Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:955:953
Extra
PDB:
ATOM 1 O3' U A 54 65.883 12.033 113.345 1.00 83.45 O
ATOM 2 P A A 55 66.279 12.374 114.862 1.00 82.59 P
ATOM 3 OP1 A A 55 66.037 11.156 115.676 1.00 83.00 O
ATOM 4 OP2 A A 55 65.611 13.647 115.239 1.00 83.81 O
ATOM 5 O5' A A 55 67.852 12.618 114.792 1.00 80.88 O
ATOM 6 C5' A A 55 68.577 13.100 115.941 1.00 79.34 C
ATOM 7 C4' A A 55 69.699 14.019 115.511 1.00 77.90 C
ATOM 8 O4' A A 55 70.641 13.276 114.704 1.00 77.30 O
ATOM 9 C3' A A 55 69.297 15.190 114.632 1.00 77.69 C
ATOM 10 O3' A A 55 68.831 16.284 115.411 1.00 77.42 O
ATOM 11 C2' A A 55 70.593 15.508 113.901 1.00 77.22 C
ATOM 12 O2' A A 55 71.503 16.252 114.684 1.00 77.43 O
ATOM 13 C1' A A 55 71.157 14.106 113.679 1.00 76.46 C
ATOM 14 N9 A A 55 70.782 13.514 112.397 1.00 76.14 N
ATOM 15 C8 A A 55 69.876 12.504 112.180 1.00 76.05 C
ATOM 16 N7 A A 55 69.772 12.148 110.924 1.00 76.23 N
ATOM 17 C5 A A 55 70.661 12.986 110.266 1.00 75.75 C
ATOM 18 C6 A A 55 71.022 13.105 108.914 1.00 75.21 C
ATOM 19 N6 A A 55 70.516 12.341 107.941 1.00 75.16 N
ATOM 20 N1 A A 55 71.935 14.045 108.590 1.00 74.90 N
ATOM 21 C2 A A 55 72.447 14.803 109.566 1.00 75.32 C
ATOM 22 N3 A A 55 72.193 14.782 110.871 1.00 75.42 N
ATOM 23 C4 A A 55 71.281 13.840 111.160 1.00 75.75 C
ATOM 24 P A A 56 67.513 17.081 114.959 1.00 77.61 P
ATOM 25 OP1 A A 56 67.050 17.868 116.130 1.00 78.45 O
ATOM 26 OP2 A A 56 66.578 16.130 114.297 1.00 77.46 O
ATOM 27 O5' A A 56 68.038 18.087 113.844 1.00 77.10 O
TER
ATOM 1 O3' G B 52 71.924 2.273 108.668 1.00 95.43 O
ATOM 2 P A B 53 70.445 2.610 109.194 1.00 96.29 P
ATOM 3 OP1 A B 53 70.277 1.986 110.534 1.00 97.26 O
ATOM 4 OP2 A B 53 69.489 2.280 108.101 1.00 95.69 O
ATOM 5 O5' A B 53 70.459 4.192 109.384 1.00 96.09 O
ATOM 6 C5' A B 53 71.392 4.828 110.283 1.00 93.83 C
ATOM 7 C4' A B 53 71.159 6.324 110.313 1.00 92.52 C
ATOM 8 O4' A B 53 71.497 6.914 109.027 1.00 91.87 O
ATOM 9 C3' A B 53 69.723 6.760 110.543 1.00 91.40 C
ATOM 10 O3' A B 53 69.376 6.698 111.921 1.00 90.81 O
ATOM 11 C2' A B 53 69.730 8.175 109.979 1.00 90.61 C
ATOM 12 O2' A B 53 70.368 9.101 110.834 1.00 91.41 O
ATOM 13 C1' A B 53 70.618 7.994 108.751 1.00 90.58 C
ATOM 14 N9 A B 53 69.855 7.678 107.544 1.00 90.59 N
ATOM 15 C8 A B 53 69.620 6.444 106.982 1.00 90.68 C
ATOM 16 N7 A B 53 68.901 6.489 105.885 1.00 90.88 N
ATOM 17 C5 A B 53 68.642 7.842 105.711 1.00 90.71 C
ATOM 18 C6 A B 53 67.925 8.552 104.725 1.00 90.12 C
ATOM 19 N6 A B 53 67.319 7.974 103.684 1.00 88.85 N
ATOM 20 N1 A B 53 67.852 9.896 104.850 1.00 90.33 N
ATOM 21 C2 A B 53 68.464 10.479 105.895 1.00 90.36 C
ATOM 22 N3 A B 53 69.167 9.923 106.881 1.00 90.17 N
ATOM 23 C4 A B 53 69.220 8.586 106.729 1.00 90.92 C
