Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1815:A2092
Extra
PDB:
ATOM 1 O3' C A1814 118.916 128.042 53.098 1.00 54.60 O
ATOM 2 P A A1815 119.247 127.747 51.551 1.00 57.01 P
ATOM 3 OP1 A A1815 120.596 127.143 51.494 1.00 55.83 O
ATOM 4 OP2 A A1815 118.953 128.972 50.741 1.00 57.25 O
ATOM 5 O5' A A1815 118.219 126.603 51.132 1.00 57.73 O
ATOM 6 C5' A A1815 116.796 126.822 51.181 1.00 58.46 C
ATOM 7 C4' A A1815 116.057 125.514 50.997 1.00 58.32 C
ATOM 8 O4' A A1815 116.361 124.991 49.673 1.00 58.60 O
ATOM 9 C3' A A1815 116.416 124.405 51.989 1.00 57.94 C
ATOM 10 O3' A A1815 115.263 123.598 52.260 1.00 56.88 O
ATOM 11 C2' A A1815 117.423 123.575 51.193 1.00 58.90 C
ATOM 12 O2' A A1815 117.486 122.245 51.660 1.00 58.51 O
ATOM 13 C1' A A1815 116.809 123.660 49.794 1.00 59.99 C
ATOM 14 N9 A A1815 117.619 123.329 48.615 1.00 62.99 N
ATOM 15 C8 A A1815 118.960 123.551 48.383 1.00 65.24 C
ATOM 16 N7 A A1815 119.364 123.156 47.195 1.00 65.77 N
ATOM 17 C5 A A1815 118.218 122.631 46.607 1.00 65.41 C
ATOM 18 C6 A A1815 117.975 122.049 45.336 1.00 66.23 C
ATOM 19 N6 A A1815 118.904 121.897 44.383 1.00 66.12 N
ATOM 20 N1 A A1815 116.721 121.629 45.071 1.00 65.81 N
ATOM 21 C2 A A1815 115.778 121.788 46.012 1.00 64.70 C
ATOM 22 N3 A A1815 115.878 122.321 47.232 1.00 63.86 N
ATOM 23 C4 A A1815 117.138 122.727 47.472 1.00 63.79 C
ATOM 24 P A A1816 114.284 123.965 53.491 1.00 54.64 P
ATOM 25 OP1 A A1816 113.131 123.010 53.495 1.00 54.75 O
ATOM 26 OP2 A A1816 114.026 125.415 53.390 1.00 54.99 O
ATOM 27 O5' A A1816 115.158 123.705 54.793 1.00 51.68 O
TER
ATOM 1 O3' C B2091 111.480 119.587 36.929 1.00 62.94 O
ATOM 2 P U B2092 111.719 121.139 37.282 1.00 63.62 P
ATOM 3 OP1 U B2092 110.373 121.661 37.650 1.00 64.18 O
ATOM 4 OP2 U B2092 112.474 121.787 36.180 1.00 62.98 O
ATOM 5 O5' U B2092 112.657 121.127 38.576 1.00 64.68 O
ATOM 6 C5' U B2092 112.185 120.584 39.821 1.00 67.94 C
ATOM 7 C4' U B2092 113.229 120.733 40.905 1.00 71.56 C
ATOM 8 O4' U B2092 114.325 119.805 40.699 1.00 73.06 O
ATOM 9 C3' U B2092 113.884 122.094 41.052 1.00 72.26 C
ATOM 10 O3' U B2092 113.057 122.964 41.813 1.00 73.40 O
ATOM 11 C2' U B2092 115.181 121.749 41.776 1.00 73.13 C
ATOM 12 O2' U B2092 114.999 121.575 43.162 1.00 73.14 O
ATOM 13 C1' U B2092 115.535 120.394 41.151 1.00 73.75 C
ATOM 14 N1 U B2092 116.470 120.476 40.014 1.00 75.00 N
ATOM 15 C2 U B2092 117.832 120.372 40.272 1.00 76.77 C
ATOM 16 O2 U B2092 118.298 120.217 41.391 1.00 78.30 O
ATOM 17 N3 U B2092 118.638 120.450 39.164 1.00 77.45 N
ATOM 18 C4 U B2092 118.242 120.608 37.857 1.00 76.65 C
ATOM 19 O4 U B2092 119.099 120.630 36.968 1.00 77.30 O
ATOM 20 C5 U B2092 116.827 120.711 37.672 1.00 75.46 C
ATOM 21 C6 U B2092 116.013 120.646 38.729 1.00 74.63 C
