Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11153:11133
Extra
PDB:
ATOM 1 O3' U A1152 22.910 6.708 0.379 1.00 67.42 O
ATOM 2 P G A1153 23.991 6.702 1.531 1.00 56.55 P
ATOM 3 OP1 G A1153 24.029 5.294 2.049 1.00 56.22 O
ATOM 4 OP2 G A1153 23.625 7.834 2.469 1.00 56.31 O
ATOM 5 O5' G A1153 25.351 7.050 0.756 1.00 56.72 O
ATOM 6 C5' G A1153 25.731 8.401 0.579 1.00 56.86 C
ATOM 7 C4' G A1153 27.008 8.732 1.299 1.00 56.43 C
ATOM 8 O4' G A1153 26.958 8.293 2.677 1.00 55.83 O
ATOM 9 C3' G A1153 28.251 8.067 0.768 1.00 56.43 C
ATOM 10 O3' G A1153 28.706 8.669 -0.410 1.00 56.92 O
ATOM 11 C2' G A1153 29.206 8.201 1.940 1.00 55.85 C
ATOM 12 O2' G A1153 29.618 9.539 2.068 1.00 55.88 O
ATOM 13 C1' G A1153 28.268 7.922 3.100 1.00 55.47 C
ATOM 14 N9 G A1153 28.265 6.502 3.485 1.00 55.20 N
ATOM 15 C8 G A1153 27.168 5.712 3.409 1.00 55.30 C
ATOM 16 N7 G A1153 27.386 4.503 3.816 1.00 55.02 N
ATOM 17 C5 G A1153 28.713 4.465 4.197 1.00 54.72 C
ATOM 18 C6 G A1153 29.495 3.399 4.713 1.00 54.36 C
ATOM 19 O6 G A1153 29.213 2.241 4.963 1.00 54.23 O
ATOM 20 N1 G A1153 30.774 3.794 4.958 1.00 54.15 N
ATOM 21 C2 G A1153 31.248 5.043 4.730 1.00 54.27 C
ATOM 22 N2 G A1153 32.531 5.223 5.029 1.00 54.04 N
ATOM 23 N3 G A1153 30.532 6.051 4.255 1.00 54.61 N
ATOM 24 C4 G A1153 29.263 5.707 3.999 1.00 54.82 C
ATOM 25 P U A1154 28.658 7.846 -1.776 1.00 50.90 P
ATOM 26 OP1 U A1154 28.745 8.837 -2.891 1.00 51.46 O
ATOM 27 OP2 U A1154 27.476 6.938 -1.709 1.00 50.94 O
ATOM 28 O5' U A1154 30.011 6.983 -1.709 1.00 50.64 O
TER
ATOM 1 O3' U B1132 35.401 6.743 5.724 1.00 43.78 O
ATOM 2 P C B1133 35.057 8.148 4.993 1.00 54.38 P
ATOM 3 OP1 C B1133 33.595 8.204 4.786 1.00 54.59 O
ATOM 4 OP2 C B1133 35.944 8.257 3.816 1.00 54.77 O
ATOM 5 O5' C B1133 35.486 9.203 6.083 1.00 54.03 O
ATOM 6 C5' C B1133 34.726 9.421 7.259 1.00 53.67 C
ATOM 7 C4' C B1133 34.735 10.877 7.608 1.00 53.69 C
ATOM 8 O4' C B1133 36.070 11.231 8.052 1.00 53.46 O
ATOM 9 C3' C B1133 34.434 11.793 6.417 1.00 54.26 C
ATOM 10 O3' C B1133 33.811 12.992 6.859 1.00 54.29 O
ATOM 11 C2' C B1133 35.811 12.113 5.890 1.00 54.37 C
ATOM 12 O2' C B1133 35.879 13.292 5.139 1.00 54.79 O
ATOM 13 C1' C B1133 36.624 12.203 7.180 1.00 53.84 C
ATOM 14 N1 C B1133 38.042 11.896 6.983 1.00 53.77 N
ATOM 15 C2 C B1133 39.012 12.844 7.278 1.00 53.70 C
ATOM 16 O2 C B1133 38.614 13.905 7.782 1.00 53.68 O
ATOM 17 N3 C B1133 40.339 12.608 7.052 1.00 53.67 N
ATOM 18 C4 C B1133 40.694 11.441 6.531 1.00 53.71 C
ATOM 19 N4 C B1133 41.991 11.195 6.306 1.00 53.70 N
ATOM 20 C5 C B1133 39.708 10.463 6.196 1.00 53.80 C
