Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0623:01319
Extra
PDB:
ATOM 1 O3' G A 622 48.985 124.898 84.147 1.00 33.09 O
ATOM 2 P A A 623 48.830 126.376 84.744 1.00 32.35 P
ATOM 3 OP1 A A 623 49.782 127.234 84.008 1.00 34.32 O
ATOM 4 OP2 A A 623 48.864 126.331 86.228 1.00 33.48 O
ATOM 5 O5' A A 623 47.362 126.820 84.337 1.00 35.30 O
ATOM 6 C5' A A 623 46.972 126.979 82.962 1.00 31.69 C
ATOM 7 C4' A A 623 45.476 127.083 82.887 1.00 29.48 C
ATOM 8 O4' A A 623 44.930 125.887 83.488 1.00 29.07 O
ATOM 9 C3' A A 623 44.882 128.219 83.705 1.00 30.04 C
ATOM 10 O3' A A 623 44.824 129.422 82.950 1.00 30.00 O
ATOM 11 C2' A A 623 43.497 127.697 84.028 1.00 31.08 C
ATOM 12 O2' A A 623 42.637 127.842 82.919 1.00 35.11 O
ATOM 13 C1' A A 623 43.786 126.211 84.251 1.00 32.13 C
ATOM 14 N9 A A 623 44.070 125.847 85.639 1.00 36.18 N
ATOM 15 C8 A A 623 45.129 126.251 86.419 1.00 37.20 C
ATOM 16 N7 A A 623 45.127 125.735 87.623 1.00 37.42 N
ATOM 17 C5 A A 623 43.992 124.938 87.638 1.00 37.80 C
ATOM 18 C6 A A 623 43.433 124.119 88.625 1.00 38.56 C
ATOM 19 N6 A A 623 43.968 123.950 89.832 1.00 37.71 N
ATOM 20 N1 A A 623 42.290 123.466 88.325 1.00 40.46 N
ATOM 21 C2 A A 623 41.759 123.629 87.112 1.00 39.04 C
ATOM 22 N3 A A 623 42.194 124.368 86.096 1.00 39.22 N
ATOM 23 C4 A A 623 43.327 125.005 86.427 1.00 36.73 C
ATOM 24 P G A 624 45.485 130.765 83.530 1.00 32.12 P
ATOM 25 OP1 G A 624 45.747 131.639 82.367 1.00 29.96 O
ATOM 26 OP2 G A 624 46.607 130.405 84.450 1.00 31.89 O
ATOM 27 O5' G A 624 44.328 131.436 84.395 1.00 29.97 O
TER
ATOM 1 O3' U B1318 49.462 127.049 80.409 1.00 27.60 O
ATOM 2 P C B1319 49.110 127.988 79.160 1.00 26.00 P
ATOM 3 OP1 C B1319 50.097 129.079 79.080 1.00 28.85 O
ATOM 4 OP2 C B1319 47.670 128.313 79.288 1.00 21.36 O
ATOM 5 O5' C B1319 49.357 127.071 77.882 1.00 26.82 O
ATOM 6 C5' C B1319 48.480 125.987 77.554 1.00 25.67 C
ATOM 7 C4' C B1319 48.821 125.451 76.186 1.00 26.61 C
ATOM 8 O4' C B1319 47.981 124.307 75.873 1.00 26.44 O
ATOM 9 C3' C B1319 48.603 126.445 75.059 1.00 26.48 C
ATOM 10 O3' C B1319 49.777 127.224 74.863 1.00 26.03 O
ATOM 11 C2' C B1319 48.267 125.544 73.879 1.00 25.90 C
ATOM 12 O2' C B1319 49.421 124.959 73.313 1.00 25.26 O
ATOM 13 C1' C B1319 47.444 124.448 74.570 1.00 25.65 C
ATOM 14 N1 C B1319 45.991 124.717 74.704 1.00 25.31 N
ATOM 15 C2 C B1319 45.208 124.877 73.549 1.00 24.48 C
ATOM 16 O2 C B1319 45.743 124.779 72.442 1.00 27.97 O
ATOM 17 N3 C B1319 43.890 125.125 73.675 1.00 24.30 N
ATOM 18 C4 C B1319 43.338 125.203 74.890 1.00 27.08 C
ATOM 19 N4 C B1319 42.025 125.445 74.972 1.00 23.76 N
ATOM 20 C5 C B1319 44.106 125.038 76.079 1.00 25.80 C
ATOM 21 C6 C B1319 45.413 124.803 75.941 1.00 24.01 C