ATOM 22 P C B2093 113.056 124.538 41.507 1.00 74.61 P
ATOM 23 OP1 C B2093 111.891 125.091 42.239 1.00 74.62 O
ATOM 24 OP2 C B2093 113.149 124.732 40.036 1.00 74.74 O
ATOM 25 O5' C B2093 114.391 125.044 42.225 1.00 76.35 O
TER
ATOM 2 P A A1815 119.247 127.747 51.551 1.00 57.01 P
ATOM 3 OP1 A A1815 120.596 127.143 51.494 1.00 55.83 O
ATOM 4 OP2 A A1815 118.953 128.972 50.741 1.00 57.25 O
ATOM 5 O5' A A1815 118.219 126.603 51.132 1.00 57.73 O
ATOM 6 C5' A A1815 116.796 126.822 51.181 1.00 58.46 C
ATOM 7 C4' A A1815 116.057 125.514 50.997 1.00 58.32 C
ATOM 8 O4' A A1815 116.361 124.991 49.673 1.00 58.60 O
ATOM 9 C3' A A1815 116.416 124.405 51.989 1.00 57.94 C
ATOM 10 O3' A A1815 115.263 123.598 52.260 1.00 56.88 O
ATOM 11 C2' A A1815 117.423 123.575 51.193 1.00 58.90 C
ATOM 12 O2' A A1815 117.486 122.245 51.660 1.00 58.51 O
ATOM 13 C1' A A1815 116.809 123.660 49.794 1.00 59.99 C
ATOM 14 N9 A A1815 117.619 123.329 48.615 1.00 62.99 N
ATOM 15 C8 A A1815 118.960 123.551 48.383 1.00 65.24 C
ATOM 16 N7 A A1815 119.364 123.156 47.195 1.00 65.77 N
ATOM 17 C5 A A1815 118.218 122.631 46.607 1.00 65.41 C
ATOM 18 C6 A A1815 117.975 122.049 45.336 1.00 66.23 C
ATOM 19 N6 A A1815 118.904 121.897 44.383 1.00 66.12 N
ATOM 20 N1 A A1815 116.721 121.629 45.071 1.00 65.81 N
ATOM 21 C2 A A1815 115.778 121.788 46.012 1.00 64.70 C
ATOM 22 N3 A A1815 115.878 122.321 47.232 1.00 63.86 N
ATOM 23 C4 A A1815 117.138 122.727 47.472 1.00 63.79 C
ATOM 24 P A A1816 114.284 123.965 53.491 1.00 54.64 P
ATOM 25 OP1 A A1816 113.131 123.010 53.495 1.00 54.75 O
ATOM 26 OP2 A A1816 114.026 125.415 53.390 1.00 54.99 O
ATOM 27 O5' A A1816 115.158 123.705 54.793 1.00 51.68 O
TER
ATOM 1 O3' C B2091 111.480 119.587 36.929 1.00 62.94 O
ATOM 2 P U B2092 111.719 121.139 37.282 1.00 63.62 P
ATOM 3 OP1 U B2092 110.373 121.661 37.650 1.00 64.18 O
ATOM 4 OP2 U B2092 112.474 121.787 36.180 1.00 62.98 O
ATOM 5 O5' U B2092 112.657 121.127 38.576 1.00 64.68 O
ATOM 6 C5' U B2092 112.185 120.584 39.821 1.00 67.94 C
ATOM 7 C4' U B2092 113.229 120.733 40.905 1.00 71.56 C
ATOM 8 O4' U B2092 114.325 119.805 40.699 1.00 73.06 O
ATOM 9 C3' U B2092 113.884 122.094 41.052 1.00 72.26 C
ATOM 10 O3' U B2092 113.057 122.964 41.813 1.00 73.40 O
ATOM 11 C2' U B2092 115.181 121.749 41.776 1.00 73.13 C
ATOM 12 O2' U B2092 114.999 121.575 43.162 1.00 73.14 O
ATOM 13 C1' U B2092 115.535 120.394 41.151 1.00 73.75 C
ATOM 14 N1 U B2092 116.470 120.476 40.014 1.00 75.00 N
ATOM 15 C2 U B2092 117.832 120.372 40.272 1.00 76.77 C
ATOM 16 O2 U B2092 118.298 120.217 41.391 1.00 78.30 O
ATOM 17 N3 U B2092 118.638 120.450 39.164 1.00 77.45 N
ATOM 18 C4 U B2092 118.242 120.608 37.857 1.00 76.65 C
ATOM 19 O4 U B2092 119.099 120.630 36.968 1.00 77.30 O
ATOM 20 C5 U B2092 116.827 120.711 37.672 1.00 75.46 C