ATOM 21 C6 C B1133 38.418 10.725 6.429 1.00 53.82 C
ATOM 22 P A B1134 32.212 13.034 7.105 1.00 56.23 P
ATOM 23 OP1 A B1134 31.590 11.919 6.301 1.00 56.46 O
ATOM 24 OP2 A B1134 31.763 14.479 6.850 1.00 56.55 O
ATOM 25 O5' A B1134 32.111 12.683 8.674 1.00 55.63 O
TER
ATOM 2 P G A1153 23.991 6.702 1.531 1.00 56.55 P
ATOM 3 OP1 G A1153 24.029 5.294 2.049 1.00 56.22 O
ATOM 4 OP2 G A1153 23.625 7.834 2.469 1.00 56.31 O
ATOM 5 O5' G A1153 25.351 7.050 0.756 1.00 56.72 O
ATOM 6 C5' G A1153 25.731 8.401 0.579 1.00 56.86 C
ATOM 7 C4' G A1153 27.008 8.732 1.299 1.00 56.43 C
ATOM 8 O4' G A1153 26.958 8.293 2.677 1.00 55.83 O
ATOM 9 C3' G A1153 28.251 8.067 0.768 1.00 56.43 C
ATOM 10 O3' G A1153 28.706 8.669 -0.410 1.00 56.92 O
ATOM 11 C2' G A1153 29.206 8.201 1.940 1.00 55.85 C
ATOM 12 O2' G A1153 29.618 9.539 2.068 1.00 55.88 O
ATOM 13 C1' G A1153 28.268 7.922 3.100 1.00 55.47 C
ATOM 14 N9 G A1153 28.265 6.502 3.485 1.00 55.20 N
ATOM 15 C8 G A1153 27.168 5.712 3.409 1.00 55.30 C
ATOM 16 N7 G A1153 27.386 4.503 3.816 1.00 55.02 N
ATOM 17 C5 G A1153 28.713 4.465 4.197 1.00 54.72 C
ATOM 18 C6 G A1153 29.495 3.399 4.713 1.00 54.36 C
ATOM 19 O6 G A1153 29.213 2.241 4.963 1.00 54.23 O
ATOM 20 N1 G A1153 30.774 3.794 4.958 1.00 54.15 N
ATOM 21 C2 G A1153 31.248 5.043 4.730 1.00 54.27 C
ATOM 22 N2 G A1153 32.531 5.223 5.029 1.00 54.04 N
ATOM 23 N3 G A1153 30.532 6.051 4.255 1.00 54.61 N
ATOM 24 C4 G A1153 29.263 5.707 3.999 1.00 54.82 C
ATOM 25 P U A1154 28.658 7.846 -1.776 1.00 50.90 P
ATOM 26 OP1 U A1154 28.745 8.837 -2.891 1.00 51.46 O
ATOM 27 OP2 U A1154 27.476 6.938 -1.709 1.00 50.94 O
ATOM 28 O5' U A1154 30.011 6.983 -1.709 1.00 50.64 O
TER
ATOM 1 O3' U B1132 35.401 6.743 5.724 1.00 43.78 O
ATOM 2 P C B1133 35.057 8.148 4.993 1.00 54.38 P
ATOM 3 OP1 C B1133 33.595 8.204 4.786 1.00 54.59 O
ATOM 4 OP2 C B1133 35.944 8.257 3.816 1.00 54.77 O
ATOM 5 O5' C B1133 35.486 9.203 6.083 1.00 54.03 O
ATOM 6 C5' C B1133 34.726 9.421 7.259 1.00 53.67 C
ATOM 7 C4' C B1133 34.735 10.877 7.608 1.00 53.69 C
ATOM 8 O4' C B1133 36.070 11.231 8.052 1.00 53.46 O
ATOM 9 C3' C B1133 34.434 11.793 6.417 1.00 54.26 C
ATOM 10 O3' C B1133 33.811 12.992 6.859 1.00 54.29 O
ATOM 11 C2' C B1133 35.811 12.113 5.890 1.00 54.37 C
ATOM 12 O2' C B1133 35.879 13.292 5.139 1.00 54.79 O
ATOM 13 C1' C B1133 36.624 12.203 7.180 1.00 53.84 C
ATOM 14 N1 C B1133 38.042 11.896 6.983 1.00 53.77 N
ATOM 15 C2 C B1133 39.012 12.844 7.278 1.00 53.70 C
ATOM 16 O2 C B1133 38.614 13.905 7.782 1.00 53.68 O
ATOM 17 N3 C B1133 40.339 12.608 7.052 1.00 53.67 N
ATOM 18 C4 C B1133 40.694 11.441 6.531 1.00 53.71 C