ATOM 22 P C B1320 49.666 128.817 74.675 1.00 25.68 P
ATOM 23 OP1 C B1320 51.056 129.335 74.718 1.00 25.07 O
ATOM 24 OP2 C B1320 48.653 129.371 75.601 1.00 22.28 O
ATOM 25 O5' C B1320 49.093 128.976 73.204 1.00 23.56 O
TER
ATOM 2 P A A 623 48.830 126.376 84.744 1.00 32.35 P
ATOM 3 OP1 A A 623 49.782 127.234 84.008 1.00 34.32 O
ATOM 4 OP2 A A 623 48.864 126.331 86.228 1.00 33.48 O
ATOM 5 O5' A A 623 47.362 126.820 84.337 1.00 35.30 O
ATOM 6 C5' A A 623 46.972 126.979 82.962 1.00 31.69 C
ATOM 7 C4' A A 623 45.476 127.083 82.887 1.00 29.48 C
ATOM 8 O4' A A 623 44.930 125.887 83.488 1.00 29.07 O
ATOM 9 C3' A A 623 44.882 128.219 83.705 1.00 30.04 C
ATOM 10 O3' A A 623 44.824 129.422 82.950 1.00 30.00 O
ATOM 11 C2' A A 623 43.497 127.697 84.028 1.00 31.08 C
ATOM 12 O2' A A 623 42.637 127.842 82.919 1.00 35.11 O
ATOM 13 C1' A A 623 43.786 126.211 84.251 1.00 32.13 C
ATOM 14 N9 A A 623 44.070 125.847 85.639 1.00 36.18 N
ATOM 15 C8 A A 623 45.129 126.251 86.419 1.00 37.20 C
ATOM 16 N7 A A 623 45.127 125.735 87.623 1.00 37.42 N
ATOM 17 C5 A A 623 43.992 124.938 87.638 1.00 37.80 C
ATOM 18 C6 A A 623 43.433 124.119 88.625 1.00 38.56 C
ATOM 19 N6 A A 623 43.968 123.950 89.832 1.00 37.71 N
ATOM 20 N1 A A 623 42.290 123.466 88.325 1.00 40.46 N
ATOM 21 C2 A A 623 41.759 123.629 87.112 1.00 39.04 C
ATOM 22 N3 A A 623 42.194 124.368 86.096 1.00 39.22 N
ATOM 23 C4 A A 623 43.327 125.005 86.427 1.00 36.73 C
ATOM 24 P G A 624 45.485 130.765 83.530 1.00 32.12 P
ATOM 25 OP1 G A 624 45.747 131.639 82.367 1.00 29.96 O
ATOM 26 OP2 G A 624 46.607 130.405 84.450 1.00 31.89 O
ATOM 27 O5' G A 624 44.328 131.436 84.395 1.00 29.97 O
TER
ATOM 1 O3' U B1318 49.462 127.049 80.409 1.00 27.60 O
ATOM 2 P C B1319 49.110 127.988 79.160 1.00 26.00 P
ATOM 3 OP1 C B1319 50.097 129.079 79.080 1.00 28.85 O
ATOM 4 OP2 C B1319 47.670 128.313 79.288 1.00 21.36 O
ATOM 5 O5' C B1319 49.357 127.071 77.882 1.00 26.82 O
ATOM 6 C5' C B1319 48.480 125.987 77.554 1.00 25.67 C
ATOM 7 C4' C B1319 48.821 125.451 76.186 1.00 26.61 C
ATOM 8 O4' C B1319 47.981 124.307 75.873 1.00 26.44 O
ATOM 9 C3' C B1319 48.603 126.445 75.059 1.00 26.48 C
ATOM 10 O3' C B1319 49.777 127.224 74.863 1.00 26.03 O
ATOM 11 C2' C B1319 48.267 125.544 73.879 1.00 25.90 C
ATOM 12 O2' C B1319 49.421 124.959 73.313 1.00 25.26 O
ATOM 13 C1' C B1319 47.444 124.448 74.570 1.00 25.65 C
ATOM 14 N1 C B1319 45.991 124.717 74.704 1.00 25.31 N
ATOM 15 C2 C B1319 45.208 124.877 73.549 1.00 24.48 C
ATOM 16 O2 C B1319 45.743 124.779 72.442 1.00 27.97 O
ATOM 17 N3 C B1319 43.890 125.125 73.675 1.00 24.30 N
ATOM 18 C4 C B1319 43.338 125.203 74.890 1.00 27.08 C
ATOM 19 N4 C B1319 42.025 125.445 74.972 1.00 23.76 N
