ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1FFK:01039:0613

Extra

PDB:
ATOM 1 O3' C A1038 37.037 106.443 102.757 1.00 36.48 O
ATOM 2 P A A1039 38.241 106.762 101.751 1.00 37.29 P
ATOM 3 OP1 A A1039 39.474 107.031 102.536 1.00 38.08 O
ATOM 4 OP2 A A1039 37.735 107.795 100.801 1.00 37.80 O
ATOM 5 O5' A A1039 38.443 105.420 100.920 1.00 33.57 O
ATOM 6 C5' A A1039 38.667 104.167 101.559 1.00 28.92 C
ATOM 7 C4' A A1039 38.595 103.074 100.529 1.00 27.28 C
ATOM 8 O4' A A1039 39.588 103.308 99.509 1.00 25.77 O
ATOM 9 C3' A A1039 38.843 101.660 101.010 1.00 25.93 C
ATOM 10 O3' A A1039 37.609 101.125 101.458 1.00 25.44 O
ATOM 11 C2' A A1039 39.299 100.960 99.737 1.00 25.36 C
ATOM 12 O2' A A1039 38.202 100.611 98.930 1.00 26.82 O
ATOM 13 C1' A A1039 40.052 102.074 99.011 1.00 24.81 C
ATOM 14 N9 A A1039 41.506 102.047 99.150 1.00 23.52 N
ATOM 15 C8 A A1039 42.261 102.672 100.104 1.00 24.40 C
ATOM 16 N7 A A1039 43.549 102.533 99.933 1.00 24.75 N
ATOM 17 C5 A A1039 43.649 101.748 98.797 1.00 22.46 C
ATOM 18 C6 A A1039 44.752 101.254 98.088 1.00 20.91 C
ATOM 19 N6 A A1039 46.016 101.502 98.419 1.00 21.47 N
ATOM 20 N1 A A1039 44.509 100.487 97.011 1.00 20.01 N
ATOM 21 C2 A A1039 43.242 100.246 96.672 1.00 21.10 C
ATOM 22 N3 A A1039 42.126 100.661 97.249 1.00 22.23 N
ATOM 23 C4 A A1039 42.400 101.420 98.319 1.00 22.15 C
ATOM 24 P A A1040 37.442 100.654 102.978 1.00 22.77 P
ATOM 25 OP1 A A1040 36.013 100.803 103.283 1.00 22.23 O
ATOM 26 OP2 A A1040 38.439 101.317 103.832 1.00 23.46 O
ATOM 27 O5' A A1040 37.780 99.106 102.915 1.00 23.71 O
TER

ATOM 1 O3' U B 612 50.677 103.591 90.323 1.00 21.20 O
ATOM 2 P U B 613 50.197 102.102 89.977 1.00 18.79 P
ATOM 3 OP1 U B 613 51.359 101.200 90.035 1.00 20.55 O
ATOM 4 OP2 U B 613 49.390 102.171 88.752 1.00 20.47 O
ATOM 5 O5' U B 613 49.210 101.721 91.159 1.00 21.51 O
ATOM 6 C5' U B 613 48.402 100.535 91.083 1.00 20.61 C
ATOM 7 C4' U B 613 47.758 100.259 92.413 1.00 19.33 C
ATOM 8 O4' U B 613 48.773 99.914 93.383 1.00 20.21 O
ATOM 9 C3' U B 613 47.015 101.425 93.035 1.00 19.07 C
ATOM 10 O3' U B 613 45.691 101.505 92.534 1.00 19.69 O
ATOM 11 C2' U B 613 47.040 101.088 94.519 1.00 18.75 C
ATOM 12 O2' U B 613 46.028 100.185 94.878 1.00 18.53 O
ATOM 13 C1' U B 613 48.382 100.373 94.662 1.00 19.42 C
ATOM 14 N1 U B 613 49.456 101.208 95.221 1.00 20.91 N
ATOM 15 C2 U B 613 49.461 101.422 96.587 1.00 19.34 C
ATOM 16 O2 U B 613 48.600 100.992 97.326 1.00 20.07 O
ATOM 17 N3 U B 613 50.512 102.165 97.054 1.00 19.51 N
ATOM 18 C4 U B 613 51.534 102.712 96.315 1.00 20.85 C
ATOM 19 O4 U B 613 52.450 103.293 96.893 1.00 21.85 O
ATOM 20 C5 U B 613 51.446 102.478 94.909 1.00 21.86 C
ATOM 21 C6 U B 613 50.437 101.752 94.421 1.00 22.79 C
ATOM 22 P G B 614 45.082 102.927 92.128 1.00 18.95 P
ATOM 23 OP1 G B 614 43.728 102.700 91.595 1.00 22.95 O
ATOM 24 OP2 G B 614 46.077 103.632 91.302 1.00 19.52 O
ATOM 25 O5' G B 614 44.923 103.695 93.507 1.00 20.31 O
TER

Atoms:
OP1: (39.474,107.031,102.536)
OP2: (37.735,107.795,100.801)
C3': (38.843,101.660,101.010)
C1': (40.052,102.074,99.011)
C5': (38.667,104.167,101.559)
O4': (39.588,103.308,99.509)
C8: (42.261,102.672,100.104)
O2': (38.202,100.611,98.930)
C6: (44.752,101.254,98.088)
C5: (43.649,101.748,98.797)
C4: (42.400,101.420,98.319)
P: (38.241,106.762,101.751)
C4': (38.595,103.074,100.529)
C2': (39.299,100.960,99.737)
C2: (43.242,100.246,96.672)
N1: (44.509,100.487,97.011)
N3: (42.126,100.661,97.249)
N6: (46.016,101.502,98.419)
N7: (43.549,102.533,99.933)
N9: (41.506,102.047,99.150)
O5': (38.443,105.420,100.920)
O3': (37.609,101.125,101.458)
C4: (51.534,102.712,96.315)
N3: (50.512,102.165,97.054)
OP1: (51.359,101.200,90.035)
OP2: (49.390,102.171,88.752)
C2: (49.461,101.422,96.587)
C1': (48.382,100.373,94.662)
C3': (47.015,101.425,93.035)
O5': (49.210,101.721,91.159)
O4': (48.773,99.914,93.383)
C5': (48.402,100.535,91.083)
P: (50.197,102.102,89.977)
C4': (47.758,100.259,92.413)
C2': (47.040,101.088,94.519)
O2': (46.028,100.185,94.878)
N1: (49.456,101.208,95.221)
O4: (52.450,103.293,96.893)
O2: (48.600,100.992,97.326)
C6: (50.437,101.752,94.421)
C5: (51.446,102.478,94.909)
O3': (45.691,101.505,92.534)
Image (generated by PyMOL):
PyMOL image
show in jmol