Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02405:02349
Extra
PDB:
ATOM 1 O3' U A2404 72.112 108.356 159.083 1.00 65.47 O
ATOM 2 P G A2405 72.903 108.609 160.460 1.00 65.41 P
ATOM 3 OP1 G A2405 72.378 107.613 161.422 1.00 65.41 O
ATOM 4 OP2 G A2405 72.850 110.056 160.808 1.00 66.54 O
ATOM 5 O5' G A2405 74.396 108.196 160.082 1.00 64.83 O
ATOM 6 C5' G A2405 75.532 108.990 160.481 1.00 65.36 C
ATOM 7 C4' G A2405 76.558 109.017 159.372 1.00 66.35 C
ATOM 8 O4' G A2405 77.003 107.671 159.066 1.00 66.03 O
ATOM 9 C3' G A2405 76.054 109.609 158.066 1.00 67.67 C
ATOM 10 O3' G A2405 76.416 110.990 158.029 1.00 70.18 O
ATOM 11 C2' G A2405 76.782 108.790 157.005 1.00 67.06 C
ATOM 12 O2' G A2405 78.097 109.256 156.790 1.00 67.05 O
ATOM 13 C1' G A2405 76.869 107.420 157.681 1.00 66.26 C
ATOM 14 N9 G A2405 75.754 106.487 157.528 1.00 66.61 N
ATOM 15 C8 G A2405 74.413 106.751 157.682 1.00 66.61 C
ATOM 16 N7 G A2405 73.673 105.675 157.656 1.00 67.20 N
ATOM 17 C5 G A2405 74.574 104.641 157.435 1.00 66.54 C
ATOM 18 C6 G A2405 74.364 103.232 157.354 1.00 66.48 C
ATOM 19 O6 G A2405 73.312 102.594 157.501 1.00 65.69 O
ATOM 20 N1 G A2405 75.550 102.556 157.100 1.00 66.56 N
ATOM 21 C2 G A2405 76.782 103.146 156.965 1.00 67.05 C
ATOM 22 N2 G A2405 77.809 102.317 156.724 1.00 67.32 N
ATOM 23 N3 G A2405 76.994 104.450 157.062 1.00 66.46 N
ATOM 24 C4 G A2405 75.855 105.131 157.300 1.00 66.23 C
ATOM 25 P C A2406 75.419 112.076 157.390 1.00 71.20 P
ATOM 26 OP1 C A2406 74.938 111.523 156.103 1.00 72.98 O
ATOM 27 OP2 C A2406 76.112 113.393 157.420 1.00 69.62 O
ATOM 28 O5' C A2406 74.176 112.139 158.387 1.00 71.92 O
TER
ATOM 1 O3' G B2348 82.333 101.682 154.614 1.00 95.88 O
ATOM 2 P C B2349 82.361 101.667 156.229 1.00 97.98 P
ATOM 3 OP1 C B2349 81.041 102.113 156.734 1.00 97.75 O
ATOM 4 OP2 C B2349 83.581 102.405 156.630 1.00 98.98 O
ATOM 5 O5' C B2349 82.567 100.140 156.640 1.00101.83 O
ATOM 6 C5' C B2349 83.807 99.454 156.363 1.00108.18 C
ATOM 7 C4' C B2349 84.339 98.775 157.613 1.00112.52 C
ATOM 8 O4' C B2349 84.688 99.765 158.612 1.00114.89 O
ATOM 9 C3' C B2349 83.381 97.876 158.383 1.00114.28 C
ATOM 10 O3' C B2349 83.277 96.589 157.767 1.00113.62 O
ATOM 11 C2' C B2349 84.068 97.760 159.748 1.00116.15 C
ATOM 12 O2' C B2349 85.042 96.733 159.800 1.00117.51 O
ATOM 13 C1' C B2349 84.783 99.114 159.869 1.00117.53 C
ATOM 14 N1 C B2349 84.300 100.008 160.945 1.00120.07 N
ATOM 15 C2 C B2349 84.925 99.948 162.212 1.00121.09 C
ATOM 16 O2 C B2349 85.869 99.156 162.390 1.00121.54 O
ATOM 17 N3 C B2349 84.484 100.754 163.206 1.00121.62 N
ATOM 18 C4 C B2349 83.472 101.597 162.984 1.00121.75 C
ATOM 19 N4 C B2349 83.069 102.372 163.998 1.00121.71 N
ATOM 20 C5 C B2349 82.826 101.684 161.713 1.00121.53 C
ATOM 21 C6 C B2349 83.267 100.880 160.733 1.00121.06 C
