.356 1.00 66.42 P
ATOM 3 OP1 C B2727 106.718 -94.126 121.157 1.00 68.92 O
ATOM 4 OP2 C B2727 104.201 -93.646 121.034 1.00 69.52 O
ATOM 5 O5' C B2727 105.047 -95.940 120.591 1.00 70.29 O
ATOM 6 C5' C B2727 106.053 -96.940 120.480 1.00 68.56 C
ATOM 7 C4' C B2727 105.575 -98.076 119.608 1.00 75.15 C
ATOM 8 O4' C B2727 104.346 -98.625 120.156 1.00 73.09 O
ATOM 9 C3' C B2727 105.183 -97.716 118.184 1.00 79.58 C
ATOM 10 O3' C B2727 106.289 -97.572 117.316 1.00 84.71 O
ATOM 11 C2' C B2727 104.244 -98.852 117.789 1.00 80.01 C
ATOM 12 O2' C B2727 104.851-100.074 117.384 1.00 78.95 O
ATOM 13 C1' C B2727 103.503 -99.076 119.097 1.00 75.99 C
ATOM 14 N1 C B2727 102.249 -98.296 119.098 1.00 82.91 N
ATOM 15 C2 C B2727 101.130 -98.802 118.386 1.00 82.06 C
ATOM 16 O2 C B2727 101.235 -99.886 117.759 1.00 77.26 O
ATOM 17 N3 C B2727 99.973 -98.098 118.406 1.00 77.21 N
ATOM 18 C4 C B2727 99.892 -96.959 119.100 1.00 76.24 C
ATOM 19 N4 C B2727 98.717 -96.333 119.135 1.00 83.09 N
ATOM 20 C5 C B2727 101.013 -96.419 119.802 1.00 74.44 C
ATOM 21 C6 C B2727 102.157 -97.108 119.773 1.00 76.33 C
ATOM 22 P C B2728 106.425 -96.228 116.453 1.00 76.89 P
ATOM 23 OP1 C B2728 107.565 -96.389 115.504 1.00 80.31 O
ATOM 24 OP2 C B2728 106.437 -95.125 117.437 1.00 70.32 O
ATOM 25 O5' C B2728 105.053 -96.127 115.648 1.00 81.69 O
TER
Atoms:
OP1: (98.795,-86.266,124.369)
OP2: (101.281,-85.649,124.588)
C3': (101.123,-90.637,122.975)
C1': (102.795,-89.954,121.465)
C5': (99.708,-88.540,122.542)
O6: (107.436,-87.677,124.488)
O4': (101.648,-89.148,121.249)
C8: (103.555,-87.909,122.737)
C2: (106.821,-90.797,122.907)
C6: (106.809,-88.548,123.870)
C5: (105.503,-88.480,123.348)
C4: (105.003,-89.558,122.652)
P: (100.164,-86.262,123.810)
C4': (100.505,-89.692,121.959)
C2': (102.331,-91.183,122.230)
O2': (101.967,-92.175,121.302)
N1: (107.405,-89.774,123.602)
N2: (107.572,-91.898,122.765)
N3: (105.599,-90.742,122.394)
N7: (104.575,-87.454,123.400)
N9: (103.747,-89.177,122.250)
O5': (100.533,-87.768,123.422)
O3': (100.241,-91.668,123.399)
OP2: (101.281,-85.649,124.588)
C3': (101.123,-90.637,122.975)
C1': (102.795,-89.954,121.465)
C5': (99.708,-88.540,122.542)
O6: (107.436,-87.677,124.488)
O4': (101.648,-89.148,121.249)
C8: (103.555,-87.909,122.737)
C2: (106.821,-90.797,122.907)
C6: (106.809,-88.548,123.870)
C5: (105.503,-88.480,123.348)
C4: (105.003,-89.558,122.652)
P: (100.164,-86.262,123.810)
C4': (100.505,-89.692,121.959)
C2': (102.331,-91.183,122.230)
O2': (101.967,-92.175,121.302)
N1: (107.405,-89.774,123.602)
N2: (107.572,-91.898,122.765)
N3: (105.599,-90.742,122.394)
N7: (104.575,-87.454,123.400)
N9: (103.747,-89.177,122.250)
O5': (100.533,-87.768,123.422)
O3': (100.241,-91.668,123.399)
C2: (101.130,-98.802,118.386)
OP1: (106.718,-94.126,121.157)
OP2: (104.201,-93.646,121.034)
C4: (99.892,-96.959,119.100)
O5': (105.047,-95.940,120.591)
C3': (105.183,-97.716,118.184)
C1': (103.503,-99.076,119.097)
O4': (104.346,-98.625,120.156)
C5': (106.053,-96.940,120.480)
P: (105.316,-94.563,121.356)
O2: (101.235,-99.886,117.759)
C4': (105.575,-98.076,119.608)
C2': (104.244,-98.852,117.789)
O2': (104.851,-100.074,117.384)
N1: (102.249,-98.296,119.098)
N3: (99.973,-98.098,118.406)
N4: (98.717,-96.333,119.135)
C6: (102.157,-97.108,119.773)
C5: (101.013,-96.419,119.802)
O3': (106.289,-97.572,117.316)
OP1: (106.718,-94.126,121.157)
OP2: (104.201,-93.646,121.034)
C4: (99.892,-96.959,119.100)
O5': (105.047,-95.940,120.591)
C3': (105.183,-97.716,118.184)
C1': (103.503,-99.076,119.097)
O4': (104.346,-98.625,120.156)
C5': (106.053,-96.940,120.480)
P: (105.316,-94.563,121.356)
O2: (101.235,-99.886,117.759)
C4': (105.575,-98.076,119.608)
C2': (104.244,-98.852,117.789)
O2': (104.851,-100.074,117.384)
N1: (102.249,-98.296,119.098)
N3: (99.973,-98.098,118.406)
N4: (98.717,-96.333,119.135)
C6: (102.157,-97.108,119.773)
C5: (101.013,-96.419,119.802)
O3': (106.289,-97.572,117.316)
Image (generated by PyMOL):