ATOM 24 P U B 54 67.832 6.550 112.348 1.00 90.90 P
ATOM 25 OP1 U B 54 67.836 6.160 113.781 1.00 89.66 O
ATOM 26 OP2 U B 54 67.124 5.694 111.347 1.00 90.30 O
ATOM 27 O5' U B 54 67.260 8.034 112.232 1.00 89.95 O
TER
ATOM 2 P A A 55 66.279 12.374 114.862 1.00 82.59 P
ATOM 3 OP1 A A 55 66.037 11.156 115.676 1.00 83.00 O
ATOM 4 OP2 A A 55 65.611 13.647 115.239 1.00 83.81 O
ATOM 5 O5' A A 55 67.852 12.618 114.792 1.00 80.88 O
ATOM 6 C5' A A 55 68.577 13.100 115.941 1.00 79.34 C
ATOM 7 C4' A A 55 69.699 14.019 115.511 1.00 77.90 C
ATOM 8 O4' A A 55 70.641 13.276 114.704 1.00 77.30 O
ATOM 9 C3' A A 55 69.297 15.190 114.632 1.00 77.69 C
ATOM 10 O3' A A 55 68.831 16.284 115.411 1.00 77.42 O
ATOM 11 C2' A A 55 70.593 15.508 113.901 1.00 77.22 C
ATOM 12 O2' A A 55 71.503 16.252 114.684 1.00 77.43 O
ATOM 13 C1' A A 55 71.157 14.106 113.679 1.00 76.46 C
ATOM 14 N9 A A 55 70.782 13.514 112.397 1.00 76.14 N
ATOM 15 C8 A A 55 69.876 12.504 112.180 1.00 76.05 C
ATOM 16 N7 A A 55 69.772 12.148 110.924 1.00 76.23 N
ATOM 17 C5 A A 55 70.661 12.986 110.266 1.00 75.75 C
ATOM 18 C6 A A 55 71.022 13.105 108.914 1.00 75.21 C
ATOM 19 N6 A A 55 70.516 12.341 107.941 1.00 75.16 N
ATOM 20 N1 A A 55 71.935 14.045 108.590 1.00 74.90 N
ATOM 21 C2 A A 55 72.447 14.803 109.566 1.00 75.32 C
ATOM 22 N3 A A 55 72.193 14.782 110.871 1.00 75.42 N
ATOM 23 C4 A A 55 71.281 13.840 111.160 1.00 75.75 C
ATOM 24 P A A 56 67.513 17.081 114.959 1.00 77.61 P
ATOM 25 OP1 A A 56 67.050 17.868 116.130 1.00 78.45 O
ATOM 26 OP2 A A 56 66.578 16.130 114.297 1.00 77.46 O
ATOM 27 O5' A A 56 68.038 18.087 113.844 1.00 77.10 O
TER
ATOM 1 O3' G B 52 71.924 2.273 108.668 1.00 95.43 O
ATOM 2 P A B 53 70.445 2.610 109.194 1.00 96.29 P
ATOM 3 OP1 A B 53 70.277 1.986 110.534 1.00 97.26 O
ATOM 4 OP2 A B 53 69.489 2.280 108.101 1.00 95.69 O
ATOM 5 O5' A B 53 70.459 4.192 109.384 1.00 96.09 O
ATOM 6 C5' A B 53 71.392 4.828 110.283 1.00 93.83 C
ATOM 7 C4' A B 53 71.159 6.324 110.313 1.00 92.52 C
ATOM 8 O4' A B 53 71.497 6.914 109.027 1.00 91.87 O
ATOM 9 C3' A B 53 69.723 6.760 110.543 1.00 91.40 C
ATOM 10 O3' A B 53 69.376 6.698 111.921 1.00 90.81 O
ATOM 11 C2' A B 53 69.730 8.175 109.979 1.00 90.61 C
ATOM 12 O2' A B 53 70.368 9.101 110.834 1.00 91.41 O
ATOM 13 C1' A B 53 70.618 7.994 108.751 1.00 90.58 C
ATOM 14 N9 A B 53 69.855 7.678 107.544 1.00 90.59 N
ATOM 15 C8 A B 53 69.620 6.444 106.982 1.00 90.68 C
ATOM 16 N7 A B 53 68.901 6.489 105.885 1.00 90.88 N
ATOM 17 C5 A B 53 68.642 7.842 105.711 1.00 90.71 C
ATOM 18 C6 A B 53 67.925 8.552 104.725 1.00 90.12 C
ATOM 19 N6 A B 53 67.319 7.974 103.684 1.00 88.85 N
ATOM 20 N1 A B 53 67.852 9.896 104.850 1.00 90.33 N
ATOM 21 C2 A B 53 68.464 10.479 105.895 1.00 90.36 C
ATOM 22 N3 A B 53 69.167 9.923 106.881 1.00 90.17 N