ATOM 20 C5 C B1319 44.106 125.038 76.079 1.00 25.80 C
ATOM 21 C6 C B1319 45.413 124.803 75.941 1.00 24.01 C
ATOM 22 P C B1320 49.666 128.817 74.675 1.00 25.68 P
ATOM 23 OP1 C B1320 51.056 129.335 74.718 1.00 25.07 O
ATOM 24 OP2 C B1320 48.653 129.371 75.601 1.00 22.28 O
ATOM 25 O5' C B1320 49.093 128.976 73.204 1.00 23.56 O
TER
Atoms:
OP1: (49.782,127.234,84.008)
OP2: (48.864,126.331,86.228)
C3': (44.882,128.219,83.705)
C1': (43.786,126.211,84.251)
C5': (46.972,126.979,82.962)
O4': (44.930,125.887,83.488)
C8: (45.129,126.251,86.419)
O2': (42.637,127.842,82.919)
C6: (43.433,124.119,88.625)
C5: (43.992,124.938,87.638)
C4: (43.327,125.005,86.427)
P: (48.830,126.376,84.744)
C4': (45.476,127.083,82.887)
C2': (43.497,127.697,84.028)
C2: (41.759,123.629,87.112)
N1: (42.290,123.466,88.325)
N3: (42.194,124.368,86.096)
N6: (43.968,123.950,89.832)
N7: (45.127,125.735,87.623)
N9: (44.070,125.847,85.639)
O5': (47.362,126.820,84.337)
O3': (44.824,129.422,82.950)
OP2: (48.864,126.331,86.228)
C3': (44.882,128.219,83.705)
C1': (43.786,126.211,84.251)
C5': (46.972,126.979,82.962)
O4': (44.930,125.887,83.488)
C8: (45.129,126.251,86.419)
O2': (42.637,127.842,82.919)
C6: (43.433,124.119,88.625)
C5: (43.992,124.938,87.638)
C4: (43.327,125.005,86.427)
P: (48.830,126.376,84.744)
C4': (45.476,127.083,82.887)
C2': (43.497,127.697,84.028)
C2: (41.759,123.629,87.112)
N1: (42.290,123.466,88.325)
N3: (42.194,124.368,86.096)
N6: (43.968,123.950,89.832)
N7: (45.127,125.735,87.623)
N9: (44.070,125.847,85.639)
O5': (47.362,126.820,84.337)
O3': (44.824,129.422,82.950)
C2: (45.208,124.877,73.549)
OP1: (50.097,129.079,79.080)
OP2: (47.670,128.313,79.288)
C4: (43.338,125.203,74.890)
O5': (49.357,127.071,77.882)
C3': (48.603,126.445,75.059)
C1': (47.444,124.448,74.570)
O4': (47.981,124.307,75.873)
C5': (48.480,125.987,77.554)
P: (49.110,127.988,79.160)
O2: (45.743,124.779,72.442)
C4': (48.821,125.451,76.186)
C2': (48.267,125.544,73.879)
O2': (49.421,124.959,73.313)
N1: (45.991,124.717,74.704)
N3: (43.890,125.125,73.675)
N4: (42.025,125.445,74.972)
C6: (45.413,124.803,75.941)
C5: (44.106,125.038,76.079)
O3': (49.777,127.224,74.863)
OP1: (50.097,129.079,79.080)
OP2: (47.670,128.313,79.288)
C4: (43.338,125.203,74.890)
O5': (49.357,127.071,77.882)
C3': (48.603,126.445,75.059)
C1': (47.444,124.448,74.570)
O4': (47.981,124.307,75.873)
C5': (48.480,125.987,77.554)
P: (49.110,127.988,79.160)
O2: (45.743,124.779,72.442)
C4': (48.821,125.451,76.186)
C2': (48.267,125.544,73.879)
O2': (49.421,124.959,73.313)
N1: (45.991,124.717,74.704)
N3: (43.890,125.125,73.675)
N4: (42.025,125.445,74.972)
C6: (45.413,124.803,75.941)
C5: (44.106,125.038,76.079)
O3': (49.777,127.224,74.863)
Image (generated by PyMOL):