ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:B55:B53

Extra

PDB:
ATOM 1 O3' U A 54 66.082 11.965 114.019 1.00 81.69 O
ATOM 2 P A A 55 66.430 12.270 115.542 1.00 81.66 P
ATOM 3 OP1 A A 55 66.189 11.003 116.283 1.00 81.31 O
ATOM 4 OP2 A A 55 65.702 13.509 115.951 1.00 81.42 O
ATOM 5 O5' A A 55 68.005 12.545 115.484 1.00 80.81 O
ATOM 6 C5' A A 55 68.737 13.040 116.637 1.00 78.66 C
ATOM 7 C4' A A 55 69.883 13.925 116.188 1.00 76.54 C
ATOM 8 O4' A A 55 70.848 13.156 115.429 1.00 76.84 O
ATOM 9 C3' A A 55 69.504 15.067 115.264 1.00 75.02 C
ATOM 10 O3' A A 55 69.075 16.178 116.038 1.00 74.68 O
ATOM 11 C2' A A 55 70.815 15.358 114.549 1.00 74.63 C
ATOM 12 O2' A A 55 71.706 16.120 115.335 1.00 75.71 O
ATOM 13 C1' A A 55 71.379 13.950 114.380 1.00 75.05 C
ATOM 14 N9 A A 55 70.980 13.335 113.117 1.00 74.61 N
ATOM 15 C8 A A 55 70.054 12.338 112.924 1.00 74.17 C
ATOM 16 N7 A A 55 69.909 11.993 111.671 1.00 73.63 N
ATOM 17 C5 A A 55 70.799 12.815 110.993 1.00 72.65 C
ATOM 18 C6 A A 55 71.116 12.940 109.637 1.00 71.66 C
ATOM 19 N6 A A 55 70.548 12.211 108.677 1.00 71.87 N
ATOM 20 N1 A A 55 72.046 13.854 109.291 1.00 70.76 N
ATOM 21 C2 A A 55 72.606 14.594 110.254 1.00 72.05 C
ATOM 22 N3 A A 55 72.386 14.572 111.567 1.00 73.06 N
ATOM 23 C4 A A 55 71.462 13.646 111.872 1.00 73.32 C
ATOM 24 P A A 56 67.796 17.035 115.581 1.00 74.27 P
ATOM 25 OP1 A A 56 67.346 17.752 116.808 1.00 73.86 O
ATOM 26 OP2 A A 56 66.856 16.131 114.869 1.00 74.19 O
ATOM 27 O5' A A 56 68.381 18.093 114.539 1.00 73.65 O
TER

ATOM 1 O3' G B 52 72.067 2.206 109.595 1.00 95.46 O
ATOM 2 P A B 53 70.610 2.606 110.148 1.00 96.15 P
ATOM 3 OP1 A B 53 70.428 2.057 111.532 1.00 95.98 O
ATOM 4 OP2 A B 53 69.629 2.258 109.080 1.00 95.08 O
ATOM 5 O5' A B 53 70.686 4.192 110.271 1.00 94.04 O
ATOM 6 C5' A B 53 71.623 4.823 111.169 1.00 90.68 C
ATOM 7 C4' A B 53 71.374 6.310 111.207 1.00 87.88 C
ATOM 8 O4' A B 53 71.676 6.906 109.911 1.00 86.12 O
ATOM 9 C3' A B 53 69.925 6.681 111.452 1.00 86.43 C
ATOM 10 O3' A B 53 69.621 6.631 112.837 1.00 85.83 O
ATOM 11 C2' A B 53 69.858 8.088 110.876 1.00 85.56 C
ATOM 12 O2' A B 53 70.423 9.034 111.763 1.00 85.83 O
ATOM 13 C1' A B 53 70.755 7.952 109.642 1.00 84.60 C
ATOM 14 N9 A B 53 70.020 7.624 108.419 1.00 83.39 N
ATOM 15 C8 A B 53 69.833 6.385 107.855 1.00 83.64 C
ATOM 16 N7 A B 53 69.135 6.405 106.741 1.00 83.29 N
ATOM 17 C5 A B 53 68.837 7.748 106.560 1.00 82.97 C
ATOM 18 C6 A B 53 68.117 8.431 105.560 1.00 82.28 C
ATOM 19 N6 A B 53 67.543 7.832 104.512 1.00 80.97 N
ATOM 20 N1 A B 53 68.005 9.770 105.677 1.00 82.06 N
ATOM 21 C2 A B 53 68.578 10.375 106.727 1.00 82.20 C
ATOM 22 N3 A B 53 69.278 9.847 107.730 1.00 82.90 N
ATOM 23 C4 A B 53 69.374 8.512 107.588 1.00 83.34 C
ATOM 24 P U B 54 68.099 6.471 113.307 1.00 85.51 P
ATOM 25 OP1 U B 54 68.154 6.134 114.758 1.00 85.68 O
ATOM 26 OP2 U B 54 67.422 5.556 112.350 1.00 85.51 O
ATOM 27 O5' U B 54 67.479 7.927 113.137 1.00 85.90 O
TER

Atoms:
OP1: (66.189,11.003,116.283)
OP2: (65.702,13.509,115.951)
C3': (69.504,15.067,115.264)
C1': (71.379,13.950,114.380)
C5': (68.737,13.040,116.637)
O4': (70.848,13.156,115.429)
C8: (70.054,12.338,112.924)
O2': (71.706,16.120,115.335)
C6: (71.116,12.940,109.637)
C5: (70.799,12.815,110.993)
C4: (71.462,13.646,111.872)
P: (66.430,12.270,115.542)
C4': (69.883,13.925,116.188)
C2': (70.815,15.358,114.549)
C2: (72.606,14.594,110.254)
N1: (72.046,13.854,109.291)
N3: (72.386,14.572,111.567)
N6: (70.548,12.211,108.677)
N7: (69.909,11.993,111.671)
N9: (70.980,13.335,113.117)
O5': (68.005,12.545,115.484)
O3': (69.075,16.178,116.038)
OP1: (70.428,2.057,111.532)
OP2: (69.629,2.258,109.080)
C3': (69.925,6.681,111.452)
C1': (70.755,7.952,109.642)
C5': (71.623,4.823,111.169)
O4': (71.676,6.906,109.911)
C8: (69.833,6.385,107.855)
O2': (70.423,9.034,111.763)
C6: (68.117,8.431,105.560)
C5: (68.837,7.748,106.560)
C4: (69.374,8.512,107.588)
P: (70.610,2.606,110.148)
C4': (71.374,6.310,111.207)
C2': (69.858,8.088,110.876)
C2: (68.578,10.375,106.727)
N1: (68.005,9.770,105.677)
N3: (69.278,9.847,107.730)
N6: (67.543,7.832,104.512)
N7: (69.135,6.405,106.741)
N9: (70.020,7.624,108.419)
O5': (70.686,4.192,110.271)
O3': (69.621,6.631,112.837)
Image (generated by PyMOL):
PyMOL image
show in jmol