Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2498:A2499
Extra
PDB:
ATOM 1 O3' U A2497 -72.299 -64.312 -0.085 1.00 0.01 O
ATOM 2 P G A2498 -71.741 -62.951 0.535 1.00 0.01 P
ATOM 3 OP1 G A2498 -70.347 -62.819 0.120 1.00 0.01 O
ATOM 4 OP2 G A2498 -72.059 -62.949 1.966 1.00 0.01 O
ATOM 5 O5' G A2498 -72.636 -61.883 -0.181 1.00 0.01 O
ATOM 6 C5' G A2498 -72.348 -61.449 -1.487 1.00 0.01 C
ATOM 7 C4' G A2498 -72.317 -59.954 -1.539 1.00 0.01 C
ATOM 8 O4' G A2498 -71.028 -59.475 -1.100 1.00 0.01 O
ATOM 9 C3' G A2498 -72.496 -59.318 -2.893 1.00 0.01 C
ATOM 10 O3' G A2498 -73.858 -59.331 -3.318 1.00 0.01 O
ATOM 11 C2' G A2498 -71.943 -57.935 -2.615 1.00 0.01 C
ATOM 12 O2' G A2498 -72.859 -57.189 -1.836 1.00 0.01 O
ATOM 13 C1' G A2498 -70.746 -58.273 -1.725 1.00 0.01 C
ATOM 14 N9 G A2498 -69.495 -58.429 -2.480 1.00 0.01 N
ATOM 15 C8 G A2498 -68.888 -59.511 -3.055 1.00 0.01 C
ATOM 16 N7 G A2498 -67.731 -59.215 -3.624 1.00 0.01 N
ATOM 17 C5 G A2498 -67.585 -57.865 -3.399 1.00 0.01 C
ATOM 18 C6 G A2498 -66.570 -56.960 -3.743 1.00 0.01 C
ATOM 19 O6 G A2498 -65.508 -57.145 -4.366 1.00 0.01 O
ATOM 20 N1 G A2498 -66.879 -55.686 -3.281 1.00 0.01 N
ATOM 21 C2 G A2498 -67.990 -55.331 -2.574 1.00 0.01 C
ATOM 22 N2 G A2498 -68.128 -54.062 -2.196 1.00 0.01 N
ATOM 23 N3 G A2498 -68.926 -56.158 -2.241 1.00 0.01 N
ATOM 24 C4 G A2498 -68.653 -57.387 -2.689 1.00 0.01 C
ATOM 25 P U A2499 -74.278 -58.989 -4.840 1.00 7.17 P
ATOM 26 OP1 U A2499 -75.536 -59.726 -5.110 1.00 7.17 O
ATOM 27 OP2 U A2499 -73.103 -59.248 -5.710 1.00 7.17 O
ATOM 28 O5' U A2499 -74.590 -57.433 -4.769 1.00 7.17 O
TER
ATOM 1 O3' G B2498 -73.858 -59.331 -3.318 1.00 0.01 O
ATOM 2 P U B2499 -74.278 -58.989 -4.840 1.00 7.17 P
ATOM 3 OP1 U B2499 -75.536 -59.726 -5.110 1.00 7.17 O
ATOM 4 OP2 U B2499 -73.103 -59.248 -5.710 1.00 7.17 O
ATOM 5 O5' U B2499 -74.590 -57.433 -4.769 1.00 7.17 O
ATOM 6 C5' U B2499 -75.733 -56.995 -4.077 1.00 7.17 C
ATOM 7 C4' U B2499 -76.145 -55.602 -4.460 1.00 7.17 C
ATOM 8 O4' U B2499 -75.591 -54.653 -3.516 1.00 7.17 O
ATOM 9 C3' U B2499 -75.671 -55.060 -5.805 1.00 7.17 C
ATOM 10 O3' U B2499 -76.389 -55.545 -6.931 1.00 7.17 O
ATOM 11 C2' U B2499 -75.890 -53.590 -5.589 1.00 7.17 C
ATOM 12 O2' U B2499 -77.282 -53.324 -5.559 1.00 7.17 O
ATOM 13 C1' U B2499 -75.357 -53.427 -4.179 1.00 7.17 C
ATOM 14 N1 U B2499 -73.882 -53.104 -4.176 1.00 7.71 N
ATOM 15 C2 U B2499 -73.520 -51.787 -4.527 1.00 7.71 C
ATOM 16 O2 U B2499 -74.284 -50.887 -4.807 1.00 7.71 O
ATOM 17 N3 U B2499 -72.192 -51.502 -4.545 1.00 7.71 N
ATOM 18 C4 U B2499 -71.153 -52.352 -4.250 1.00 7.71 C
ATOM 19 O4 U B2499 -70.008 -51.872 -4.316 1.00 7.71 O
ATOM 20 C5 U B2499 -71.550 -53.700 -3.898 1.00 7.71 C
ATOM 21 C6 U B2499 -72.866 -54.022 -3.883 1.00 7.71 C
ATOM 22 P C B2500 -75.882 -55.165 -8.416 1.00 0.01 P