ATOM 22 P A B2350 81.884 95.786 157.806 1.00112.51 P
ATOM 23 OP1 A B2350 82.153 94.400 157.335 1.00112.08 O
ATOM 24 OP2 A B2350 80.873 96.610 157.103 1.00113.71 O
ATOM 25 O5' A B2350 81.502 95.735 159.351 1.00110.97 O
TER
ATOM 2 P G A2405 72.903 108.609 160.460 1.00 65.41 P
ATOM 3 OP1 G A2405 72.378 107.613 161.422 1.00 65.41 O
ATOM 4 OP2 G A2405 72.850 110.056 160.808 1.00 66.54 O
ATOM 5 O5' G A2405 74.396 108.196 160.082 1.00 64.83 O
ATOM 6 C5' G A2405 75.532 108.990 160.481 1.00 65.36 C
ATOM 7 C4' G A2405 76.558 109.017 159.372 1.00 66.35 C
ATOM 8 O4' G A2405 77.003 107.671 159.066 1.00 66.03 O
ATOM 9 C3' G A2405 76.054 109.609 158.066 1.00 67.67 C
ATOM 10 O3' G A2405 76.416 110.990 158.029 1.00 70.18 O
ATOM 11 C2' G A2405 76.782 108.790 157.005 1.00 67.06 C
ATOM 12 O2' G A2405 78.097 109.256 156.790 1.00 67.05 O
ATOM 13 C1' G A2405 76.869 107.420 157.681 1.00 66.26 C
ATOM 14 N9 G A2405 75.754 106.487 157.528 1.00 66.61 N
ATOM 15 C8 G A2405 74.413 106.751 157.682 1.00 66.61 C
ATOM 16 N7 G A2405 73.673 105.675 157.656 1.00 67.20 N
ATOM 17 C5 G A2405 74.574 104.641 157.435 1.00 66.54 C
ATOM 18 C6 G A2405 74.364 103.232 157.354 1.00 66.48 C
ATOM 19 O6 G A2405 73.312 102.594 157.501 1.00 65.69 O
ATOM 20 N1 G A2405 75.550 102.556 157.100 1.00 66.56 N
ATOM 21 C2 G A2405 76.782 103.146 156.965 1.00 67.05 C
ATOM 22 N2 G A2405 77.809 102.317 156.724 1.00 67.32 N
ATOM 23 N3 G A2405 76.994 104.450 157.062 1.00 66.46 N
ATOM 24 C4 G A2405 75.855 105.131 157.300 1.00 66.23 C
ATOM 25 P C A2406 75.419 112.076 157.390 1.00 71.20 P
ATOM 26 OP1 C A2406 74.938 111.523 156.103 1.00 72.98 O
ATOM 27 OP2 C A2406 76.112 113.393 157.420 1.00 69.62 O
ATOM 28 O5' C A2406 74.176 112.139 158.387 1.00 71.92 O
TER
ATOM 1 O3' G B2348 82.333 101.682 154.614 1.00 95.88 O
ATOM 2 P C B2349 82.361 101.667 156.229 1.00 97.98 P
ATOM 3 OP1 C B2349 81.041 102.113 156.734 1.00 97.75 O
ATOM 4 OP2 C B2349 83.581 102.405 156.630 1.00 98.98 O
ATOM 5 O5' C B2349 82.567 100.140 156.640 1.00101.83 O
ATOM 6 C5' C B2349 83.807 99.454 156.363 1.00108.18 C
ATOM 7 C4' C B2349 84.339 98.775 157.613 1.00112.52 C
ATOM 8 O4' C B2349 84.688 99.765 158.612 1.00114.89 O
ATOM 9 C3' C B2349 83.381 97.876 158.383 1.00114.28 C
ATOM 10 O3' C B2349 83.277 96.589 157.767 1.00113.62 O
ATOM 11 C2' C B2349 84.068 97.760 159.748 1.00116.15 C
ATOM 12 O2' C B2349 85.042 96.733 159.800 1.00117.51 O
ATOM 13 C1' C B2349 84.783 99.114 159.869 1.00117.53 C
ATOM 14 N1 C B2349 84.300 100.008 160.945 1.00120.07 N
ATOM 15 C2 C B2349 84.925 99.948 162.212 1.00121.09 C
ATOM 16 O2 C B2349 85.869 99.156 162.390 1.00121.54 O
ATOM 17 N3 C B2349 84.484 100.754 163.206 1.00121.62 N
ATOM 18 C4 C B2349 83.472 101.597 162.984 1.00121.75 C
ATOM 19 N4 C B2349 83.069 102.372 163.998 1.00121.71 N
ATOM 20 C5 C B2349 82.826 101.684 161.713 1.00121.53 C
