ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1658:A1492

Extra

PDB:
ATOM 1 O3' G A1657 13.545 -13.896 12.119 1.00 96.81 O
ATOM 2 P G A1658 12.090 -13.983 11.454 1.00 97.25 P
ATOM 3 OP1 G A1658 12.045 -12.965 10.371 1.00 85.37 O
ATOM 4 OP2 G A1658 11.103 -13.900 12.552 1.00 85.43 O
ATOM 5 O5' G A1658 12.077 -15.448 10.828 1.00110.56 O
ATOM 6 C5' G A1658 13.127 -15.891 9.979 1.00105.18 C
ATOM 7 C4' G A1658 12.929 -17.325 9.550 1.00101.81 C
ATOM 8 O4' G A1658 13.158 -18.218 10.674 1.00103.89 O
ATOM 9 C3' G A1658 11.536 -17.699 9.070 1.00 92.77 C
ATOM 10 O3' G A1658 11.283 -17.307 7.733 1.00 94.75 O
ATOM 11 C2' G A1658 11.532 -19.203 9.266 1.00 99.80 C
ATOM 12 O2' G A1658 12.291 -19.834 8.249 1.00106.80 O
ATOM 13 C1' G A1658 12.297 -19.334 10.577 1.00101.25 C
ATOM 14 N9 G A1658 11.391 -19.331 11.740 1.00109.30 N
ATOM 15 C8 G A1658 11.093 -18.257 12.541 1.00110.60 C
ATOM 16 N7 G A1658 10.258 -18.544 13.501 1.00107.72 N
ATOM 17 C5 G A1658 9.987 -19.889 13.323 1.00104.00 C
ATOM 18 C6 G A1658 9.149 -20.740 14.072 1.00108.70 C
ATOM 19 O6 G A1658 8.463 -20.450 15.064 1.00117.58 O
ATOM 20 N1 G A1658 9.160 -22.032 13.555 1.00106.82 N
ATOM 21 C2 G A1658 9.884 -22.441 12.464 1.00106.04 C
ATOM 22 N2 G A1658 9.760 -23.728 12.119 1.00102.91 N
ATOM 23 N3 G A1658 10.672 -21.652 11.758 1.00106.40 N
ATOM 24 C4 G A1658 10.674 -20.395 12.241 1.00106.92 C
ATOM 25 P U A1659 9.796 -16.914 7.270 1.00100.17 P
ATOM 26 OP1 U A1659 9.808 -16.837 5.791 1.00122.13 O
ATOM 27 OP2 U A1659 9.400 -15.715 8.042 1.00130.83 O
ATOM 28 O5' U A1659 8.927 -18.161 7.744 1.00 91.27 O
TER

ATOM 1 O3' C B1491 9.859 -25.911 9.402 1.00 44.75 O
ATOM 2 P C B1492 10.637 -25.214 8.195 1.00 58.86 P
ATOM 3 OP1 C B1492 11.264 -23.986 8.733 1.00 91.15 O
ATOM 4 OP2 C B1492 9.681 -25.094 7.060 1.00 80.63 O
ATOM 5 O5' C B1492 11.760 -26.285 7.849 1.00 67.22 O
ATOM 6 C5' C B1492 12.699 -26.697 8.832 1.00 62.37 C
ATOM 7 C4' C B1492 13.679 -27.708 8.285 1.00 57.72 C
ATOM 8 O4' C B1492 13.015 -28.977 8.061 1.00 55.32 O
ATOM 9 C3' C B1492 14.300 -27.377 6.942 1.00 55.82 C
ATOM 10 O3' C B1492 15.364 -26.454 7.044 1.00 53.68 O
ATOM 11 C2' C B1492 14.726 -28.745 6.436 1.00 57.34 C
ATOM 12 O2' C B1492 15.918 -29.157 7.074 1.00 55.45 O
ATOM 13 C1' C B1492 13.584 -29.624 6.946 1.00 55.10 C
ATOM 14 N1 C B1492 12.538 -29.806 5.931 1.00 60.46 N
ATOM 15 C2 C B1492 12.899 -30.481 4.774 1.00 66.08 C
ATOM 16 O2 C B1492 14.066 -30.884 4.693 1.00 68.04 O
ATOM 17 N3 C B1492 11.982 -30.673 3.792 1.00 68.04 N
ATOM 18 C4 C B1492 10.738 -30.223 3.946 1.00 62.06 C
ATOM 19 N4 C B1492 9.876 -30.442 2.953 1.00 57.27 N
ATOM 20 C5 C B1492 10.347 -29.529 5.127 1.00 64.18 C
ATOM 21 C6 C B1492 11.267 -29.340 6.088 1.00 60.15 C
ATOM 22 P G B1493 15.579 -25.354 5.903 1.00 64.46 P
ATOM 23 OP1 G B1493 16.887 -24.714 6.159 1.00 76.35 O
ATOM 24 OP2 G B1493 14.361 -24.501 5.875 1.00 71.21 O
ATOM 25 O5' G B1493 15.653 -26.235 4.580 1.00 60.21 O
TER

Atoms:
OP1: (12.045,-12.965,10.371)
OP2: (11.103,-13.900,12.552)
C3': (11.536,-17.699,9.070)
C1': (12.297,-19.334,10.577)
C5': (13.127,-15.891,9.979)
O6: (8.463,-20.450,15.064)
O4': (13.158,-18.218,10.674)
C8: (11.093,-18.257,12.541)
C2: (9.884,-22.441,12.464)
C6: (9.149,-20.740,14.072)
C5: (9.987,-19.889,13.323)
C4: (10.674,-20.395,12.241)
P: (12.090,-13.983,11.454)
C4': (12.929,-17.325,9.550)
C2': (11.532,-19.203,9.266)
O2': (12.291,-19.834,8.249)
N1: (9.160,-22.032,13.555)
N2: (9.760,-23.728,12.119)
N3: (10.672,-21.652,11.758)
N7: (10.258,-18.544,13.501)
N9: (11.391,-19.331,11.740)
O5': (12.077,-15.448,10.828)
O3': (11.283,-17.307,7.733)
C2: (12.899,-30.481,4.774)
OP1: (11.264,-23.986,8.733)
OP2: (9.681,-25.094,7.060)
C4: (10.738,-30.223,3.946)
O5': (11.760,-26.285,7.849)
C3': (14.300,-27.377,6.942)
C1': (13.584,-29.624,6.946)
O4': (13.015,-28.977,8.061)
C5': (12.699,-26.697,8.832)
P: (10.637,-25.214,8.195)
O2: (14.066,-30.884,4.693)
C4': (13.679,-27.708,8.285)
C2': (14.726,-28.745,6.436)
O2': (15.918,-29.157,7.074)
N1: (12.538,-29.806,5.931)
N3: (11.982,-30.673,3.792)
N4: (9.876,-30.442,2.953)
C6: (11.267,-29.340,6.088)
C5: (10.347,-29.529,5.127)
O3': (15.364,-26.454,7.044)
Image (generated by PyMOL):
PyMOL image
show in jmol