Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A1297:A122
Extra
PDB:
ATOM 1 O3' G A1296 23.794 -39.896 -34.788 1.00 32.63 O
ATOM 2 P G A1297 23.099 -38.703 -35.590 1.00 54.62 P
ATOM 3 OP1 G A1297 24.168 -37.704 -35.906 1.00 50.20 O
ATOM 4 OP2 G A1297 21.908 -38.255 -34.800 1.00 28.64 O
ATOM 5 O5' G A1297 22.639 -39.457 -36.916 1.00 34.46 O
ATOM 6 C5' G A1297 23.526 -40.354 -37.546 1.00 28.28 C
ATOM 7 C4' G A1297 22.890 -41.059 -38.697 1.00 35.57 C
ATOM 8 O4' G A1297 22.109 -42.174 -38.213 1.00 53.48 O
ATOM 9 C3' G A1297 21.900 -40.274 -39.532 1.00 27.97 C
ATOM 10 O3' G A1297 22.515 -39.357 -40.433 1.00 34.37 O
ATOM 11 C2' G A1297 21.160 -41.405 -40.226 1.00 39.31 C
ATOM 12 O2' G A1297 21.977 -41.993 -41.220 1.00 45.34 O
ATOM 13 C1' G A1297 21.030 -42.405 -39.088 1.00 40.33 C
ATOM 14 N9 G A1297 19.781 -42.216 -38.348 1.00 41.51 N
ATOM 15 C8 G A1297 19.591 -41.523 -37.186 1.00 39.33 C
ATOM 16 N7 G A1297 18.358 -41.532 -36.803 1.00 42.22 N
ATOM 17 C5 G A1297 17.708 -42.272 -37.781 1.00 48.35 C
ATOM 18 C6 G A1297 16.350 -42.637 -37.915 1.00 52.55 C
ATOM 19 O6 G A1297 15.407 -42.355 -37.161 1.00 55.93 O
ATOM 20 N1 G A1297 16.141 -43.403 -39.059 1.00 48.98 N
ATOM 21 C2 G A1297 17.097 -43.770 -39.963 1.00 44.76 C
ATOM 22 N2 G A1297 16.695 -44.502 -41.004 1.00 45.29 N
ATOM 23 N3 G A1297 18.361 -43.436 -39.852 1.00 47.75 N
ATOM 24 C4 G A1297 18.578 -42.701 -38.746 1.00 46.83 C
ATOM 25 P A A1298 21.845 -37.910 -40.739 1.00 37.52 P
ATOM 26 OP1 A A1298 22.955 -36.967 -41.024 1.00 51.85 O
ATOM 27 OP2 A A1298 20.903 -37.605 -39.622 1.00 37.20 O
ATOM 28 O5' A A1298 21.016 -38.176 -42.047 1.00 34.18 O
TER
ATOM 1 O3' C B 121 21.025 -45.658 -43.575 1.00 47.14 O
ATOM 2 P C B 122 19.646 -45.685 -44.371 1.00 33.90 P
ATOM 3 OP1 C B 122 18.568 -45.460 -43.387 1.00 46.03 O
ATOM 4 OP2 C B 122 19.631 -46.933 -45.190 1.00 14.65 O
ATOM 5 O5' C B 122 19.794 -44.414 -45.316 1.00 40.28 O
ATOM 6 C5' C B 122 19.942 -43.106 -44.770 1.00 37.55 C
ATOM 7 C4' C B 122 20.457 -42.131 -45.802 1.00 39.93 C
ATOM 8 O4' C B 122 21.715 -42.607 -46.330 1.00 32.19 O
ATOM 9 C3' C B 122 19.614 -41.965 -47.060 1.00 42.53 C
ATOM 10 O3' C B 122 18.437 -41.181 -46.887 1.00 31.73 O
ATOM 11 C2' C B 122 20.622 -41.386 -48.052 1.00 40.53 C
ATOM 12 O2' C B 122 20.849 -39.998 -47.813 1.00 36.64 O
ATOM 13 C1' C B 122 21.883 -42.140 -47.652 1.00 30.65 C
ATOM 14 N1 C B 122 22.152 -43.275 -48.513 1.00 24.53 N
ATOM 15 C2 C B 122 22.613 -43.046 -49.816 1.00 29.70 C
ATOM 16 O2 C B 122 22.717 -41.887 -50.233 1.00 28.61 O
ATOM 17 N3 C B 122 22.915 -44.092 -50.605 1.00 25.15 N
ATOM 18 C4 C B 122 22.785 -45.313 -50.095 1.00 25.56 C
ATOM 19 N4 C B 122 23.083 -46.343 -50.874 1.00 26.64 N
ATOM 20 C5 C B 122 22.351 -45.557 -48.760 1.00 29.46 C
ATOM 21 C6 C B 122 22.050 -44.510 -47.984 1.00 24.07 C
