ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:955:953

Extra

PDB:
ATOM 1 O3' U A 54 65.872 12.147 113.561 1.00 77.61 O
ATOM 2 P A A 55 66.292 12.457 115.080 1.00 77.79 P
ATOM 3 OP1 A A 55 66.080 11.212 115.866 1.00 78.15 O
ATOM 4 OP2 A A 55 65.623 13.715 115.507 1.00 77.09 O
ATOM 5 O5' A A 55 67.863 12.719 114.999 1.00 74.73 O
ATOM 6 C5' A A 55 68.592 13.173 116.158 1.00 72.54 C
ATOM 7 C4' A A 55 69.740 14.068 115.747 1.00 71.22 C
ATOM 8 O4' A A 55 70.673 13.314 114.934 1.00 70.57 O
ATOM 9 C3' A A 55 69.371 15.266 114.886 1.00 70.59 C
ATOM 10 O3' A A 55 68.937 16.361 115.687 1.00 70.25 O
ATOM 11 C2' A A 55 70.681 15.559 114.167 1.00 70.22 C
ATOM 12 O2' A A 55 71.603 16.252 114.985 1.00 71.41 O
ATOM 13 C1' A A 55 71.204 14.145 113.914 1.00 68.96 C
ATOM 14 N9 A A 55 70.804 13.582 112.622 1.00 67.46 N
ATOM 15 C8 A A 55 69.861 12.606 112.395 1.00 66.82 C
ATOM 16 N7 A A 55 69.736 12.273 111.135 1.00 66.02 N
ATOM 17 C5 A A 55 70.651 13.089 110.483 1.00 65.18 C
ATOM 18 C6 A A 55 71.003 13.216 109.130 1.00 63.50 C
ATOM 19 N6 A A 55 70.463 12.482 108.154 1.00 62.66 N
ATOM 20 N1 A A 55 71.944 14.131 108.809 1.00 62.07 N
ATOM 21 C2 A A 55 72.494 14.854 109.790 1.00 62.97 C
ATOM 22 N3 A A 55 72.254 14.821 111.100 1.00 64.52 N
ATOM 23 C4 A A 55 71.309 13.908 111.385 1.00 65.81 C
ATOM 24 P A A 56 67.709 17.275 115.196 1.00 70.58 P
ATOM 25 OP1 A A 56 67.243 18.053 116.373 1.00 70.24 O
ATOM 26 OP2 A A 56 66.741 16.422 114.448 1.00 68.97 O
ATOM 27 O5' A A 56 68.373 18.278 114.150 1.00 70.36 O
TER

ATOM 1 O3' G B 52 71.891 2.370 108.853 1.00 86.34 O
ATOM 2 P A B 53 70.418 2.678 109.410 1.00 86.68 P
ATOM 3 OP1 A B 53 70.307 2.066 110.760 1.00 87.56 O
ATOM 4 OP2 A B 53 69.429 2.318 108.354 1.00 85.78 O
ATOM 5 O5' A B 53 70.408 4.260 109.594 1.00 85.95 O
ATOM 6 C5' A B 53 71.312 4.903 110.514 1.00 83.16 C
ATOM 7 C4' A B 53 71.064 6.394 110.540 1.00 82.27 C
ATOM 8 O4' A B 53 71.392 6.978 109.250 1.00 81.96 O
ATOM 9 C3' A B 53 69.630 6.833 110.774 1.00 81.22 C
ATOM 10 O3' A B 53 69.279 6.767 112.152 1.00 81.87 O
ATOM 11 C2' A B 53 69.650 8.254 110.225 1.00 80.72 C
ATOM 12 O2' A B 53 70.292 9.167 111.094 1.00 80.69 O
ATOM 13 C1' A B 53 70.537 8.082 108.993 1.00 79.83 C
ATOM 14 N9 A B 53 69.780 7.816 107.767 1.00 79.35 N
ATOM 15 C8 A B 53 69.552 6.610 107.147 1.00 78.70 C
ATOM 16 N7 A B 53 68.837 6.704 106.050 1.00 78.56 N
ATOM 17 C5 A B 53 68.572 8.063 105.940 1.00 78.68 C
ATOM 18 C6 A B 53 67.854 8.818 104.988 1.00 78.15 C
ATOM 19 N6 A B 53 67.248 8.290 103.920 1.00 76.67 N
ATOM 20 N1 A B 53 67.780 10.154 105.175 1.00 77.91 N
ATOM 21 C2 A B 53 68.386 10.688 106.246 1.00 77.92 C
ATOM 22 N3 A B 53 69.088 10.088 107.205 1.00 78.84 N
ATOM 23 C4 A B 53 69.145 8.760 106.993 1.00 79.39 C
ATOM 24 P U B 54 67.729 6.662 112.576 1.00 81.92 P
ATOM 25 OP1 U B 54 67.705 6.311 114.017 1.00 81.53 O
ATOM 26 OP2 U B 54 67.010 5.806 111.592 1.00 82.11 O
ATOM 27 O5' U B 54 67.187 8.152 112.428 1.00 82.68 O
TER

Atoms:
OP1: (66.080,11.212,115.866)
OP2: (65.623,13.715,115.507)
C3': (69.371,15.266,114.886)
C1': (71.204,14.145,113.914)
C5': (68.592,13.173,116.158)
O4': (70.673,13.314,114.934)
C8: (69.861,12.606,112.395)
O2': (71.603,16.252,114.985)
C6: (71.003,13.216,109.130)
C5: (70.651,13.089,110.483)
C4: (71.309,13.908,111.385)
P: (66.292,12.457,115.080)
C4': (69.740,14.068,115.747)
C2': (70.681,15.559,114.167)
C2: (72.494,14.854,109.790)
N1: (71.944,14.131,108.809)
N3: (72.254,14.821,111.100)
N6: (70.463,12.482,108.154)
N7: (69.736,12.273,111.135)
N9: (70.804,13.582,112.622)
O5': (67.863,12.719,114.999)
O3': (68.937,16.361,115.687)
OP1: (70.307,2.066,110.760)
OP2: (69.429,2.318,108.354)
C3': (69.630,6.833,110.774)
C1': (70.537,8.082,108.993)
C5': (71.312,4.903,110.514)
O4': (71.392,6.978,109.250)
C8: (69.552,6.610,107.147)
O2': (70.292,9.167,111.094)
C6: (67.854,8.818,104.988)
C5: (68.572,8.063,105.940)
C4: (69.145,8.760,106.993)
P: (70.418,2.678,109.410)
C4': (71.064,6.394,110.540)
C2': (69.650,8.254,110.225)
C2: (68.386,10.688,106.246)
N1: (67.780,10.154,105.175)
N3: (69.088,10.088,107.205)
N6: (67.248,8.290,103.920)
N7: (68.837,6.704,106.050)
N9: (69.780,7.816,107.767)
O5': (70.408,4.260,109.594)
O3': (69.279,6.767,112.152)
Image (generated by PyMOL):
PyMOL image
show in jmol