ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8N:A364:A365

Extra

PDB:
ATOM 1 O3' U A 363 -76.171 2.520 -69.923 1.00 11.84 O
ATOM 2 P A A 364 -76.531 1.023 -70.290 1.00 13.69 P
ATOM 3 OP1 A A 364 -77.474 0.542 -69.229 1.00 13.69 O
ATOM 4 OP2 A A 364 -75.231 0.301 -70.495 1.00 13.69 O
ATOM 5 O5' A A 364 -77.300 1.167 -71.684 1.00 13.69 O
ATOM 6 C5' A A 364 -78.428 2.035 -71.831 1.00 13.69 C
ATOM 7 C4' A A 364 -78.522 2.575 -73.239 1.00 13.69 C
ATOM 8 O4' A A 364 -77.753 3.811 -73.328 1.00 13.69 O
ATOM 9 C3' A A 364 -77.947 1.649 -74.301 1.00 13.69 C
ATOM 10 O3' A A 364 -78.639 1.832 -75.533 1.00 13.69 O
ATOM 11 C2' A A 364 -76.509 2.140 -74.420 1.00 13.69 C
ATOM 12 O2' A A 364 -75.855 1.812 -75.625 1.00 13.69 O
ATOM 13 C1' A A 364 -76.689 3.646 -74.255 1.00 13.69 C
ATOM 14 N9 A A 364 -75.501 4.318 -73.726 1.00 13.85 N
ATOM 15 C8 A A 364 -75.142 4.485 -72.414 1.00 13.85 C
ATOM 16 N7 A A 364 -73.996 5.101 -72.270 1.00 13.85 N
ATOM 17 C5 A A 364 -73.576 5.347 -73.566 1.00 13.85 C
ATOM 18 C6 A A 364 -72.426 5.969 -74.077 1.00 13.85 C
ATOM 19 N6 A A 364 -71.465 6.469 -73.300 1.00 13.85 N
ATOM 20 N1 A A 364 -72.290 6.071 -75.420 1.00 13.85 N
ATOM 21 C2 A A 364 -73.270 5.543 -76.179 1.00 13.85 C
ATOM 22 N3 A A 364 -74.397 4.923 -75.803 1.00 13.85 N
ATOM 23 C4 A A 364 -74.491 4.866 -74.469 1.00 13.85 C
ATOM 24 P U A 365 -79.284 0.559 -76.293 1.00 27.81 P
ATOM 25 OP1 U A 365 -80.595 1.002 -76.845 1.00 27.81 O
ATOM 26 OP2 U A 365 -79.266 -0.586 -75.340 1.00 27.81 O
ATOM 27 O5' U A 365 -78.252 0.292 -77.491 1.00 27.81 O
TER

ATOM 1 O3' A B 364 -78.639 1.832 -75.533 1.00 13.69 O
ATOM 2 P U B 365 -79.284 0.559 -76.293 1.00 27.81 P
ATOM 3 OP1 U B 365 -80.595 1.002 -76.845 1.00 27.81 O
ATOM 4 OP2 U B 365 -79.266 -0.586 -75.340 1.00 27.81 O
ATOM 5 O5' U B 365 -78.252 0.292 -77.491 1.00 27.81 O
ATOM 6 C5' U B 365 -77.598 -0.966 -77.639 1.00 27.81 C
ATOM 7 C4' U B 365 -77.295 -1.286 -79.088 1.00 27.81 C
ATOM 8 O4' U B 365 -76.632 -0.152 -79.706 1.00 27.81 O
ATOM 9 C3' U B 365 -76.360 -2.470 -79.298 1.00 27.81 C
ATOM 10 O3' U B 365 -76.653 -3.109 -80.535 1.00 27.81 O
ATOM 11 C2' U B 365 -75.008 -1.803 -79.392 1.00 27.81 C
ATOM 12 O2' U B 365 -74.025 -2.572 -80.043 1.00 27.81 O
ATOM 13 C1' U B 365 -75.358 -0.550 -80.173 1.00 27.81 C
ATOM 14 N1 U B 365 -74.427 0.551 -79.954 1.00 27.52 N
ATOM 15 C2 U B 365 -74.145 1.395 -81.014 1.00 27.52 C
ATOM 16 O2 U B 365 -74.641 1.278 -82.125 1.00 27.52 O
ATOM 17 N3 U B 365 -73.260 2.404 -80.726 1.00 27.52 N
ATOM 18 C4 U B 365 -72.644 2.630 -79.513 1.00 27.52 C
ATOM 19 O4 U B 365 -71.865 3.577 -79.396 1.00 27.52 O
ATOM 20 C5 U B 365 -72.983 1.694 -78.480 1.00 27.52 C
ATOM 21 C6 U B 365 -73.843 0.704 -78.729 1.00 27.52 C
ATOM 22 P U B 366 -77.137 -4.632 -80.539 1.00 17.00 P
ATOM 23 OP1 U B 366 -77.892 -4.859 -81.800 1.00 17.00 O
ATOM 24 OP2 U B 366 -77.823 -4.850 -79.250 1.00 17.00 O
ATOM 25 O5' U B 366 -75.763 -5.446 -80.567 1.00 17.00 O
TER

Atoms:
OP1: (-77.474,0.542,-69.229)
OP2: (-75.231,0.301,-70.495)
C3': (-77.947,1.649,-74.301)
C1': (-76.689,3.646,-74.255)
C5': (-78.428,2.035,-71.831)
O4': (-77.753,3.811,-73.328)
C8: (-75.142,4.485,-72.414)
O2': (-75.855,1.812,-75.625)
C6: (-72.426,5.969,-74.077)
C5: (-73.576,5.347,-73.566)
C4: (-74.491,4.866,-74.469)
P: (-76.531,1.023,-70.290)
C4': (-78.522,2.575,-73.239)
C2': (-76.509,2.140,-74.420)
C2: (-73.270,5.543,-76.179)
N1: (-72.290,6.071,-75.420)
N3: (-74.397,4.923,-75.803)
N6: (-71.465,6.469,-73.300)
N7: (-73.996,5.101,-72.270)
N9: (-75.501,4.318,-73.726)
O5': (-77.300,1.167,-71.684)
O3': (-78.639,1.832,-75.533)
C4: (-72.644,2.630,-79.513)
N3: (-73.260,2.404,-80.726)
OP1: (-80.595,1.002,-76.845)
OP2: (-79.266,-0.586,-75.340)
C2: (-74.145,1.395,-81.014)
C1': (-75.358,-0.550,-80.173)
C3': (-76.360,-2.470,-79.298)
O5': (-78.252,0.292,-77.491)
O4': (-76.632,-0.152,-79.706)
C5': (-77.598,-0.966,-77.639)
P: (-79.284,0.559,-76.293)
C4': (-77.295,-1.286,-79.088)
C2': (-75.008,-1.803,-79.392)
O2': (-74.025,-2.572,-80.043)
N1: (-74.427,0.551,-79.954)
O4: (-71.865,3.577,-79.396)
O2: (-74.641,1.278,-82.125)
C6: (-73.843,0.704,-78.729)
C5: (-72.983,1.694,-78.480)
O3': (-76.653,-3.109,-80.535)
Image (generated by PyMOL):
PyMOL image
show in jmol