ATOM 22 P G B 123 17.197 -41.457 -47.841 1.00 47.33 P
ATOM 23 OP1 G B 123 15.955 -41.065 -47.109 1.00 53.73 O
ATOM 24 OP2 G B 123 17.330 -42.858 -48.301 1.00 43.93 O
ATOM 25 O5' G B 123 17.474 -40.452 -49.057 1.00 39.28 O
TER
ATOM 2 P G A1297 23.099 -38.703 -35.590 1.00 54.62 P
ATOM 3 OP1 G A1297 24.168 -37.704 -35.906 1.00 50.20 O
ATOM 4 OP2 G A1297 21.908 -38.255 -34.800 1.00 28.64 O
ATOM 5 O5' G A1297 22.639 -39.457 -36.916 1.00 34.46 O
ATOM 6 C5' G A1297 23.526 -40.354 -37.546 1.00 28.28 C
ATOM 7 C4' G A1297 22.890 -41.059 -38.697 1.00 35.57 C
ATOM 8 O4' G A1297 22.109 -42.174 -38.213 1.00 53.48 O
ATOM 9 C3' G A1297 21.900 -40.274 -39.532 1.00 27.97 C
ATOM 10 O3' G A1297 22.515 -39.357 -40.433 1.00 34.37 O
ATOM 11 C2' G A1297 21.160 -41.405 -40.226 1.00 39.31 C
ATOM 12 O2' G A1297 21.977 -41.993 -41.220 1.00 45.34 O
ATOM 13 C1' G A1297 21.030 -42.405 -39.088 1.00 40.33 C
ATOM 14 N9 G A1297 19.781 -42.216 -38.348 1.00 41.51 N
ATOM 15 C8 G A1297 19.591 -41.523 -37.186 1.00 39.33 C
ATOM 16 N7 G A1297 18.358 -41.532 -36.803 1.00 42.22 N
ATOM 17 C5 G A1297 17.708 -42.272 -37.781 1.00 48.35 C
ATOM 18 C6 G A1297 16.350 -42.637 -37.915 1.00 52.55 C
ATOM 19 O6 G A1297 15.407 -42.355 -37.161 1.00 55.93 O
ATOM 20 N1 G A1297 16.141 -43.403 -39.059 1.00 48.98 N
ATOM 21 C2 G A1297 17.097 -43.770 -39.963 1.00 44.76 C
ATOM 22 N2 G A1297 16.695 -44.502 -41.004 1.00 45.29 N
ATOM 23 N3 G A1297 18.361 -43.436 -39.852 1.00 47.75 N
ATOM 24 C4 G A1297 18.578 -42.701 -38.746 1.00 46.83 C
ATOM 25 P A A1298 21.845 -37.910 -40.739 1.00 37.52 P
ATOM 26 OP1 A A1298 22.955 -36.967 -41.024 1.00 51.85 O
ATOM 27 OP2 A A1298 20.903 -37.605 -39.622 1.00 37.20 O
ATOM 28 O5' A A1298 21.016 -38.176 -42.047 1.00 34.18 O
TER
ATOM 1 O3' C B 121 21.025 -45.658 -43.575 1.00 47.14 O
ATOM 2 P C B 122 19.646 -45.685 -44.371 1.00 33.90 P
ATOM 3 OP1 C B 122 18.568 -45.460 -43.387 1.00 46.03 O
ATOM 4 OP2 C B 122 19.631 -46.933 -45.190 1.00 14.65 O
ATOM 5 O5' C B 122 19.794 -44.414 -45.316 1.00 40.28 O
ATOM 6 C5' C B 122 19.942 -43.106 -44.770 1.00 37.55 C
ATOM 7 C4' C B 122 20.457 -42.131 -45.802 1.00 39.93 C
ATOM 8 O4' C B 122 21.715 -42.607 -46.330 1.00 32.19 O
ATOM 9 C3' C B 122 19.614 -41.965 -47.060 1.00 42.53 C
ATOM 10 O3' C B 122 18.437 -41.181 -46.887 1.00 31.73 O
ATOM 11 C2' C B 122 20.622 -41.386 -48.052 1.00 40.53 C
ATOM 12 O2' C B 122 20.849 -39.998 -47.813 1.00 36.64 O
ATOM 13 C1' C B 122 21.883 -42.140 -47.652 1.00 30.65 C
ATOM 14 N1 C B 122 22.152 -43.275 -48.513 1.00 24.53 N
ATOM 15 C2 C B 122 22.613 -43.046 -49.816 1.00 29.70 C
ATOM 16 O2 C B 122 22.717 -41.887 -50.233 1.00 28.61 O
ATOM 17 N3 C B 122 22.915 -44.092 -50.605 1.00 25.15 N
ATOM 18 C4 C B 122 22.785 -45.313 -50.095 1.00 25.56 C
ATOM 19 N4 C B 122 23.083 -46.343 -50.874 1.00 26.64 N
ATOM 20 C5 C B 122 22.351 -45.557 -48.760 1.00 29.46 C
