ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:955:953

Extra

PDB:
ATOM 1 O3' U A 54 65.892 11.397 113.325 1.00 70.21 O
ATOM 2 P A A 55 66.302 11.682 114.852 1.00 70.70 P
ATOM 3 OP1 A A 55 66.102 10.424 115.616 1.00 72.07 O
ATOM 4 OP2 A A 55 65.629 12.927 115.303 1.00 70.18 O
ATOM 5 O5' A A 55 67.871 11.947 114.781 1.00 68.50 O
ATOM 6 C5' A A 55 68.593 12.427 115.933 1.00 66.02 C
ATOM 7 C4' A A 55 69.741 13.313 115.501 1.00 64.64 C
ATOM 8 O4' A A 55 70.661 12.545 114.681 1.00 63.64 O
ATOM 9 C3' A A 55 69.362 14.500 114.629 1.00 62.89 C
ATOM 10 O3' A A 55 68.926 15.604 115.420 1.00 62.07 O
ATOM 11 C2' A A 55 70.664 14.786 113.894 1.00 62.05 C
ATOM 12 O2' A A 55 71.590 15.488 114.698 1.00 61.85 O
ATOM 13 C1' A A 55 71.194 13.371 113.655 1.00 61.86 C
ATOM 14 N9 A A 55 70.824 12.792 112.360 1.00 60.35 N
ATOM 15 C8 A A 55 69.941 11.764 112.126 1.00 60.02 C
ATOM 16 N7 A A 55 69.829 11.438 110.863 1.00 58.84 N
ATOM 17 C5 A A 55 70.690 12.311 110.216 1.00 57.97 C
ATOM 18 C6 A A 55 71.025 12.471 108.865 1.00 56.60 C
ATOM 19 N6 A A 55 70.513 11.724 107.884 1.00 55.74 N
ATOM 20 N1 A A 55 71.915 13.435 108.548 1.00 55.80 N
ATOM 21 C2 A A 55 72.428 14.181 109.534 1.00 56.46 C
ATOM 22 N3 A A 55 72.194 14.126 110.842 1.00 57.86 N
ATOM 23 C4 A A 55 71.305 13.157 111.123 1.00 58.95 C
ATOM 24 P A A 56 67.668 16.488 114.940 1.00 63.14 P
ATOM 25 OP1 A A 56 67.192 17.279 116.104 1.00 62.03 O
ATOM 26 OP2 A A 56 66.724 15.583 114.230 1.00 62.24 O
ATOM 27 O5' A A 56 68.283 17.498 113.869 1.00 64.22 O
TER

ATOM 1 O3' G B 52 71.839 1.590 108.727 1.00 76.91 O
ATOM 2 P A B 53 70.378 1.922 109.300 1.00 76.84 P
ATOM 3 OP1 A B 53 70.278 1.325 110.658 1.00 77.88 O
ATOM 4 OP2 A B 53 69.373 1.566 108.263 1.00 75.40 O
ATOM 5 O5' A B 53 70.387 3.504 109.465 1.00 76.65 O
ATOM 6 C5' A B 53 71.258 4.145 110.416 1.00 74.95 C
ATOM 7 C4' A B 53 70.986 5.630 110.446 1.00 73.83 C
ATOM 8 O4' A B 53 71.337 6.215 109.164 1.00 73.54 O
ATOM 9 C3' A B 53 69.530 6.020 110.632 1.00 72.98 C
ATOM 10 O3' A B 53 69.143 5.956 112.001 1.00 73.69 O
ATOM 11 C2' A B 53 69.508 7.431 110.061 1.00 71.98 C
ATOM 12 O2' A B 53 70.084 8.373 110.940 1.00 71.23 O
ATOM 13 C1' A B 53 70.446 7.277 108.863 1.00 71.84 C
ATOM 14 N9 A B 53 69.767 6.979 107.599 1.00 70.78 N
ATOM 15 C8 A B 53 69.648 5.770 106.956 1.00 70.48 C
ATOM 16 N7 A B 53 68.999 5.835 105.817 1.00 70.16 N
ATOM 17 C5 A B 53 68.662 7.177 105.703 1.00 70.70 C
ATOM 18 C6 A B 53 67.963 7.901 104.713 1.00 70.17 C
ATOM 19 N6 A B 53 67.464 7.353 103.603 1.00 68.85 N
ATOM 20 N1 A B 53 67.796 9.227 104.907 1.00 69.93 N
ATOM 21 C2 A B 53 68.297 9.782 106.019 1.00 70.43 C
ATOM 22 N3 A B 53 68.969 9.211 107.018 1.00 71.89 N
ATOM 23 C4 A B 53 69.121 7.892 106.797 1.00 71.22 C
ATOM 24 P U B 54 67.588 5.791 112.386 1.00 74.30 P
ATOM 25 OP1 U B 54 67.543 5.337 113.800 1.00 73.72 O
ATOM 26 OP2 U B 54 66.903 4.995 111.328 1.00 73.55 O
ATOM 27 O5' U B 54 67.020 7.278 112.335 1.00 74.52 O
TER

Atoms:
OP1: (66.102,10.424,115.616)
OP2: (65.629,12.927,115.303)
C3': (69.362,14.500,114.629)
C1': (71.194,13.371,113.655)
C5': (68.593,12.427,115.933)
O4': (70.661,12.545,114.681)
C8: (69.941,11.764,112.126)
O2': (71.590,15.488,114.698)
C6: (71.025,12.471,108.865)
C5: (70.690,12.311,110.216)
C4: (71.305,13.157,111.123)
P: (66.302,11.682,114.852)
C4': (69.741,13.313,115.501)
C2': (70.664,14.786,113.894)
C2: (72.428,14.181,109.534)
N1: (71.915,13.435,108.548)
N3: (72.194,14.126,110.842)
N6: (70.513,11.724,107.884)
N7: (69.829,11.438,110.863)
N9: (70.824,12.792,112.360)
O5': (67.871,11.947,114.781)
O3': (68.926,15.604,115.420)
OP1: (70.278,1.325,110.658)
OP2: (69.373,1.566,108.263)
C3': (69.530,6.020,110.632)
C1': (70.446,7.277,108.863)
C5': (71.258,4.145,110.416)
O4': (71.337,6.215,109.164)
C8: (69.648,5.770,106.956)
O2': (70.084,8.373,110.940)
C6: (67.963,7.901,104.713)
C5: (68.662,7.177,105.703)
C4: (69.121,7.892,106.797)
P: (70.378,1.922,109.300)
C4': (70.986,5.630,110.446)
C2': (69.508,7.431,110.061)
C2: (68.297,9.782,106.019)
N1: (67.796,9.227,104.907)
N3: (68.969,9.211,107.018)
N6: (67.464,7.353,103.603)
N7: (68.999,5.835,105.817)
N9: (69.767,6.979,107.599)
O5': (70.387,3.504,109.465)
O3': (69.143,5.956,112.001)
Image (generated by PyMOL):
PyMOL image
show in jmol