ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:955:953

Extra

PDB:
ATOM 1 O3' U A 54 65.849 12.084 113.225 1.00 80.00 O
ATOM 2 P A A 55 66.209 12.404 114.755 1.00 80.08 P
ATOM 3 OP1 A A 55 65.895 11.188 115.546 1.00 80.29 O
ATOM 4 OP2 A A 55 65.587 13.703 115.127 1.00 81.47 O
ATOM 5 O5' A A 55 67.790 12.587 114.752 1.00 78.46 O
ATOM 6 C5' A A 55 68.483 13.029 115.941 1.00 76.11 C
ATOM 7 C4' A A 55 69.663 13.900 115.571 1.00 74.69 C
ATOM 8 O4' A A 55 70.589 13.133 114.763 1.00 74.06 O
ATOM 9 C3' A A 55 69.341 15.120 114.723 1.00 73.93 C
ATOM 10 O3' A A 55 68.939 16.218 115.534 1.00 72.96 O
ATOM 11 C2' A A 55 70.664 15.390 114.020 1.00 73.87 C
ATOM 12 O2' A A 55 71.586 16.085 114.834 1.00 74.10 O
ATOM 13 C1' A A 55 71.165 13.967 113.771 1.00 73.02 C
ATOM 14 N9 A A 55 70.796 13.431 112.461 1.00 71.69 N
ATOM 15 C8 A A 55 69.868 12.457 112.181 1.00 70.81 C
ATOM 16 N7 A A 55 69.773 12.165 110.908 1.00 70.61 N
ATOM 17 C5 A A 55 70.696 13.007 110.304 1.00 70.69 C
ATOM 18 C6 A A 55 71.077 13.186 108.963 1.00 70.32 C
ATOM 19 N6 A A 55 70.556 12.493 107.946 1.00 69.24 N
ATOM 20 N1 A A 55 72.024 14.113 108.698 1.00 70.02 N
ATOM 21 C2 A A 55 72.545 14.808 109.720 1.00 70.24 C
ATOM 22 N3 A A 55 72.271 14.729 111.021 1.00 70.16 N
ATOM 23 C4 A A 55 71.328 13.799 111.249 1.00 71.01 C
ATOM 24 P A A 56 67.677 17.112 115.105 1.00 72.94 P
ATOM 25 OP1 A A 56 67.301 17.905 116.300 1.00 73.47 O
ATOM 26 OP2 A A 56 66.661 16.243 114.451 1.00 71.27 O
ATOM 27 O5' A A 56 68.259 18.106 114.005 1.00 72.70 O
TER

ATOM 1 O3' G B 52 71.821 2.238 108.651 1.00 86.18 O
ATOM 2 P A B 53 70.331 2.518 109.172 1.00 86.79 P
ATOM 3 OP1 A B 53 70.174 1.842 110.487 1.00 87.34 O
ATOM 4 OP2 A B 53 69.387 2.204 108.062 1.00 85.82 O
ATOM 5 O5' A B 53 70.310 4.092 109.419 1.00 87.07 O
ATOM 6 C5' A B 53 71.245 4.713 110.324 1.00 85.34 C
ATOM 7 C4' A B 53 71.055 6.212 110.330 1.00 84.04 C
ATOM 8 O4' A B 53 71.394 6.756 109.026 1.00 83.98 O
ATOM 9 C3' A B 53 69.637 6.701 110.564 1.00 83.26 C
ATOM 10 O3' A B 53 69.294 6.678 111.948 1.00 83.29 O
ATOM 11 C2' A B 53 69.691 8.104 109.973 1.00 82.76 C
ATOM 12 O2' A B 53 70.365 9.024 110.805 1.00 82.59 O
ATOM 13 C1' A B 53 70.565 7.872 108.743 1.00 82.17 C
ATOM 14 N9 A B 53 69.800 7.594 107.525 1.00 81.96 N
ATOM 15 C8 A B 53 69.585 6.384 106.909 1.00 82.07 C
ATOM 16 N7 A B 53 68.867 6.466 105.814 1.00 81.87 N
ATOM 17 C5 A B 53 68.585 7.820 105.701 1.00 82.10 C
ATOM 18 C6 A B 53 67.862 8.561 104.748 1.00 81.82 C
ATOM 19 N6 A B 53 67.272 8.022 103.679 1.00 81.15 N
ATOM 20 N1 A B 53 67.766 9.895 104.931 1.00 82.14 N
ATOM 21 C2 A B 53 68.362 10.441 106.002 1.00 82.33 C
ATOM 22 N3 A B 53 69.071 9.853 106.964 1.00 82.55 N
ATOM 23 C4 A B 53 69.148 8.527 106.753 1.00 82.39 C
ATOM 24 P U B 54 67.745 6.601 112.386 1.00 83.73 P
ATOM 25 OP1 U B 54 67.720 6.352 113.850 1.00 82.46 O
ATOM 26 OP2 U B 54 67.024 5.679 111.465 1.00 84.02 O
ATOM 27 O5' U B 54 67.204 8.079 112.140 1.00 84.28 O
TER

Atoms:
OP1: (65.895,11.188,115.546)
OP2: (65.587,13.703,115.127)
C3': (69.341,15.120,114.723)
C1': (71.165,13.967,113.771)
C5': (68.483,13.029,115.941)
O4': (70.589,13.133,114.763)
C8: (69.868,12.457,112.181)
O2': (71.586,16.085,114.834)
C6: (71.077,13.186,108.963)
C5: (70.696,13.007,110.304)
C4: (71.328,13.799,111.249)
P: (66.209,12.404,114.755)
C4': (69.663,13.900,115.571)
C2': (70.664,15.390,114.020)
C2: (72.545,14.808,109.720)
N1: (72.024,14.113,108.698)
N3: (72.271,14.729,111.021)
N6: (70.556,12.493,107.946)
N7: (69.773,12.165,110.908)
N9: (70.796,13.431,112.461)
O5': (67.790,12.587,114.752)
O3': (68.939,16.218,115.534)
OP1: (70.174,1.842,110.487)
OP2: (69.387,2.204,108.062)
C3': (69.637,6.701,110.564)
C1': (70.565,7.872,108.743)
C5': (71.245,4.713,110.324)
O4': (71.394,6.756,109.026)
C8: (69.585,6.384,106.909)
O2': (70.365,9.024,110.805)
C6: (67.862,8.561,104.748)
C5: (68.585,7.820,105.701)
C4: (69.148,8.527,106.753)
P: (70.331,2.518,109.172)
C4': (71.055,6.212,110.330)
C2': (69.691,8.104,109.973)
C2: (68.362,10.441,106.002)
N1: (67.766,9.895,104.931)
N3: (69.071,9.853,106.964)
N6: (67.272,8.022,103.679)
N7: (68.867,6.466,105.814)
N9: (69.800,7.594,107.525)
O5': (70.310,4.092,109.419)
O3': (69.294,6.678,111.948)
Image (generated by PyMOL):
PyMOL image
show in jmol