ATOM 23 C4 A B 53 69.220 8.586 106.729 1.00 90.92 C
ATOM 24 P U B 54 67.832 6.550 112.348 1.00 90.90 P
ATOM 25 OP1 U B 54 67.836 6.160 113.781 1.00 89.66 O
ATOM 26 OP2 U B 54 67.124 5.694 111.347 1.00 90.30 O
ATOM 27 O5' U B 54 67.260 8.034 112.232 1.00 89.95 O
TER
Atoms:
OP1: (66.037,11.156,115.676)
OP2: (65.611,13.647,115.239)
C3': (69.297,15.190,114.632)
C1': (71.157,14.106,113.679)
C5': (68.577,13.100,115.941)
O4': (70.641,13.276,114.704)
C8: (69.876,12.504,112.180)
O2': (71.503,16.252,114.684)
C6: (71.022,13.105,108.914)
C5: (70.661,12.986,110.266)
C4: (71.281,13.840,111.160)
P: (66.279,12.374,114.862)
C4': (69.699,14.019,115.511)
C2': (70.593,15.508,113.901)
C2: (72.447,14.803,109.566)
N1: (71.935,14.045,108.590)
N3: (72.193,14.782,110.871)
N6: (70.516,12.341,107.941)
N7: (69.772,12.148,110.924)
N9: (70.782,13.514,112.397)
O5': (67.852,12.618,114.792)
O3': (68.831,16.284,115.411)
OP2: (65.611,13.647,115.239)
C3': (69.297,15.190,114.632)
C1': (71.157,14.106,113.679)
C5': (68.577,13.100,115.941)
O4': (70.641,13.276,114.704)
C8: (69.876,12.504,112.180)
O2': (71.503,16.252,114.684)
C6: (71.022,13.105,108.914)
C5: (70.661,12.986,110.266)
C4: (71.281,13.840,111.160)
P: (66.279,12.374,114.862)
C4': (69.699,14.019,115.511)
C2': (70.593,15.508,113.901)
C2: (72.447,14.803,109.566)
N1: (71.935,14.045,108.590)
N3: (72.193,14.782,110.871)
N6: (70.516,12.341,107.941)
N7: (69.772,12.148,110.924)
N9: (70.782,13.514,112.397)
O5': (67.852,12.618,114.792)
O3': (68.831,16.284,115.411)
OP1: (70.277,1.986,110.534)
OP2: (69.489,2.280,108.101)
C3': (69.723,6.760,110.543)
C1': (70.618,7.994,108.751)
C5': (71.392,4.828,110.283)
O4': (71.497,6.914,109.027)
C8: (69.620,6.444,106.982)
O2': (70.368,9.101,110.834)
C6: (67.925,8.552,104.725)
C5: (68.642,7.842,105.711)
C4: (69.220,8.586,106.729)
P: (70.445,2.610,109.194)
C4': (71.159,6.324,110.313)
C2': (69.730,8.175,109.979)
C2: (68.464,10.479,105.895)
N1: (67.852,9.896,104.850)
N3: (69.167,9.923,106.881)
N6: (67.319,7.974,103.684)
N7: (68.901,6.489,105.885)
N9: (69.855,7.678,107.544)
O5': (70.459,4.192,109.384)
O3': (69.376,6.698,111.921)
OP2: (69.489,2.280,108.101)
C3': (69.723,6.760,110.543)
C1': (70.618,7.994,108.751)
C5': (71.392,4.828,110.283)
O4': (71.497,6.914,109.027)
C8: (69.620,6.444,106.982)
O2': (70.368,9.101,110.834)
C6: (67.925,8.552,104.725)
C5: (68.642,7.842,105.711)
C4: (69.220,8.586,106.729)
P: (70.445,2.610,109.194)
C4': (71.159,6.324,110.313)
C2': (69.730,8.175,109.979)
C2: (68.464,10.479,105.895)
N1: (67.852,9.896,104.850)
N3: (69.167,9.923,106.881)
N6: (67.319,7.974,103.684)
N7: (68.901,6.489,105.885)
N9: (69.855,7.678,107.544)
O5': (70.459,4.192,109.384)
O3': (69.376,6.698,111.921)
Image (generated by PyMOL):