ATOM 21 C6 U B2092 116.013 120.646 38.729 1.00 74.63 C
ATOM 22 P C B2093 113.056 124.538 41.507 1.00 74.61 P
ATOM 23 OP1 C B2093 111.891 125.091 42.239 1.00 74.62 O
ATOM 24 OP2 C B2093 113.149 124.732 40.036 1.00 74.74 O
ATOM 25 O5' C B2093 114.391 125.044 42.225 1.00 76.35 O
TER
Atoms:
OP1: (120.596,127.143,51.494)
OP2: (118.953,128.972,50.741)
C3': (116.416,124.405,51.989)
C1': (116.809,123.660,49.794)
C5': (116.796,126.822,51.181)
O4': (116.361,124.991,49.673)
C8: (118.960,123.551,48.383)
O2': (117.486,122.245,51.660)
C6: (117.975,122.049,45.336)
C5: (118.218,122.631,46.607)
C4: (117.138,122.727,47.472)
P: (119.247,127.747,51.551)
C4': (116.057,125.514,50.997)
C2': (117.423,123.575,51.193)
C2: (115.778,121.788,46.012)
N1: (116.721,121.629,45.071)
N3: (115.878,122.321,47.232)
N6: (118.904,121.897,44.383)
N7: (119.364,123.156,47.195)
N9: (117.619,123.329,48.615)
O5': (118.219,126.603,51.132)
O3': (115.263,123.598,52.260)
OP2: (118.953,128.972,50.741)
C3': (116.416,124.405,51.989)
C1': (116.809,123.660,49.794)
C5': (116.796,126.822,51.181)
O4': (116.361,124.991,49.673)
C8: (118.960,123.551,48.383)
O2': (117.486,122.245,51.660)
C6: (117.975,122.049,45.336)
C5: (118.218,122.631,46.607)
C4: (117.138,122.727,47.472)
P: (119.247,127.747,51.551)
C4': (116.057,125.514,50.997)
C2': (117.423,123.575,51.193)
C2: (115.778,121.788,46.012)
N1: (116.721,121.629,45.071)
N3: (115.878,122.321,47.232)
N6: (118.904,121.897,44.383)
N7: (119.364,123.156,47.195)
N9: (117.619,123.329,48.615)
O5': (118.219,126.603,51.132)
O3': (115.263,123.598,52.260)
C4: (118.242,120.608,37.857)
N3: (118.638,120.450,39.164)
OP1: (110.373,121.661,37.650)
OP2: (112.474,121.787,36.180)
C2: (117.832,120.372,40.272)
C1': (115.535,120.394,41.151)
C3': (113.884,122.094,41.052)
O5': (112.657,121.127,38.576)
O4': (114.325,119.805,40.699)
C5': (112.185,120.584,39.821)
P: (111.719,121.139,37.282)
C4': (113.229,120.733,40.905)
C2': (115.181,121.749,41.776)
O2': (114.999,121.575,43.162)
N1: (116.470,120.476,40.014)
O4: (119.099,120.630,36.968)
O2: (118.298,120.217,41.391)
C6: (116.013,120.646,38.729)
C5: (116.827,120.711,37.672)
O3': (113.057,122.964,41.813)
N3: (118.638,120.450,39.164)
OP1: (110.373,121.661,37.650)
OP2: (112.474,121.787,36.180)
C2: (117.832,120.372,40.272)
C1': (115.535,120.394,41.151)
C3': (113.884,122.094,41.052)
O5': (112.657,121.127,38.576)
O4': (114.325,119.805,40.699)
C5': (112.185,120.584,39.821)
P: (111.719,121.139,37.282)
C4': (113.229,120.733,40.905)
C2': (115.181,121.749,41.776)
O2': (114.999,121.575,43.162)
N1: (116.470,120.476,40.014)
O4: (119.099,120.630,36.968)
O2: (118.298,120.217,41.391)
C6: (116.013,120.646,38.729)
C5: (116.827,120.711,37.672)
O3': (113.057,122.964,41.813)
Image (generated by PyMOL):