ATOM 19 N4 C B1133 41.991 11.195 6.306 1.00 53.70 N
ATOM 20 C5 C B1133 39.708 10.463 6.196 1.00 53.80 C
ATOM 21 C6 C B1133 38.418 10.725 6.429 1.00 53.82 C
ATOM 22 P A B1134 32.212 13.034 7.105 1.00 56.23 P
ATOM 23 OP1 A B1134 31.590 11.919 6.301 1.00 56.46 O
ATOM 24 OP2 A B1134 31.763 14.479 6.850 1.00 56.55 O
ATOM 25 O5' A B1134 32.111 12.683 8.674 1.00 55.63 O
TER
Atoms:
OP1: (24.029,5.294,2.049)
OP2: (23.625,7.834,2.469)
C3': (28.251,8.067,0.768)
C1': (28.268,7.922,3.100)
C5': (25.731,8.401,0.579)
O6: (29.213,2.241,4.963)
O4': (26.958,8.293,2.677)
C8: (27.168,5.712,3.409)
C2: (31.248,5.043,4.730)
C6: (29.495,3.399,4.713)
C5: (28.713,4.465,4.197)
C4: (29.263,5.707,3.999)
P: (23.991,6.702,1.531)
C4': (27.008,8.732,1.299)
C2': (29.206,8.201,1.940)
O2': (29.618,9.539,2.068)
N1: (30.774,3.794,4.958)
N2: (32.531,5.223,5.029)
N3: (30.532,6.051,4.255)
N7: (27.386,4.503,3.816)
N9: (28.265,6.502,3.485)
O5': (25.351,7.050,0.756)
O3': (28.706,8.669,-0.410)
OP2: (23.625,7.834,2.469)
C3': (28.251,8.067,0.768)
C1': (28.268,7.922,3.100)
C5': (25.731,8.401,0.579)
O6: (29.213,2.241,4.963)
O4': (26.958,8.293,2.677)
C8: (27.168,5.712,3.409)
C2: (31.248,5.043,4.730)
C6: (29.495,3.399,4.713)
C5: (28.713,4.465,4.197)
C4: (29.263,5.707,3.999)
P: (23.991,6.702,1.531)
C4': (27.008,8.732,1.299)
C2': (29.206,8.201,1.940)
O2': (29.618,9.539,2.068)
N1: (30.774,3.794,4.958)
N2: (32.531,5.223,5.029)
N3: (30.532,6.051,4.255)
N7: (27.386,4.503,3.816)
N9: (28.265,6.502,3.485)
O5': (25.351,7.050,0.756)
O3': (28.706,8.669,-0.410)
C2: (39.012,12.844,7.278)
OP1: (33.595,8.204,4.786)
OP2: (35.944,8.257,3.816)
C4: (40.694,11.441,6.531)
O5': (35.486,9.203,6.083)
C3': (34.434,11.793,6.417)
C1': (36.624,12.203,7.180)
O4': (36.070,11.231,8.052)
C5': (34.726,9.421,7.259)
P: (35.057,8.148,4.993)
O2: (38.614,13.905,7.782)
C4': (34.735,10.877,7.608)
C2': (35.811,12.113,5.890)
O2': (35.879,13.292,5.139)
N1: (38.042,11.896,6.983)
N3: (40.339,12.608,7.052)
N4: (41.991,11.195,6.306)
C6: (38.418,10.725,6.429)
C5: (39.708,10.463,6.196)
O3': (33.811,12.992,6.859)
OP1: (33.595,8.204,4.786)
OP2: (35.944,8.257,3.816)
C4: (40.694,11.441,6.531)
O5': (35.486,9.203,6.083)
C3': (34.434,11.793,6.417)
C1': (36.624,12.203,7.180)
O4': (36.070,11.231,8.052)
C5': (34.726,9.421,7.259)
P: (35.057,8.148,4.993)
O2: (38.614,13.905,7.782)
C4': (34.735,10.877,7.608)
C2': (35.811,12.113,5.890)
O2': (35.879,13.292,5.139)
N1: (38.042,11.896,6.983)
N3: (40.339,12.608,7.052)
N4: (41.991,11.195,6.306)
C6: (38.418,10.725,6.429)
C5: (39.708,10.463,6.196)
O3': (33.811,12.992,6.859)
Image (generated by PyMOL):