ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1L8V:A122:A121

Extra

PDB:
ATOM 1 O3' A A 121 -28.963 -76.620 102.287 1.00100.32 O
ATOM 2 P A A 122 -29.384 -77.090 103.770 1.00100.37 P
ATOM 3 OP1 A A 122 -29.280 -78.581 103.743 1.00100.78 O
ATOM 4 OP2 A A 122 -30.665 -76.450 104.209 1.00100.87 O
ATOM 5 O5' A A 122 -28.200 -76.586 104.719 1.00 98.79 O
ATOM 6 C5' A A 122 -27.307 -77.524 105.350 1.00 97.79 C
ATOM 7 C4' A A 122 -26.400 -76.828 106.358 1.00 97.03 C
ATOM 8 O4' A A 122 -25.698 -75.740 105.706 1.00 96.33 O
ATOM 9 C3' A A 122 -27.039 -76.202 107.592 1.00 97.71 C
ATOM 10 O3' A A 122 -27.145 -77.170 108.636 1.00 99.80 O
ATOM 11 C2' A A 122 -26.016 -75.132 107.964 1.00 96.32 C
ATOM 12 O2' A A 122 -24.879 -75.656 108.617 1.00 96.25 O
ATOM 13 C1' A A 122 -25.580 -74.642 106.586 1.00 95.05 C
ATOM 14 N9 A A 122 -26.442 -73.582 106.071 1.00 92.50 N
ATOM 15 C8 A A 122 -27.318 -73.683 105.028 1.00 90.52 C
ATOM 16 N7 A A 122 -27.982 -72.586 104.787 1.00 90.17 N
ATOM 17 C5 A A 122 -27.511 -71.694 105.735 1.00 91.21 C
ATOM 18 C6 A A 122 -27.828 -70.354 106.012 1.00 91.26 C
ATOM 19 N6 A A 122 -28.737 -69.647 105.332 1.00 90.57 N
ATOM 20 N1 A A 122 -27.177 -69.755 107.024 1.00 91.75 N
ATOM 21 C2 A A 122 -26.274 -70.465 107.711 1.00 91.60 C
ATOM 22 N3 A A 122 -25.892 -71.726 107.549 1.00 91.75 N
ATOM 23 C4 A A 122 -26.557 -72.292 106.531 1.00 91.97 C
ATOM 24 P G A 123 -28.511 -77.313 109.469 1.00100.20 P
ATOM 25 OP1 G A 123 -28.182 -78.210 110.605 1.00100.08 O
ATOM 26 OP2 G A 123 -29.597 -77.676 108.533 1.00101.58 O
ATOM 27 O5' G A 123 -28.820 -75.858 110.027 1.00100.02 O
TER

ATOM 1 O3' U B 120 -27.667 -75.725 96.774 1.00 96.24 O
ATOM 2 P A B 121 -28.919 -76.308 97.582 1.00 97.91 P
ATOM 3 OP1 A B 121 -28.557 -77.714 97.952 1.00 98.96 O
ATOM 4 OP2 A B 121 -30.169 -76.028 96.835 1.00 95.82 O
ATOM 5 O5' A B 121 -28.960 -75.404 98.888 1.00 98.33 O
ATOM 6 C5' A B 121 -27.873 -75.414 99.817 1.00 99.79 C
ATOM 7 C4' A B 121 -28.319 -74.810 101.113 1.00 99.59 C
ATOM 8 O4' A B 121 -28.675 -73.441 100.894 1.00 99.31 O
ATOM 9 C3' A B 121 -29.571 -75.479 101.631 1.00100.12 C
ATOM 10 O3' A B 121 -28.963 -76.620 102.287 1.00100.32 O
ATOM 11 C2' A B 121 -30.250 -74.371 102.447 1.00100.22 C
ATOM 12 O2' A B 121 -29.932 -74.335 103.819 1.00101.60 O
ATOM 13 C1' A B 121 -29.741 -73.102 101.735 1.00100.40 C
ATOM 14 N9 A B 121 -30.541 -72.094 101.041 1.00100.98 N
ATOM 15 C8 A B 121 -31.167 -72.151 99.825 1.00102.74 C
ATOM 16 N7 A B 121 -31.701 -71.011 99.451 1.00103.18 N
ATOM 17 C5 A B 121 -31.430 -70.153 100.506 1.00103.23 C
ATOM 18 C6 A B 121 -31.733 -68.791 100.733 1.00103.24 C
ATOM 19 N6 A B 121 -32.407 -68.017 99.876 1.00102.09 N
ATOM 20 N1 A B 121 -31.311 -68.243 101.890 1.00102.26 N
ATOM 21 C2 A B 121 -30.635 -69.012 102.754 1.00103.16 C
ATOM 22 N3 A B 121 -30.293 -70.292 102.657 1.00103.09 N
ATOM 23 C4 A B 121 -30.728 -70.811 101.497 1.00102.75 C
ATOM 24 P A B 122 -29.384 -77.090 103.770 1.00100.37 P
ATOM 25 OP1 A B 122 -29.280 -78.581 103.743 1.00100.78 O
ATOM 26 OP2 A B 122 -30.665 -76.450 104.209 1.00100.87 O
ATOM 27 O5' A B 122 -28.200 -76.586 104.719 1.00 98.79 O
TER

Atoms:
OP1: (-29.280,-78.581,103.743)
OP2: (-30.665,-76.450,104.209)
C3': (-27.039,-76.202,107.592)
C1': (-25.580,-74.642,106.586)
C5': (-27.307,-77.524,105.350)
O4': (-25.698,-75.740,105.706)
C8: (-27.318,-73.683,105.028)
O2': (-24.879,-75.656,108.617)
C6: (-27.828,-70.354,106.012)
C5: (-27.511,-71.694,105.735)
C4: (-26.557,-72.292,106.531)
P: (-29.384,-77.090,103.770)
C4': (-26.400,-76.828,106.358)
C2': (-26.016,-75.132,107.964)
C2: (-26.274,-70.465,107.711)
N1: (-27.177,-69.755,107.024)
N3: (-25.892,-71.726,107.549)
N6: (-28.737,-69.647,105.332)
N7: (-27.982,-72.586,104.787)
N9: (-26.442,-73.582,106.071)
O5': (-28.200,-76.586,104.719)
O3': (-27.145,-77.170,108.636)
OP1: (-28.557,-77.714,97.952)
OP2: (-30.169,-76.028,96.835)
C3': (-29.571,-75.479,101.631)
C1': (-29.741,-73.102,101.735)
C5': (-27.873,-75.414,99.817)
O4': (-28.675,-73.441,100.894)
C8: (-31.167,-72.151,99.825)
O2': (-29.932,-74.335,103.819)
C6: (-31.733,-68.791,100.733)
C5: (-31.430,-70.153,100.506)
C4: (-30.728,-70.811,101.497)
P: (-28.919,-76.308,97.582)
C4': (-28.319,-74.810,101.113)
C2': (-30.250,-74.371,102.447)
C2: (-30.635,-69.012,102.754)
N1: (-31.311,-68.243,101.890)
N3: (-30.293,-70.292,102.657)
N6: (-32.407,-68.017,99.876)
N7: (-31.701,-71.011,99.451)
N9: (-30.541,-72.094,101.041)
O5': (-28.960,-75.404,98.888)
O3': (-28.963,-76.620,102.287)
Image (generated by PyMOL):
PyMOL image
show in jmol