ATOM 21 C6 C B 122 22.050 -44.510 -47.984 1.00 24.07 C
ATOM 22 P G B 123 17.197 -41.457 -47.841 1.00 47.33 P
ATOM 23 OP1 G B 123 15.955 -41.065 -47.109 1.00 53.73 O
ATOM 24 OP2 G B 123 17.330 -42.858 -48.301 1.00 43.93 O
ATOM 25 O5' G B 123 17.474 -40.452 -49.057 1.00 39.28 O
TER
Atoms:
OP1: (24.168,-37.704,-35.906)
OP2: (21.908,-38.255,-34.800)
C3': (21.900,-40.274,-39.532)
C1': (21.030,-42.405,-39.088)
C5': (23.526,-40.354,-37.546)
O6: (15.407,-42.355,-37.161)
O4': (22.109,-42.174,-38.213)
C8: (19.591,-41.523,-37.186)
C2: (17.097,-43.770,-39.963)
C6: (16.350,-42.637,-37.915)
C5: (17.708,-42.272,-37.781)
C4: (18.578,-42.701,-38.746)
P: (23.099,-38.703,-35.590)
C4': (22.890,-41.059,-38.697)
C2': (21.160,-41.405,-40.226)
O2': (21.977,-41.993,-41.220)
N1: (16.141,-43.403,-39.059)
N2: (16.695,-44.502,-41.004)
N3: (18.361,-43.436,-39.852)
N7: (18.358,-41.532,-36.803)
N9: (19.781,-42.216,-38.348)
O5': (22.639,-39.457,-36.916)
O3': (22.515,-39.357,-40.433)
OP2: (21.908,-38.255,-34.800)
C3': (21.900,-40.274,-39.532)
C1': (21.030,-42.405,-39.088)
C5': (23.526,-40.354,-37.546)
O6: (15.407,-42.355,-37.161)
O4': (22.109,-42.174,-38.213)
C8: (19.591,-41.523,-37.186)
C2: (17.097,-43.770,-39.963)
C6: (16.350,-42.637,-37.915)
C5: (17.708,-42.272,-37.781)
C4: (18.578,-42.701,-38.746)
P: (23.099,-38.703,-35.590)
C4': (22.890,-41.059,-38.697)
C2': (21.160,-41.405,-40.226)
O2': (21.977,-41.993,-41.220)
N1: (16.141,-43.403,-39.059)
N2: (16.695,-44.502,-41.004)
N3: (18.361,-43.436,-39.852)
N7: (18.358,-41.532,-36.803)
N9: (19.781,-42.216,-38.348)
O5': (22.639,-39.457,-36.916)
O3': (22.515,-39.357,-40.433)
C2: (22.613,-43.046,-49.816)
OP1: (18.568,-45.460,-43.387)
OP2: (19.631,-46.933,-45.190)
C4: (22.785,-45.313,-50.095)
O5': (19.794,-44.414,-45.316)
C3': (19.614,-41.965,-47.060)
C1': (21.883,-42.140,-47.652)
O4': (21.715,-42.607,-46.330)
C5': (19.942,-43.106,-44.770)
P: (19.646,-45.685,-44.371)
O2: (22.717,-41.887,-50.233)
C4': (20.457,-42.131,-45.802)
C2': (20.622,-41.386,-48.052)
O2': (20.849,-39.998,-47.813)
N1: (22.152,-43.275,-48.513)
N3: (22.915,-44.092,-50.605)
N4: (23.083,-46.343,-50.874)
C6: (22.050,-44.510,-47.984)
C5: (22.351,-45.557,-48.760)
O3': (18.437,-41.181,-46.887)
OP1: (18.568,-45.460,-43.387)
OP2: (19.631,-46.933,-45.190)
C4: (22.785,-45.313,-50.095)
O5': (19.794,-44.414,-45.316)
C3': (19.614,-41.965,-47.060)
C1': (21.883,-42.140,-47.652)
O4': (21.715,-42.607,-46.330)
C5': (19.942,-43.106,-44.770)
P: (19.646,-45.685,-44.371)
O2: (22.717,-41.887,-50.233)
C4': (20.457,-42.131,-45.802)
C2': (20.622,-41.386,-48.052)
O2': (20.849,-39.998,-47.813)
N1: (22.152,-43.275,-48.513)
N3: (22.915,-44.092,-50.605)
N4: (23.083,-46.343,-50.874)
C6: (22.050,-44.510,-47.984)
C5: (22.351,-45.557,-48.760)
O3': (18.437,-41.181,-46.887)
Image (generated by PyMOL):