ATOM 23 OP1 C B2500 -75.931 -56.387 -9.208 1.00 0.01 O
ATOM 24 OP2 C B2500 -74.591 -54.502 -8.261 1.00 0.01 O
ATOM 25 O5' C B2500 -76.959 -54.115 -8.957 1.00 0.01 O
TER
ATOM 2 P G A2498 -71.741 -62.951 0.535 1.00 0.01 P
ATOM 3 OP1 G A2498 -70.347 -62.819 0.120 1.00 0.01 O
ATOM 4 OP2 G A2498 -72.059 -62.949 1.966 1.00 0.01 O
ATOM 5 O5' G A2498 -72.636 -61.883 -0.181 1.00 0.01 O
ATOM 6 C5' G A2498 -72.348 -61.449 -1.487 1.00 0.01 C
ATOM 7 C4' G A2498 -72.317 -59.954 -1.539 1.00 0.01 C
ATOM 8 O4' G A2498 -71.028 -59.475 -1.100 1.00 0.01 O
ATOM 9 C3' G A2498 -72.496 -59.318 -2.893 1.00 0.01 C
ATOM 10 O3' G A2498 -73.858 -59.331 -3.318 1.00 0.01 O
ATOM 11 C2' G A2498 -71.943 -57.935 -2.615 1.00 0.01 C
ATOM 12 O2' G A2498 -72.859 -57.189 -1.836 1.00 0.01 O
ATOM 13 C1' G A2498 -70.746 -58.273 -1.725 1.00 0.01 C
ATOM 14 N9 G A2498 -69.495 -58.429 -2.480 1.00 0.01 N
ATOM 15 C8 G A2498 -68.888 -59.511 -3.055 1.00 0.01 C
ATOM 16 N7 G A2498 -67.731 -59.215 -3.624 1.00 0.01 N
ATOM 17 C5 G A2498 -67.585 -57.865 -3.399 1.00 0.01 C
ATOM 18 C6 G A2498 -66.570 -56.960 -3.743 1.00 0.01 C
ATOM 19 O6 G A2498 -65.508 -57.145 -4.366 1.00 0.01 O
ATOM 20 N1 G A2498 -66.879 -55.686 -3.281 1.00 0.01 N
ATOM 21 C2 G A2498 -67.990 -55.331 -2.574 1.00 0.01 C
ATOM 22 N2 G A2498 -68.128 -54.062 -2.196 1.00 0.01 N
ATOM 23 N3 G A2498 -68.926 -56.158 -2.241 1.00 0.01 N
ATOM 24 C4 G A2498 -68.653 -57.387 -2.689 1.00 0.01 C
ATOM 25 P U A2499 -74.278 -58.989 -4.840 1.00 7.17 P
ATOM 26 OP1 U A2499 -75.536 -59.726 -5.110 1.00 7.17 O
ATOM 27 OP2 U A2499 -73.103 -59.248 -5.710 1.00 7.17 O
ATOM 28 O5' U A2499 -74.590 -57.433 -4.769 1.00 7.17 O
TER
ATOM 1 O3' G B2498 -73.858 -59.331 -3.318 1.00 0.01 O
ATOM 2 P U B2499 -74.278 -58.989 -4.840 1.00 7.17 P
ATOM 3 OP1 U B2499 -75.536 -59.726 -5.110 1.00 7.17 O
ATOM 4 OP2 U B2499 -73.103 -59.248 -5.710 1.00 7.17 O
ATOM 5 O5' U B2499 -74.590 -57.433 -4.769 1.00 7.17 O
ATOM 6 C5' U B2499 -75.733 -56.995 -4.077 1.00 7.17 C
ATOM 7 C4' U B2499 -76.145 -55.602 -4.460 1.00 7.17 C
ATOM 8 O4' U B2499 -75.591 -54.653 -3.516 1.00 7.17 O
ATOM 9 C3' U B2499 -75.671 -55.060 -5.805 1.00 7.17 C
ATOM 10 O3' U B2499 -76.389 -55.545 -6.931 1.00 7.17 O
ATOM 11 C2' U B2499 -75.890 -53.590 -5.589 1.00 7.17 C
ATOM 12 O2' U B2499 -77.282 -53.324 -5.559 1.00 7.17 O
ATOM 13 C1' U B2499 -75.357 -53.427 -4.179 1.00 7.17 C
ATOM 14 N1 U B2499 -73.882 -53.104 -4.176 1.00 7.71 N
ATOM 15 C2 U B2499 -73.520 -51.787 -4.527 1.00 7.71 C
ATOM 16 O2 U B2499 -74.284 -50.887 -4.807 1.00 7.71 O
ATOM 17 N3 U B2499 -72.192 -51.502 -4.545 1.00 7.71 N
ATOM 18 C4 U B2499 -71.153 -52.352 -4.250 1.00 7.71 C
ATOM 19 O4 U B2499 -70.008 -51.872 -4.316 1.00 7.71 O
ATOM 20 C5 U B2499 -71.550 -53.700 -3.898 1.00 7.71 C
