ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:B55:B53

Extra

PDB:
ATOM 1 O3' U A 54 65.705 11.926 113.280 1.00 67.10 O
ATOM 2 P A A 55 66.060 12.237 114.814 1.00 68.44 P
ATOM 3 OP1 A A 55 65.817 10.996 115.590 1.00 69.05 O
ATOM 4 OP2 A A 55 65.362 13.497 115.207 1.00 68.38 O
ATOM 5 O5' A A 55 67.631 12.499 114.765 1.00 67.03 O
ATOM 6 C5' A A 55 68.343 13.018 115.906 1.00 65.69 C
ATOM 7 C4' A A 55 69.519 13.853 115.447 1.00 64.36 C
ATOM 8 O4' A A 55 70.418 13.040 114.651 1.00 63.90 O
ATOM 9 C3' A A 55 69.187 15.021 114.539 1.00 63.84 C
ATOM 10 O3' A A 55 68.775 16.141 115.320 1.00 63.66 O
ATOM 11 C2' A A 55 70.518 15.259 113.834 1.00 63.23 C
ATOM 12 O2' A A 55 71.458 15.911 114.670 1.00 63.77 O
ATOM 13 C1' A A 55 70.995 13.825 113.619 1.00 62.10 C
ATOM 14 N9 A A 55 70.600 13.245 112.332 1.00 60.66 N
ATOM 15 C8 A A 55 69.689 12.237 112.121 1.00 60.27 C
ATOM 16 N7 A A 55 69.567 11.887 110.864 1.00 59.14 N
ATOM 17 C5 A A 55 70.445 12.727 110.197 1.00 58.08 C
ATOM 18 C6 A A 55 70.783 12.852 108.840 1.00 56.88 C
ATOM 19 N6 A A 55 70.261 12.094 107.870 1.00 56.03 N
ATOM 20 N1 A A 55 71.692 13.791 108.505 1.00 56.61 N
ATOM 21 C2 A A 55 72.224 14.542 109.474 1.00 57.56 C
ATOM 22 N3 A A 55 71.993 14.517 110.786 1.00 59.12 N
ATOM 23 C4 A A 55 71.082 13.576 111.086 1.00 59.21 C
ATOM 24 P A A 56 67.493 17.006 114.876 1.00 63.84 P
ATOM 25 OP1 A A 56 67.059 17.740 116.088 1.00 63.67 O
ATOM 26 OP2 A A 56 66.521 16.166 114.132 1.00 62.69 O
ATOM 27 O5' A A 56 68.076 18.047 113.831 1.00 63.59 O
TER

ATOM 1 O3' G B 52 71.693 2.119 108.787 1.00 76.87 O
ATOM 2 P A B 53 70.250 2.503 109.370 1.00 77.13 P
ATOM 3 OP1 A B 53 70.143 1.944 110.748 1.00 77.98 O
ATOM 4 OP2 A B 53 69.240 2.133 108.345 1.00 76.75 O
ATOM 5 O5' A B 53 70.299 4.090 109.480 1.00 76.35 O
ATOM 6 C5' A B 53 71.201 4.748 110.392 1.00 73.93 C
ATOM 7 C4' A B 53 70.910 6.230 110.425 1.00 71.79 C
ATOM 8 O4' A B 53 71.203 6.820 109.131 1.00 70.46 O
ATOM 9 C3' A B 53 69.455 6.592 110.663 1.00 71.20 C
ATOM 10 O3' A B 53 69.149 6.539 112.047 1.00 72.66 O
ATOM 11 C2' A B 53 69.385 7.998 110.087 1.00 69.58 C
ATOM 12 O2' A B 53 70.000 8.960 110.920 1.00 70.10 O
ATOM 13 C1' A B 53 70.268 7.848 108.855 1.00 68.28 C
ATOM 14 N9 A B 53 69.522 7.493 107.650 1.00 66.56 N
ATOM 15 C8 A B 53 69.341 6.256 107.073 1.00 66.36 C
ATOM 16 N7 A B 53 68.661 6.290 105.953 1.00 65.38 N
ATOM 17 C5 A B 53 68.362 7.635 105.786 1.00 65.16 C
ATOM 18 C6 A B 53 67.673 8.334 104.778 1.00 64.26 C
ATOM 19 N6 A B 53 67.145 7.754 103.699 1.00 63.92 N
ATOM 20 N1 A B 53 67.549 9.671 104.918 1.00 64.48 N
ATOM 21 C2 A B 53 68.087 10.258 105.996 1.00 65.09 C
ATOM 22 N3 A B 53 68.762 9.712 107.004 1.00 65.53 N
ATOM 23 C4 A B 53 68.869 8.383 106.836 1.00 65.79 C
ATOM 24 P U B 54 67.622 6.388 112.521 1.00 74.07 P
ATOM 25 OP1 U B 54 67.701 6.065 113.971 1.00 73.65 O
ATOM 26 OP2 U B 54 66.905 5.475 111.588 1.00 73.44 O
ATOM 27 O5' U B 54 67.012 7.851 112.372 1.00 72.48 O
TER

Atoms:
OP1: (65.817,10.996,115.590)
OP2: (65.362,13.497,115.207)
C3': (69.187,15.021,114.539)
C1': (70.995,13.825,113.619)
C5': (68.343,13.018,115.906)
O4': (70.418,13.040,114.651)
C8: (69.689,12.237,112.121)
O2': (71.458,15.911,114.670)
C6: (70.783,12.852,108.840)
C5: (70.445,12.727,110.197)
C4: (71.082,13.576,111.086)
P: (66.060,12.237,114.814)
C4': (69.519,13.853,115.447)
C2': (70.518,15.259,113.834)
C2: (72.224,14.542,109.474)
N1: (71.692,13.791,108.505)
N3: (71.993,14.517,110.786)
N6: (70.261,12.094,107.870)
N7: (69.567,11.887,110.864)
N9: (70.600,13.245,112.332)
O5': (67.631,12.499,114.765)
O3': (68.775,16.141,115.320)
OP1: (70.143,1.944,110.748)
OP2: (69.240,2.133,108.345)
C3': (69.455,6.592,110.663)
C1': (70.268,7.848,108.855)
C5': (71.201,4.748,110.392)
O4': (71.203,6.820,109.131)
C8: (69.341,6.256,107.073)
O2': (70.000,8.960,110.920)
C6: (67.673,8.334,104.778)
C5: (68.362,7.635,105.786)
C4: (68.869,8.383,106.836)
P: (70.250,2.503,109.370)
C4': (70.910,6.230,110.425)
C2': (69.385,7.998,110.087)
C2: (68.087,10.258,105.996)
N1: (67.549,9.671,104.918)
N3: (68.762,9.712,107.004)
N6: (67.145,7.754,103.699)
N7: (68.661,6.290,105.953)
N9: (69.522,7.493,107.650)
O5': (70.299,4.090,109.480)
O3': (69.149,6.539,112.047)
Image (generated by PyMOL):
PyMOL image
show in jmol