ATOM 21 C6 C B2349 83.267 100.880 160.733 1.00121.06 C
ATOM 22 P A B2350 81.884 95.786 157.806 1.00112.51 P
ATOM 23 OP1 A B2350 82.153 94.400 157.335 1.00112.08 O
ATOM 24 OP2 A B2350 80.873 96.610 157.103 1.00113.71 O
ATOM 25 O5' A B2350 81.502 95.735 159.351 1.00110.97 O
TER
Atoms:
OP1: (72.378,107.613,161.422)
OP2: (72.850,110.056,160.808)
C3': (76.054,109.609,158.066)
C1': (76.869,107.420,157.681)
C5': (75.532,108.990,160.481)
O6: (73.312,102.594,157.501)
O4': (77.003,107.671,159.066)
C8: (74.413,106.751,157.682)
C2: (76.782,103.146,156.965)
C6: (74.364,103.232,157.354)
C5: (74.574,104.641,157.435)
C4: (75.855,105.131,157.300)
P: (72.903,108.609,160.460)
C4': (76.558,109.017,159.372)
C2': (76.782,108.790,157.005)
O2': (78.097,109.256,156.790)
N1: (75.550,102.556,157.100)
N2: (77.809,102.317,156.724)
N3: (76.994,104.450,157.062)
N7: (73.673,105.675,157.656)
N9: (75.754,106.487,157.528)
O5': (74.396,108.196,160.082)
O3': (76.416,110.990,158.029)
OP2: (72.850,110.056,160.808)
C3': (76.054,109.609,158.066)
C1': (76.869,107.420,157.681)
C5': (75.532,108.990,160.481)
O6: (73.312,102.594,157.501)
O4': (77.003,107.671,159.066)
C8: (74.413,106.751,157.682)
C2: (76.782,103.146,156.965)
C6: (74.364,103.232,157.354)
C5: (74.574,104.641,157.435)
C4: (75.855,105.131,157.300)
P: (72.903,108.609,160.460)
C4': (76.558,109.017,159.372)
C2': (76.782,108.790,157.005)
O2': (78.097,109.256,156.790)
N1: (75.550,102.556,157.100)
N2: (77.809,102.317,156.724)
N3: (76.994,104.450,157.062)
N7: (73.673,105.675,157.656)
N9: (75.754,106.487,157.528)
O5': (74.396,108.196,160.082)
O3': (76.416,110.990,158.029)
C2: (84.925,99.948,162.212)
OP1: (81.041,102.113,156.734)
OP2: (83.581,102.405,156.630)
C4: (83.472,101.597,162.984)
O5': (82.567,100.140,156.640)
C3': (83.381,97.876,158.383)
C1': (84.783,99.114,159.869)
O4': (84.688,99.765,158.612)
C5': (83.807,99.454,156.363)
P: (82.361,101.667,156.229)
O2: (85.869,99.156,162.390)
C4': (84.339,98.775,157.613)
C2': (84.068,97.760,159.748)
O2': (85.042,96.733,159.800)
N1: (84.300,100.008,160.945)
N3: (84.484,100.754,163.206)
N4: (83.069,102.372,163.998)
C6: (83.267,100.880,160.733)
C5: (82.826,101.684,161.713)
O3': (83.277,96.589,157.767)
OP1: (81.041,102.113,156.734)
OP2: (83.581,102.405,156.630)
C4: (83.472,101.597,162.984)
O5': (82.567,100.140,156.640)
C3': (83.381,97.876,158.383)
C1': (84.783,99.114,159.869)
O4': (84.688,99.765,158.612)
C5': (83.807,99.454,156.363)
P: (82.361,101.667,156.229)
O2: (85.869,99.156,162.390)
C4': (84.339,98.775,157.613)
C2': (84.068,97.760,159.748)
O2': (85.042,96.733,159.800)
N1: (84.300,100.008,160.945)
N3: (84.484,100.754,163.206)
N4: (83.069,102.372,163.998)
C6: (83.267,100.880,160.733)
C5: (82.826,101.684,161.713)
O3': (83.277,96.589,157.767)
Image (generated by PyMOL):