ATOM 21 C6 U B2499 -72.866 -54.022 -3.883 1.00 7.71 C
ATOM 22 P C B2500 -75.882 -55.165 -8.416 1.00 0.01 P
ATOM 23 OP1 C B2500 -75.931 -56.387 -9.208 1.00 0.01 O
ATOM 24 OP2 C B2500 -74.591 -54.502 -8.261 1.00 0.01 O
ATOM 25 O5' C B2500 -76.959 -54.115 -8.957 1.00 0.01 O
TER
Atoms:
OP1: (-70.347,-62.819,0.120)
OP2: (-72.059,-62.949,1.966)
C3': (-72.496,-59.318,-2.893)
C1': (-70.746,-58.273,-1.725)
C5': (-72.348,-61.449,-1.487)
O6: (-65.508,-57.145,-4.366)
O4': (-71.028,-59.475,-1.100)
C8: (-68.888,-59.511,-3.055)
C2: (-67.990,-55.331,-2.574)
C6: (-66.570,-56.960,-3.743)
C5: (-67.585,-57.865,-3.399)
C4: (-68.653,-57.387,-2.689)
P: (-71.741,-62.951,0.535)
C4': (-72.317,-59.954,-1.539)
C2': (-71.943,-57.935,-2.615)
O2': (-72.859,-57.189,-1.836)
N1: (-66.879,-55.686,-3.281)
N2: (-68.128,-54.062,-2.196)
N3: (-68.926,-56.158,-2.241)
N7: (-67.731,-59.215,-3.624)
N9: (-69.495,-58.429,-2.480)
O5': (-72.636,-61.883,-0.181)
O3': (-73.858,-59.331,-3.318)
OP2: (-72.059,-62.949,1.966)
C3': (-72.496,-59.318,-2.893)
C1': (-70.746,-58.273,-1.725)
C5': (-72.348,-61.449,-1.487)
O6: (-65.508,-57.145,-4.366)
O4': (-71.028,-59.475,-1.100)
C8: (-68.888,-59.511,-3.055)
C2: (-67.990,-55.331,-2.574)
C6: (-66.570,-56.960,-3.743)
C5: (-67.585,-57.865,-3.399)
C4: (-68.653,-57.387,-2.689)
P: (-71.741,-62.951,0.535)
C4': (-72.317,-59.954,-1.539)
C2': (-71.943,-57.935,-2.615)
O2': (-72.859,-57.189,-1.836)
N1: (-66.879,-55.686,-3.281)
N2: (-68.128,-54.062,-2.196)
N3: (-68.926,-56.158,-2.241)
N7: (-67.731,-59.215,-3.624)
N9: (-69.495,-58.429,-2.480)
O5': (-72.636,-61.883,-0.181)
O3': (-73.858,-59.331,-3.318)
C4: (-71.153,-52.352,-4.250)
N3: (-72.192,-51.502,-4.545)
OP1: (-75.536,-59.726,-5.110)
OP2: (-73.103,-59.248,-5.710)
C2: (-73.520,-51.787,-4.527)
C1': (-75.357,-53.427,-4.179)
C3': (-75.671,-55.060,-5.805)
O5': (-74.590,-57.433,-4.769)
O4': (-75.591,-54.653,-3.516)
C5': (-75.733,-56.995,-4.077)
P: (-74.278,-58.989,-4.840)
C4': (-76.145,-55.602,-4.460)
C2': (-75.890,-53.590,-5.589)
O2': (-77.282,-53.324,-5.559)
N1: (-73.882,-53.104,-4.176)
O4: (-70.008,-51.872,-4.316)
O2: (-74.284,-50.887,-4.807)
C6: (-72.866,-54.022,-3.883)
C5: (-71.550,-53.700,-3.898)
O3': (-76.389,-55.545,-6.931)
N3: (-72.192,-51.502,-4.545)
OP1: (-75.536,-59.726,-5.110)
OP2: (-73.103,-59.248,-5.710)
C2: (-73.520,-51.787,-4.527)
C1': (-75.357,-53.427,-4.179)
C3': (-75.671,-55.060,-5.805)
O5': (-74.590,-57.433,-4.769)
O4': (-75.591,-54.653,-3.516)
C5': (-75.733,-56.995,-4.077)
P: (-74.278,-58.989,-4.840)
C4': (-76.145,-55.602,-4.460)
C2': (-75.890,-53.590,-5.589)
O2': (-77.282,-53.324,-5.559)
N1: (-73.882,-53.104,-4.176)
O4: (-70.008,-51.872,-4.316)
O2: (-74.284,-50.887,-4.807)
C6: (-72.866,-54.022,-3.883)
C5: (-71.550,-53.700,-3.898)
O3': (-76.389,-55.545,-6.931)
Image (generated by PyMOL):